RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ERBB3P21860 1342 aa20.02■□□□□ 0.8
COMMD4-210ENST00000564587 EXOC6Q8TAG9 804 aa20.02■□□□□ 0.8
COMMD4-210ENST00000564587 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.8
COMMD4-210ENST00000564587 COL18A1P39060 1754 aa20.02■□□□□ 0.8
COMMD4-210ENST00000564587 MAP3K5Q99683 1374 aa20.01■□□□□ 0.79
COMMD4-210ENST00000564587 CHL1O00533 1208 aa20.01■□□□□ 0.79
COMMD4-210ENST00000564587 AAMPQ13685 434 aa20.01■□□□□ 0.79
COMMD4-210ENST00000564587 THUMPD2Q9BTF0 503 aaKnown RBP20.01■□□□□ 0.79
COMMD4-210ENST00000564587 MBIPQ9NS73 344 aa20.01■□□□□ 0.79
COMMD4-210ENST00000564587 FAM83GA6ND36 823 aa20■□□□□ 0.79
COMMD4-210ENST00000564587 BRPF1P55201 1214 aaPredicted RBP20■□□□□ 0.79
COMMD4-210ENST00000564587 CRBNQ96SW2 442 aa20■□□□□ 0.79
COMMD4-210ENST00000564587 IPO8O15397 1037 aaKnown RBP19.99■□□□□ 0.79
COMMD4-210ENST00000564587 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
COMMD4-210ENST00000564587 AXIN2Q9Y2T1 843 aa19.99■□□□□ 0.79
COMMD4-210ENST00000564587 CRB1P82279 1406 aa19.99■□□□□ 0.79
COMMD4-210ENST00000564587 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
COMMD4-210ENST00000564587 RGPD2P0DJD1 1756 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 KIAA0232Q92628 1395 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 LMO7Q8WWI1 1683 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 MCM10Q7L590 875 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 LRRC59Q96AG4 307 aaKnown RBP19.98■□□□□ 0.79
COMMD4-210ENST00000564587 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
COMMD4-210ENST00000564587 RGPD5Q99666 1765 aa19.98■□□□□ 0.79
COMMD4-210ENST00000564587 ZKSCAN2Q63HK3 967 aa19.97■□□□□ 0.79
COMMD4-210ENST00000564587 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
COMMD4-210ENST00000564587 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
COMMD4-210ENST00000564587 VAMP4O75379 141 aa19.96■□□□□ 0.79
COMMD4-210ENST00000564587 AKAP4Q5JQC9 854 aa19.96■□□□□ 0.79
COMMD4-210ENST00000564587 SOS1Q07889 1333 aaPredicted RBP19.96■□□□□ 0.79
COMMD4-210ENST00000564587 LRRC37A3O60309 1634 aa19.95■□□□□ 0.78
COMMD4-210ENST00000564587 TWISTNBQ3B726 338 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-210ENST00000564587 C20orf194Q5TEA3 1177 aa19.95■□□□□ 0.78
COMMD4-210ENST00000564587 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
COMMD4-210ENST00000564587 FRAT1Q92837 279 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-210ENST00000564587 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
COMMD4-210ENST00000564587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.95■□□□□ 0.78
COMMD4-210ENST00000564587 OVOS2A0A0G2JMS6 1433 aa19.94■□□□□ 0.78
COMMD4-210ENST00000564587 ROBO1Q9Y6N7 1651 aa19.94■□□□□ 0.78
COMMD4-210ENST00000564587 CSB-PGBD3P0DP91 1061 aa19.94■□□□□ 0.78
COMMD4-210ENST00000564587 RAPGEF4Q8WZA2 1011 aa19.94■□□□□ 0.78
COMMD4-210ENST00000564587 NLRP2Q9NX02 1062 aa19.94■□□□□ 0.78
COMMD4-210ENST00000564587 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
COMMD4-210ENST00000564587 C1orf141Q5JVX7 400 aa19.93■□□□□ 0.78
COMMD4-210ENST00000564587 TATP17735 454 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-210ENST00000564587 TAF7Q15545 349 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-210ENST00000564587 ZNF530Q6P9A1 599 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-210ENST00000564587 ARHGAP45Q92619 1136 aa19.92■□□□□ 0.78
COMMD4-210ENST00000564587 RGS17Q9UGC6 210 aaPredicted RBP19.92■□□□□ 0.78
COMMD4-210ENST00000564587 TSPYL4Q9UJ04 414 aa19.92■□□□□ 0.78
COMMD4-210ENST00000564587 CHMP4AQ9BY43 222 aa19.91■□□□□ 0.78
COMMD4-210ENST00000564587 CEMIPQ8WUJ3 1361 aa19.91■□□□□ 0.78
COMMD4-210ENST00000564587 CHRNA2Q15822 529 aa19.9■□□□□ 0.78
COMMD4-210ENST00000564587 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
COMMD4-210ENST00000564587 DZIP1LQ8IYY4 767 aaKnown RBP19.9■□□□□ 0.78
COMMD4-210ENST00000564587 IL17REQ8NFR9 667 aa19.9■□□□□ 0.78
COMMD4-210ENST00000564587 BCL2L13Q9BXK5 485 aa19.9■□□□□ 0.78
COMMD4-210ENST00000564587 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
COMMD4-210ENST00000564587 FTSJ3Q8IY81 847 aaKnown RBP19.89■□□□□ 0.77
COMMD4-210ENST00000564587 WDR17Q8IZU2 1322 aa19.89■□□□□ 0.77
COMMD4-210ENST00000564587 C8orf58Q8NAV2 365 aa19.89■□□□□ 0.77
COMMD4-210ENST00000564587 COL22A1Q8NFW1 1626 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-210ENST00000564587 MRPL50Q8N5N7 158 aaKnown RBP19.88■□□□□ 0.77
COMMD4-210ENST00000564587 CHMP4BQ9H444 224 aaKnown RBP19.88■□□□□ 0.77
COMMD4-210ENST00000564587 TSPYL6Q8N831 410 aa19.87■□□□□ 0.77
COMMD4-210ENST00000564587 NOB1Q9ULX3 412 aaKnown RBP19.87■□□□□ 0.77
COMMD4-210ENST00000564587 PANK1Q8TE04 598 aa19.86■□□□□ 0.77
COMMD4-210ENST00000564587 TEFQ10587 303 aa19.85■□□□□ 0.77
COMMD4-210ENST00000564587 API5Q9BZZ5 524 aaKnown RBP19.85■□□□□ 0.77
COMMD4-210ENST00000564587 COG6Q9Y2V7 657 aa19.85■□□□□ 0.77
COMMD4-210ENST00000564587 COL5A2P05997 1499 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-210ENST00000564587 ELL2O00472 640 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-210ENST00000564587 RNMTO43148 476 aaKnown RBP19.84■□□□□ 0.77
COMMD4-210ENST00000564587 HSP90AB1P08238 724 aaKnown RBP19.84■□□□□ 0.77
COMMD4-210ENST00000564587 TRIM27P14373 513 aa19.84■□□□□ 0.77
COMMD4-210ENST00000564587 MVPQ14764 893 aaKnown RBP19.84■□□□□ 0.77
COMMD4-210ENST00000564587 CLUAP1Q96AJ1 413 aa19.84■□□□□ 0.77
COMMD4-210ENST00000564587 CARD10Q9BWT7 1032 aa19.84■□□□□ 0.77
COMMD4-210ENST00000564587 DDX19BQ9UMR2 479 aa19.84■□□□□ 0.77
COMMD4-210ENST00000564587 EVA1CP58658 441 aa19.83■□□□□ 0.77
COMMD4-210ENST00000564587 TOM1L2Q6ZVM7 507 aa19.83■□□□□ 0.77
COMMD4-210ENST00000564587 ADAMTS7Q9UKP4 1686 aa19.82■□□□□ 0.76
COMMD4-210ENST00000564587 HOXB7P09629 217 aa19.82■□□□□ 0.76
COMMD4-210ENST00000564587 CENPQQ7L2Z9 268 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-210ENST00000564587 IFNL2Q8IZJ0 200 aa19.82■□□□□ 0.76
COMMD4-210ENST00000564587 COL14A1Q05707 1796 aaKnown RBP19.82■□□□□ 0.76
COMMD4-210ENST00000564587 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
COMMD4-210ENST00000564587 POTEAQ6S8J7 498 aa19.81■□□□□ 0.76
COMMD4-210ENST00000564587 PKD1L3Q7Z443 1732 aa19.81■□□□□ 0.76
COMMD4-210ENST00000564587 PARP4Q9UKK3 1724 aaKnown RBP19.81■□□□□ 0.76
COMMD4-210ENST00000564587 CACNA1FO60840 1977 aa19.81■□□□□ 0.76
COMMD4-210ENST00000564587 PTPRCP08575 1304 aa19.8■□□□□ 0.76
COMMD4-210ENST00000564587 RLBP1P12271 317 aa19.8■□□□□ 0.76
COMMD4-210ENST00000564587 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
COMMD4-210ENST00000564587 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
COMMD4-210ENST00000564587 MEGF6O75095 1541 aa19.8■□□□□ 0.76
COMMD4-210ENST00000564587 VIRMAQ69YN4 1812 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms