RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 KLHL34Q8N239 644 aa19.45■□□□□ 0.7
KNOP1-202ENST00000564480 NLGN2Q8NFZ4 835 aa19.45■□□□□ 0.7
KNOP1-202ENST00000564480 ZCRB1Q8TBF4 217 aaKnown RBP19.45■□□□□ 0.7
KNOP1-202ENST00000564480 NBPF4Q96M43 638 aa19.45■□□□□ 0.7
KNOP1-202ENST00000564480 TFCP2L1Q9NZI6 479 aa19.45■□□□□ 0.7
KNOP1-202ENST00000564480 SHANK3Q9BYB0 1731 aa19.45■□□□□ 0.7
KNOP1-202ENST00000564480 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
KNOP1-202ENST00000564480 RRS1Q15050 365 aaKnown RBP19.44■□□□□ 0.7
KNOP1-202ENST00000564480 GPR162Q16538 588 aa19.44■□□□□ 0.7
KNOP1-202ENST00000564480 COL24A1Q17RW2 1714 aa19.44■□□□□ 0.7
KNOP1-202ENST00000564480 DOT1LQ8TEK3 1739 aa19.43■□□□□ 0.7
KNOP1-202ENST00000564480 USHBP1Q8N6Y0 703 aa19.43■□□□□ 0.7
KNOP1-202ENST00000564480 TUBGCP6Q96RT7 1819 aa19.43■□□□□ 0.7
KNOP1-202ENST00000564480 QSER1Q2KHR3 1735 aa19.42■□□□□ 0.7
KNOP1-202ENST00000564480 FYB1O15117 783 aa19.42■□□□□ 0.7
KNOP1-202ENST00000564480 CHD4Q14839 1912 aa19.42■□□□□ 0.7
KNOP1-202ENST00000564480 POLD1P28340 1107 aa19.41■□□□□ 0.7
KNOP1-202ENST00000564480 C1QTNF8P60827 252 aa19.41■□□□□ 0.7
KNOP1-202ENST00000564480 COL23A1Q86Y22 540 aaPredicted RBP19.41■□□□□ 0.7
KNOP1-202ENST00000564480 GGNBP2Q9H3C7 697 aa19.41■□□□□ 0.7
KNOP1-202ENST00000564480 CCNL1Q9UK58 526 aaPredicted RBP19.41■□□□□ 0.7
KNOP1-202ENST00000564480 LY75O60449 1722 aa19.4■□□□□ 0.7
KNOP1-202ENST00000564480 PELP1Q8IZL8 1130 aaKnown RBP19.39■□□□□ 0.69
KNOP1-202ENST00000564480 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
KNOP1-202ENST00000564480 YBX3P16989 372 aaKnown RBP eCLIP19.37■□□□□ 0.69
KNOP1-202ENST00000564480 HSP90AB2PQ58FF8 381 aa19.37■□□□□ 0.69
KNOP1-202ENST00000564480 RTL1A6NKG5 1358 aa19.36■□□□□ 0.69
KNOP1-202ENST00000564480 MSL1Q68DK7 614 aa19.36■□□□□ 0.69
KNOP1-202ENST00000564480 USP47Q96K76 1375 aa19.34■□□□□ 0.69
KNOP1-202ENST00000564480 MSH5O43196 834 aa19.34■□□□□ 0.69
KNOP1-202ENST00000564480 GOLGB1Q14789 3259 aaKnown RBP19.33■□□□□ 0.69
KNOP1-202ENST00000564480 AMIGO3Q86WK7 504 aa19.33■□□□□ 0.68
KNOP1-202ENST00000564480 RAPGEF4Q8WZA2 1011 aa19.33■□□□□ 0.68
KNOP1-202ENST00000564480 CYP27B1O15528 508 aa19.32■□□□□ 0.68
KNOP1-202ENST00000564480 SMIM5Q71RC9 77 aa19.32■□□□□ 0.68
KNOP1-202ENST00000564480 INSRP06213 1382 aa19.32■□□□□ 0.68
KNOP1-202ENST00000564480 CGNL1Q0VF96 1302 aa19.31■□□□□ 0.68
KNOP1-202ENST00000564480 TATP17735 454 aaPredicted RBP19.31■□□□□ 0.68
KNOP1-202ENST00000564480 CARD14Q9BXL6 1004 aa19.31■□□□□ 0.68
KNOP1-202ENST00000564480 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
KNOP1-202ENST00000564480 SLC24A1O60721 1099 aa19.29■□□□□ 0.68
KNOP1-202ENST00000564480 TMF1P82094 1093 aa19.29■□□□□ 0.68
KNOP1-202ENST00000564480 PALLDQ8WX93 1383 aa19.29■□□□□ 0.68
KNOP1-202ENST00000564480 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
KNOP1-202ENST00000564480 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
KNOP1-202ENST00000564480 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
KNOP1-202ENST00000564480 GIGYF1O75420 1035 aaPredicted RBP19.27■□□□□ 0.68
KNOP1-202ENST00000564480 FLT4P35916 1363 aa19.27■□□□□ 0.68
KNOP1-202ENST00000564480 C5P01031 1676 aa19.27■□□□□ 0.67
KNOP1-202ENST00000564480 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
KNOP1-202ENST00000564480 TOGARAM1Q9Y4F4 1720 aa19.26■□□□□ 0.67
KNOP1-202ENST00000564480 GRIN3BO60391 1043 aa19.25■□□□□ 0.67
KNOP1-202ENST00000564480 PIGBQ92521 554 aa19.25■□□□□ 0.67
KNOP1-202ENST00000564480 TAF1LQ8IZX4 1826 aa19.23■□□□□ 0.67
KNOP1-202ENST00000564480 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
KNOP1-202ENST00000564480 CD2APQ9Y5K6 639 aa19.23■□□□□ 0.67
KNOP1-202ENST00000564480 NKX1-1Q15270 411 aaPredicted RBP19.22■□□□□ 0.67
KNOP1-202ENST00000564480 KIF20BQ96Q89 1820 aa19.22■□□□□ 0.67
KNOP1-202ENST00000564480 NCAPD2Q15021 1401 aa19.22■□□□□ 0.67
KNOP1-202ENST00000564480 C4BP0C0L5 1744 aa19.21■□□□□ 0.67
KNOP1-202ENST00000564480 FLAD1Q8NFF5 587 aa19.21■□□□□ 0.67
KNOP1-202ENST00000564480 NSD3Q9BZ95 1437 aa19.21■□□□□ 0.67
KNOP1-202ENST00000564480 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
KNOP1-202ENST00000564480 ITGB4P16144 1822 aa19.21■□□□□ 0.67
KNOP1-202ENST00000564480 ATP10DQ9P241 1426 aa19.2■□□□□ 0.66
KNOP1-202ENST00000564480 PPM1GO15355 546 aaPredicted RBP19.2■□□□□ 0.66
KNOP1-202ENST00000564480 PHF14O94880 888 aa19.2■□□□□ 0.66
KNOP1-202ENST00000564480 LINC00116Q8NCU8 138 aa19.2■□□□□ 0.66
KNOP1-202ENST00000564480 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
KNOP1-202ENST00000564480 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
KNOP1-202ENST00000564480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.19■□□□□ 0.66
KNOP1-202ENST00000564480 AK7Q96M32 723 aa19.19■□□□□ 0.66
KNOP1-202ENST00000564480 EYA1Q99502 592 aa19.19■□□□□ 0.66
KNOP1-202ENST00000564480 ITPK1Q13572 414 aa19.18■□□□□ 0.66
KNOP1-202ENST00000564480 ASAP1Q9ULH1 1129 aa19.18■□□□□ 0.66
KNOP1-202ENST00000564480 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
KNOP1-202ENST00000564480 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
KNOP1-202ENST00000564480 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
KNOP1-202ENST00000564480 SIK1P57059 783 aa19.17■□□□□ 0.66
KNOP1-202ENST00000564480 ADCY9O60503 1353 aa19.17■□□□□ 0.66
KNOP1-202ENST00000564480 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
KNOP1-202ENST00000564480 CDCA8Q53HL2 280 aa19.16■□□□□ 0.66
KNOP1-202ENST00000564480 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
KNOP1-202ENST00000564480 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
KNOP1-202ENST00000564480 IGSF1Q8N6C5 1336 aa19.15■□□□□ 0.66
KNOP1-202ENST00000564480 PHKG2P15735 406 aa19.14■□□□□ 0.65
KNOP1-202ENST00000564480 ZNF526Q8TF50 670 aaPredicted RBP19.14■□□□□ 0.65
KNOP1-202ENST00000564480 CEP350Q5VT06 3117 aa19.14■□□□□ 0.65
KNOP1-202ENST00000564480 SSFA2P28290 1259 aa19.13■□□□□ 0.65
KNOP1-202ENST00000564480 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
KNOP1-202ENST00000564480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.651e-6■■■□□ 18.6
KNOP1-202ENST00000564480 TMOD3Q9NYL9 352 aa19.13■□□□□ 0.65
KNOP1-202ENST00000564480 ANKRD26Q9UPS8 1709 aa19.13■□□□□ 0.65
KNOP1-202ENST00000564480 GNPATO15228 680 aa19.12■□□□□ 0.65
KNOP1-202ENST00000564480 HMGB2P26583 209 aaKnown RBP19.12■□□□□ 0.65
KNOP1-202ENST00000564480 SLC4A9Q96Q91 983 aa19.12■□□□□ 0.65
KNOP1-202ENST00000564480 GPBP1L1Q9HC44 474 aaPredicted RBP19.12■□□□□ 0.65
KNOP1-202ENST00000564480 ATP6V1AP38606 617 aa19.11■□□□□ 0.65
KNOP1-202ENST00000564480 EIF4A2Q14240 407 aaKnown RBP19.11■□□□□ 0.65
KNOP1-202ENST00000564480 IFNL2Q8IZJ0 200 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms