RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 TCP11L2Q8N4U5 519 aa24.82■■□□□ 1.56
SPNS1-206ENST00000564476 SPATA31A1Q5TZJ5 1347 aa24.82■■□□□ 1.56
SPNS1-206ENST00000564476 TATP17735 454 aaPredicted RBP24.81■■□□□ 1.56
SPNS1-206ENST00000564476 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
SPNS1-206ENST00000564476 PLEKHO1Q53GL0 409 aaPredicted RBP24.8■■□□□ 1.56
SPNS1-206ENST00000564476 IL2RBP14784 551 aa24.79■■□□□ 1.56
SPNS1-206ENST00000564476 BARGINQ6ZT62 677 aa24.79■■□□□ 1.56
SPNS1-206ENST00000564476 GLI3P10071 1580 aa24.79■■□□□ 1.56
SPNS1-206ENST00000564476 APAF1O14727 1248 aa24.78■■□□□ 1.56
SPNS1-206ENST00000564476 GAS2L2Q8NHY3 880 aa24.78■■□□□ 1.56
SPNS1-206ENST00000564476 PHACTR3Q96KR7 559 aa24.78■■□□□ 1.56
SPNS1-206ENST00000564476 CCDC9Q9Y3X0 531 aaKnown RBP24.78■■□□□ 1.56
SPNS1-206ENST00000564476 NFE2L2Q16236 605 aa24.76■■□□□ 1.55
SPNS1-206ENST00000564476 SPG7Q9UQ90 795 aa24.76■■□□□ 1.55
SPNS1-206ENST00000564476 TMPOP42166 694 aaKnown RBP24.75■■□□□ 1.55
SPNS1-206ENST00000564476 USP35Q9P2H5 1018 aa24.75■■□□□ 1.55
SPNS1-206ENST00000564476 HNRNPUQ00839 825 aaKnown RBP eCLIP24.74■■□□□ 1.55
SPNS1-206ENST00000564476 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
SPNS1-206ENST00000564476 GJD4Q96KN9 370 aaPredicted RBP24.74■■□□□ 1.55
SPNS1-206ENST00000564476 MTHFSDQ2M296 383 aaKnown RBP24.73■■□□□ 1.55
SPNS1-206ENST00000564476 HTATSF1O43719 755 aaKnown RBP24.72■■□□□ 1.55
SPNS1-206ENST00000564476 LMOD3Q0VAK6 560 aa24.72■■□□□ 1.55
SPNS1-206ENST00000564476 DLG5Q8TDM6 1919 aa24.72■■□□□ 1.55
SPNS1-206ENST00000564476 PARP4Q9UKK3 1724 aaKnown RBP24.72■■□□□ 1.55
SPNS1-206ENST00000564476 OVOS2A0A0G2JMS6 1433 aa24.71■■□□□ 1.55
SPNS1-206ENST00000564476 WNK3Q9BYP7 1800 aa24.71■■□□□ 1.55
SPNS1-206ENST00000564476 RIPK4P57078 832 aa24.71■■□□□ 1.55
SPNS1-206ENST00000564476 ZCRB1Q8TBF4 217 aaKnown RBP24.71■■□□□ 1.55
SPNS1-206ENST00000564476 DISP2A7MBM2 1401 aa24.7■■□□□ 1.55
SPNS1-206ENST00000564476 EXOC5O00471 708 aa24.69■■□□□ 1.54
SPNS1-206ENST00000564476 ONECUT3O60422 494 aaPredicted RBP24.69■■□□□ 1.54
SPNS1-206ENST00000564476 AKAP4Q5JQC9 854 aa24.69■■□□□ 1.54
SPNS1-206ENST00000564476 BRWD3Q6RI45 1802 aa24.69■■□□□ 1.54
SPNS1-206ENST00000564476 MEGF6O75095 1541 aa24.69■■□□□ 1.54
SPNS1-206ENST00000564476 PKD1L3Q7Z443 1732 aa24.68■■□□□ 1.54
SPNS1-206ENST00000564476 GNAT3A8MTJ3 354 aa24.67■■□□□ 1.54
SPNS1-206ENST00000564476 C1orf141Q5JVX7 400 aa24.67■■□□□ 1.54
SPNS1-206ENST00000564476 IFNL2Q8IZJ0 200 aa24.67■■□□□ 1.54
SPNS1-206ENST00000564476 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
SPNS1-206ENST00000564476 ZBED9Q6R2W3 1325 aa24.66■■□□□ 1.54
SPNS1-206ENST00000564476 HSP90AB1P08238 724 aaKnown RBP24.66■■□□□ 1.54
SPNS1-206ENST00000564476 NEUROD2Q15784 382 aa24.66■■□□□ 1.54
SPNS1-206ENST00000564476 ZNF530Q6P9A1 599 aaPredicted RBP24.66■■□□□ 1.54
SPNS1-206ENST00000564476 RTF1Q92541 710 aaKnown RBP24.66■■□□□ 1.54
SPNS1-206ENST00000564476 PCDH11XQ9BZA7 1347 aa24.65■■□□□ 1.54
SPNS1-206ENST00000564476 PCDH11YQ9BZA8 1340 aa24.65■■□□□ 1.54
SPNS1-206ENST00000564476 RRP7AQ9Y3A4 280 aaKnown RBP24.65■■□□□ 1.54
SPNS1-206ENST00000564476 DDB1Q16531 1140 aa24.64■■□□□ 1.54
SPNS1-206ENST00000564476 FAM98CQ17RN3 349 aaKnown RBP24.64■■□□□ 1.54
SPNS1-206ENST00000564476 WDR63Q8IWG1 891 aa24.64■■□□□ 1.54
SPNS1-206ENST00000564476 WWC1Q8IX03 1113 aa24.64■■□□□ 1.54
SPNS1-206ENST00000564476 CALD1Q05682 793 aaKnown RBP24.63■■□□□ 1.53
SPNS1-206ENST00000564476 TRIM35Q9UPQ4 493 aa24.63■■□□□ 1.53
SPNS1-206ENST00000564476 MAP3K5Q99683 1374 aa24.63■■□□□ 1.53
SPNS1-206ENST00000564476 PHKG2P15735 406 aa24.62■■□□□ 1.53
SPNS1-206ENST00000564476 PDE3BQ13370 1112 aa24.62■■□□□ 1.53
SPNS1-206ENST00000564476 NKX1-1Q15270 411 aaPredicted RBP24.61■■□□□ 1.53
SPNS1-206ENST00000564476 SALL2Q9Y467 1007 aaPredicted RBP24.61■■□□□ 1.53
SPNS1-206ENST00000564476 EP400Q96L91 3159 aa24.61■■□□□ 1.53
SPNS1-206ENST00000564476 ZNF521Q96K83 1311 aa24.61■■□□□ 1.53
SPNS1-206ENST00000564476 CYP27B1O15528 508 aa24.6■■□□□ 1.53
SPNS1-206ENST00000564476 SHANK3Q9BYB0 1731 aa24.6■■□□□ 1.53
SPNS1-206ENST00000564476 SENP3-EIF4A1A0A087X0R7 540 aa24.59■■□□□ 1.53
SPNS1-206ENST00000564476 DCAF5Q96JK2 942 aa24.59■■□□□ 1.53
SPNS1-206ENST00000564476 TNS2Q63HR2 1409 aa24.59■■□□□ 1.53
SPNS1-206ENST00000564476 VIRMAQ69YN4 1812 aaKnown RBP24.58■■□□□ 1.53
SPNS1-206ENST00000564476 IL16Q14005 1332 aa24.58■■□□□ 1.52
SPNS1-206ENST00000564476 DDX54Q8TDD1 881 aaKnown RBP24.57■■□□□ 1.52
SPNS1-206ENST00000564476 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
SPNS1-206ENST00000564476 IL17REQ8NFR9 667 aa24.56■■□□□ 1.52
SPNS1-206ENST00000564476 SEPT12Q8IYM1 358 aa24.55■■□□□ 1.52
SPNS1-206ENST00000564476 THSD7AQ9UPZ6 1657 aa24.55■■□□□ 1.52
SPNS1-206ENST00000564476 ADAMTS7Q9UKP4 1686 aa24.54■■□□□ 1.52
SPNS1-206ENST00000564476 A0A0G2JS52 829 aa24.54■■□□□ 1.52
SPNS1-206ENST00000564476 RNMTO43148 476 aaKnown RBP24.54■■□□□ 1.52
SPNS1-206ENST00000564476 MYT1Q01538 1121 aa24.54■■□□□ 1.52
SPNS1-206ENST00000564476 CEMIPQ8WUJ3 1361 aa24.54■■□□□ 1.52
SPNS1-206ENST00000564476 SCN11AQ9UI33 1791 aa24.53■■□□□ 1.52
SPNS1-206ENST00000564476 MPRIPQ6WCQ1 1025 aa24.53■■□□□ 1.52
SPNS1-206ENST00000564476 MCM10Q7L590 875 aa24.53■■□□□ 1.52
SPNS1-206ENST00000564476 BABAM1Q9NWV8 329 aa24.53■■□□□ 1.52
SPNS1-206ENST00000564476 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
SPNS1-206ENST00000564476 ERVV-2B6SEH9 535 aa24.52■■□□□ 1.52
SPNS1-206ENST00000564476 E9PSI1 815 aa24.51■■□□□ 1.51
SPNS1-206ENST00000564476 LGR6Q9HBX8 967 aa24.51■■□□□ 1.51
SPNS1-206ENST00000564476 GNAI1P63096 354 aa24.5■■□□□ 1.51
SPNS1-206ENST00000564476 TEFQ10587 303 aa24.5■■□□□ 1.51
SPNS1-206ENST00000564476 DCTN1Q14203 1278 aa24.5■■□□□ 1.51
SPNS1-206ENST00000564476 TAF7Q15545 349 aaPredicted RBP24.5■■□□□ 1.51
SPNS1-206ENST00000564476 MARCH10Q8NA82 808 aaPredicted RBP24.5■■□□□ 1.51
SPNS1-206ENST00000564476 CFAP44Q96MT7 982 aa24.5■■□□□ 1.51
SPNS1-206ENST00000564476 IFT57Q9NWB7 429 aa24.5■■□□□ 1.51
SPNS1-206ENST00000564476 MYH16Q9H6N6 1097 aa24.49■■□□□ 1.51
SPNS1-206ENST00000564476 SLFN5Q08AF3 891 aa24.48■■□□□ 1.51
SPNS1-206ENST00000564476 ZNF853P0CG23 659 aa24.47■■□□□ 1.51
SPNS1-206ENST00000564476 THUMPD2Q9BTF0 503 aaKnown RBP24.47■■□□□ 1.51
SPNS1-206ENST00000564476 BCL9O00512 1426 aa24.46■■□□□ 1.51
SPNS1-206ENST00000564476 CCDC125Q86Z20 511 aa24.46■■□□□ 1.51
SPNS1-206ENST00000564476 TRMT2AQ8IZ69 625 aaKnown RBP24.46■■□□□ 1.51
SPNS1-206ENST00000564476 SLC52A2Q9HAB3 445 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms