RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 NSD2O96028 1365 aa19.83■□□□□ 0.76
CDR2-204ENST00000564542 CHD4Q14839 1912 aa19.82■□□□□ 0.76
CDR2-204ENST00000564542 SLC16A10Q8TF71 515 aa19.81■□□□□ 0.76
CDR2-204ENST00000564542 SYTL4Q96C24 671 aaPredicted RBP19.81■□□□□ 0.76
CDR2-204ENST00000564542 PNPLA7Q6ZV29 1317 aa19.8■□□□□ 0.76
CDR2-204ENST00000564542 FBLN1P23142 703 aa19.8■□□□□ 0.76
CDR2-204ENST00000564542 PRIM1P49642 420 aaKnown RBP19.8■□□□□ 0.76
CDR2-204ENST00000564542 ZNF784Q8NCA9 323 aaPredicted RBP19.8■□□□□ 0.76
CDR2-204ENST00000564542 KIF20BQ96Q89 1820 aa19.79■□□□□ 0.76
CDR2-204ENST00000564542 SMG6Q86US8 1419 aaKnown RBP19.79■□□□□ 0.76
CDR2-204ENST00000564542 ZCRB1Q8TBF4 217 aaKnown RBP19.79■□□□□ 0.76
CDR2-204ENST00000564542 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.76
CDR2-204ENST00000564542 POLD1P28340 1107 aa19.77■□□□□ 0.76
CDR2-204ENST00000564542 TMF1P82094 1093 aa19.77■□□□□ 0.76
CDR2-204ENST00000564542 RRS1Q15050 365 aaKnown RBP19.77■□□□□ 0.76
CDR2-204ENST00000564542 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
CDR2-204ENST00000564542 USP47Q96K76 1375 aa19.77■□□□□ 0.76
CDR2-204ENST00000564542 FYB1O15117 783 aa19.76■□□□□ 0.75
CDR2-204ENST00000564542 KCNQ4P56696 695 aa19.76■□□□□ 0.75
CDR2-204ENST00000564542 NBPF6Q5VWK0 638 aa19.76■□□□□ 0.75
CDR2-204ENST00000564542 NBPF4Q96M43 638 aa19.76■□□□□ 0.75
CDR2-204ENST00000564542 GGNBP2Q9H3C7 697 aa19.75■□□□□ 0.75
CDR2-204ENST00000564542 CCNL1Q9UK58 526 aaPredicted RBP19.74■□□□□ 0.75
CDR2-204ENST00000564542 INSRP06213 1382 aa19.73■□□□□ 0.75
CDR2-204ENST00000564542 KIF24Q5T7B8 1368 aa19.73■□□□□ 0.75
CDR2-204ENST00000564542 C5P01031 1676 aa19.73■□□□□ 0.75
CDR2-204ENST00000564542 USHBP1Q8N6Y0 703 aa19.73■□□□□ 0.75
CDR2-204ENST00000564542 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
CDR2-204ENST00000564542 FLT4P35916 1363 aa19.72■□□□□ 0.75
CDR2-204ENST00000564542 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
CDR2-204ENST00000564542 GOLGB1Q14789 3259 aaKnown RBP19.72■□□□□ 0.75
CDR2-204ENST00000564542 GPR162Q16538 588 aa19.71■□□□□ 0.75
CDR2-204ENST00000564542 PCDH11XQ9BZA7 1347 aa19.71■□□□□ 0.75
CDR2-204ENST00000564542 PCDH11YQ9BZA8 1340 aa19.71■□□□□ 0.75
CDR2-204ENST00000564542 TATP17735 454 aaPredicted RBP19.7■□□□□ 0.74
CDR2-204ENST00000564542 CDCA8Q53HL2 280 aa19.7■□□□□ 0.74
CDR2-204ENST00000564542 PKD1L3Q7Z443 1732 aa19.69■□□□□ 0.74
CDR2-204ENST00000564542 HSP90AB2PQ58FF8 381 aa19.69■□□□□ 0.74
CDR2-204ENST00000564542 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
CDR2-204ENST00000564542 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
CDR2-204ENST00000564542 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
CDR2-204ENST00000564542 NLGN2Q8NFZ4 835 aa19.67■□□□□ 0.74
CDR2-204ENST00000564542 COL23A1Q86Y22 540 aaPredicted RBP19.66■□□□□ 0.74
CDR2-204ENST00000564542 PALLDQ8WX93 1383 aa19.66■□□□□ 0.74
CDR2-204ENST00000564542 MSH5O43196 834 aa19.65■□□□□ 0.74
CDR2-204ENST00000564542 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
CDR2-204ENST00000564542 NCAPD2Q15021 1401 aa19.65■□□□□ 0.74
CDR2-204ENST00000564542 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
CDR2-204ENST00000564542 ITGB4P16144 1822 aa19.65■□□□□ 0.74
CDR2-204ENST00000564542 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
CDR2-204ENST00000564542 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
CDR2-204ENST00000564542 CYP27B1O15528 508 aa19.63■□□□□ 0.73
CDR2-204ENST00000564542 MPRIPQ6WCQ1 1025 aa19.62■□□□□ 0.73
CDR2-204ENST00000564542 CARD14Q9BXL6 1004 aa19.62■□□□□ 0.73
CDR2-204ENST00000564542 EMILIN1Q9Y6C2 1016 aa19.62■□□□□ 0.73
CDR2-204ENST00000564542 C1QTNF8P60827 252 aa19.61■□□□□ 0.73
CDR2-204ENST00000564542 FLAD1Q8NFF5 587 aa19.61■□□□□ 0.73
CDR2-204ENST00000564542 MSL1Q68DK7 614 aa19.6■□□□□ 0.73
CDR2-204ENST00000564542 GRIN3BO60391 1043 aa19.59■□□□□ 0.73
CDR2-204ENST00000564542 YBX3P16989 372 aaKnown RBP eCLIP19.59■□□□□ 0.73
CDR2-204ENST00000564542 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
CDR2-204ENST00000564542 UBR3Q6ZT12 1888 aa19.58■□□□□ 0.73
CDR2-204ENST00000564542 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.72
CDR2-204ENST00000564542 SENP3-EIF4A1A0A087X0R7 540 aa19.57■□□□□ 0.72
CDR2-204ENST00000564542 NKX1-1Q15270 411 aaPredicted RBP19.57■□□□□ 0.72
CDR2-204ENST00000564542 MAP2P11137 1827 aaKnown RBP19.57■□□□□ 0.72
CDR2-204ENST00000564542 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
CDR2-204ENST00000564542 PPM1GO15355 546 aaPredicted RBP19.56■□□□□ 0.72
CDR2-204ENST00000564542 GIGYF1O75420 1035 aaPredicted RBP19.56■□□□□ 0.72
CDR2-204ENST00000564542 AK7Q96M32 723 aa19.56■□□□□ 0.72
CDR2-204ENST00000564542 SPG7Q9UQ90 795 aa19.56■□□□□ 0.72
CDR2-204ENST00000564542 CD2APQ9Y5K6 639 aa19.56■□□□□ 0.72
CDR2-204ENST00000564542 PIGBQ92521 554 aa19.55■□□□□ 0.72
CDR2-204ENST00000564542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.54■□□□□ 0.721e-8■□□□□ 9.8
CDR2-204ENST00000564542 TIMELESSQ9UNS1 1208 aa19.54■□□□□ 0.72
CDR2-204ENST00000564542 AMIGO3Q86WK7 504 aa19.53■□□□□ 0.72
CDR2-204ENST00000564542 EYA1Q99502 592 aa19.52■□□□□ 0.72
CDR2-204ENST00000564542 PLEKHG2Q9H7P9 1386 aa19.52■□□□□ 0.72
CDR2-204ENST00000564542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
CDR2-204ENST00000564542 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
CDR2-204ENST00000564542 SSFA2P28290 1259 aa19.51■□□□□ 0.71
CDR2-204ENST00000564542 SIK1P57059 783 aa19.51■□□□□ 0.71
CDR2-204ENST00000564542 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
CDR2-204ENST00000564542 PHF14O94880 888 aa19.5■□□□□ 0.71
CDR2-204ENST00000564542 POLKQ9UBT6 870 aa19.5■□□□□ 0.71
CDR2-204ENST00000564542 PHKG2P15735 406 aa19.49■□□□□ 0.71
CDR2-204ENST00000564542 IFNL2Q8IZJ0 200 aa19.49■□□□□ 0.71
CDR2-204ENST00000564542 LINC00116Q8NCU8 138 aa19.49■□□□□ 0.71
CDR2-204ENST00000564542 ATP10DQ9P241 1426 aa19.49■□□□□ 0.71
CDR2-204ENST00000564542 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
CDR2-204ENST00000564542 ASAP1Q9ULH1 1129 aa19.47■□□□□ 0.71
CDR2-204ENST00000564542 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
CDR2-204ENST00000564542 ADCY9O60503 1353 aa19.46■□□□□ 0.71
CDR2-204ENST00000564542 ITPK1Q13572 414 aa19.46■□□□□ 0.71
CDR2-204ENST00000564542 EIF4A2Q14240 407 aaKnown RBP19.46■□□□□ 0.71
CDR2-204ENST00000564542 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
CDR2-204ENST00000564542 CLSPNQ9HAW4 1339 aa19.46■□□□□ 0.71
CDR2-204ENST00000564542 GNPATO15228 680 aa19.45■□□□□ 0.7
CDR2-204ENST00000564542 ATP6V1AP38606 617 aa19.45■□□□□ 0.7
CDR2-204ENST00000564542 KDRP35968 1356 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms