RNA–Protein interactions for RNA: ENST00000564257.1

NEIL1-203, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-203ENST00000564257 MAP2P11137 1827 aaKnown RBP29.84■■■□□ 2.37
NEIL1-203ENST00000564257 PROM2Q8N271 834 aa29.83■■■□□ 2.37
NEIL1-203ENST00000564257 ZCRB1Q8TBF4 217 aaKnown RBP29.82■■■□□ 2.36
NEIL1-203ENST00000564257 RAPGEF4Q8WZA2 1011 aa29.82■■■□□ 2.36
NEIL1-203ENST00000564257 DOT1LQ8TEK3 1739 aa29.82■■■□□ 2.36
NEIL1-203ENST00000564257 ANO8Q9HCE9 1232 aaPredicted RBP29.81■■■□□ 2.36
NEIL1-203ENST00000564257 PANK3Q9H999 370 aa29.78■■■□□ 2.36
NEIL1-203ENST00000564257 TATP17735 454 aaPredicted RBP29.77■■■□□ 2.36
NEIL1-203ENST00000564257 SYTL4Q96C24 671 aaPredicted RBP29.77■■■□□ 2.36
NEIL1-203ENST00000564257 STK32BQ9NY57 414 aa29.76■■■□□ 2.35
NEIL1-203ENST00000564257 TNNT2P45379 298 aaPredicted RBP29.75■■■□□ 2.35
NEIL1-203ENST00000564257 CASZ1Q86V15 1759 aa29.74■■■□□ 2.35
NEIL1-203ENST00000564257 SPON1Q9HCB6 807 aa29.72■■■□□ 2.35
NEIL1-203ENST00000564257 WASHC2AQ641Q2 1341 aa29.71■■■□□ 2.35
NEIL1-203ENST00000564257 PRIM1P49642 420 aaKnown RBP29.71■■■□□ 2.35
NEIL1-203ENST00000564257 POLKQ9UBT6 870 aa29.71■■■□□ 2.35
NEIL1-203ENST00000564257 SLC15A2Q16348 729 aa29.7■■■□□ 2.35
NEIL1-203ENST00000564257 PCDH11XQ9BZA7 1347 aa29.7■■■□□ 2.34
NEIL1-203ENST00000564257 PCDH11YQ9BZA8 1340 aa29.7■■■□□ 2.34
NEIL1-203ENST00000564257 NSD2O96028 1365 aa29.69■■■□□ 2.34
NEIL1-203ENST00000564257 PAPPAQ13219 1627 aa29.69■■■□□ 2.34
NEIL1-203ENST00000564257 PPP1R1BQ9UD71 204 aaPredicted RBP29.68■■■□□ 2.34
NEIL1-203ENST00000564257 PKD1L3Q7Z443 1732 aa29.67■■■□□ 2.34
NEIL1-203ENST00000564257 PDGFDQ9GZP0 370 aaPredicted RBP29.65■■■□□ 2.34
NEIL1-203ENST00000564257 NCAPD2Q15021 1401 aa29.64■■■□□ 2.34
NEIL1-203ENST00000564257 KNSTRNQ9Y448 316 aa29.64■■■□□ 2.34
NEIL1-203ENST00000564257 KIF7Q2M1P5 1343 aa29.64■■■□□ 2.34
NEIL1-203ENST00000564257 LY75O60449 1722 aa29.63■■■□□ 2.33
NEIL1-203ENST00000564257 ZBTB7AO95365 584 aa29.62■■■□□ 2.33
NEIL1-203ENST00000564257 SLC27A3Q5K4L6 730 aa29.62■■■□□ 2.33
NEIL1-203ENST00000564257 MORC1Q86VD1 984 aa29.62■■■□□ 2.33
NEIL1-203ENST00000564257 EYA1Q99502 592 aa29.62■■■□□ 2.33
NEIL1-203ENST00000564257 LRRC4BQ9NT99 713 aa29.62■■■□□ 2.33
NEIL1-203ENST00000564257 EIF4A2Q14240 407 aaKnown RBP29.6■■■□□ 2.33
NEIL1-203ENST00000564257 SPG7Q9UQ90 795 aa29.59■■■□□ 2.33
NEIL1-203ENST00000564257 CYP27B1O15528 508 aa29.58■■■□□ 2.33
NEIL1-203ENST00000564257 TOGARAM1Q9Y4F4 1720 aa29.57■■■□□ 2.32
NEIL1-203ENST00000564257 ZNF827Q17R98 1081 aa29.57■■■□□ 2.32
NEIL1-203ENST00000564257 ATF5Q9Y2D1 282 aaPredicted RBP29.56■■■□□ 2.32
NEIL1-203ENST00000564257 ITGB4P16144 1822 aa29.56■■■□□ 2.32
NEIL1-203ENST00000564257 KCNQ4P56696 695 aa29.55■■■□□ 2.32
NEIL1-203ENST00000564257 CCNL1Q9UK58 526 aaPredicted RBP29.54■■■□□ 2.32
NEIL1-203ENST00000564257 QSER1Q2KHR3 1735 aa29.54■■■□□ 2.32
NEIL1-203ENST00000564257 MPRIPQ6WCQ1 1025 aa29.53■■■□□ 2.32
NEIL1-203ENST00000564257 MTFR1LQ9H019 292 aa29.53■■■□□ 2.32
NEIL1-203ENST00000564257 TUBGCP6Q96RT7 1819 aa29.51■■■□□ 2.31
NEIL1-203ENST00000564257 AKT1S1Q96B36 256 aa29.51■■■□□ 2.31
NEIL1-203ENST00000564257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.51■■■□□ 2.31
NEIL1-203ENST00000564257 IGSF1Q8N6C5 1336 aa29.5■■■□□ 2.31
NEIL1-203ENST00000564257 AMER1Q5JTC6 1135 aaPredicted RBP29.49■■■□□ 2.31
NEIL1-203ENST00000564257 TFCP2L1Q9NZI6 479 aa29.49■■■□□ 2.31
NEIL1-203ENST00000564257 C5P01031 1676 aa29.48■■■□□ 2.31
NEIL1-203ENST00000564257 PTGER2P43116 358 aa29.48■■■□□ 2.31
NEIL1-203ENST00000564257 NKX1-1Q15270 411 aaPredicted RBP29.47■■■□□ 2.31
NEIL1-203ENST00000564257 IFNL2Q8IZJ0 200 aa29.47■■■□□ 2.31
NEIL1-203ENST00000564257 PALLDQ8WX93 1383 aa29.47■■■□□ 2.31
NEIL1-203ENST00000564257 PLEKHG2Q9H7P9 1386 aa29.45■■■□□ 2.31
NEIL1-203ENST00000564257 PHKG2P15735 406 aa29.45■■■□□ 2.31
NEIL1-203ENST00000564257 PNPLA7Q6ZV29 1317 aa29.44■■■□□ 2.3
NEIL1-203ENST00000564257 TAF1LQ8IZX4 1826 aa29.43■■■□□ 2.3
NEIL1-203ENST00000564257 SMARCC1Q92922 1105 aaPredicted RBP29.43■■■□□ 2.3
NEIL1-203ENST00000564257 TMOD3Q9NYL9 352 aa29.42■■■□□ 2.3
NEIL1-203ENST00000564257 DCAF8L1A6NGE4 600 aa29.41■■■□□ 2.3
NEIL1-203ENST00000564257 CC2D1BQ5T0F9 858 aaKnown RBP29.41■■■□□ 2.3
NEIL1-203ENST00000564257 PIGBQ92521 554 aa29.41■■■□□ 2.3
NEIL1-203ENST00000564257 SLC16A10Q8TF71 515 aa29.4■■■□□ 2.3
NEIL1-203ENST00000564257 PER1O15534 1290 aaPredicted RBP29.39■■■□□ 2.3
NEIL1-203ENST00000564257 HMGB2P26583 209 aaKnown RBP29.39■■■□□ 2.3
NEIL1-203ENST00000564257 PLEKHO1Q53GL0 409 aaPredicted RBP29.39■■■□□ 2.3
NEIL1-203ENST00000564257 SGIP1Q9BQI5 828 aa29.39■■■□□ 2.3
NEIL1-203ENST00000564257 MSH5O43196 834 aa29.38■■■□□ 2.29
NEIL1-203ENST00000564257 AEBP1Q8IUX7 1158 aa29.38■■■□□ 2.29
NEIL1-203ENST00000564257 ARXQ96QS3 562 aa29.37■■■□□ 2.29
NEIL1-203ENST00000564257 MTHFSP49914 203 aa29.36■■■□□ 2.29
NEIL1-203ENST00000564257 CNGB1Q14028 1251 aaPredicted RBP29.36■■■□□ 2.29
NEIL1-203ENST00000564257 SULT6B1Q6IMI4 303 aa29.36■■■□□ 2.29
NEIL1-203ENST00000564257 FHDC1Q9C0D6 1143 aaPredicted RBP29.36■■■□□ 2.29
NEIL1-203ENST00000564257 C4BP0C0L5 1744 aa29.36■■■□□ 2.29
NEIL1-203ENST00000564257 HSP90AB1P08238 724 aaKnown RBP29.35■■■□□ 2.29
NEIL1-203ENST00000564257 IL13P35225 146 aa29.35■■■□□ 2.29
NEIL1-203ENST00000564257 AMOTQ4VCS5 1084 aa29.35■■■□□ 2.29
NEIL1-203ENST00000564257 ZNF530Q6P9A1 599 aaPredicted RBP29.35■■■□□ 2.29
NEIL1-203ENST00000564257 POLD1P28340 1107 aa29.34■■■□□ 2.29
NEIL1-203ENST00000564257 COL24A1Q17RW2 1714 aa29.33■■■□□ 2.29
NEIL1-203ENST00000564257 DCAF5Q96JK2 942 aa29.32■■■□□ 2.28
NEIL1-203ENST00000564257 KDRP35968 1356 aa29.31■■■□□ 2.28
NEIL1-203ENST00000564257 C1orf141Q5JVX7 400 aa29.31■■■□□ 2.28
NEIL1-203ENST00000564257 AK7Q96M32 723 aa29.31■■■□□ 2.28
NEIL1-203ENST00000564257 SYT17Q9BSW7 474 aa29.31■■■□□ 2.28
NEIL1-203ENST00000564257 ASAP1Q9ULH1 1129 aa29.31■■■□□ 2.28
NEIL1-203ENST00000564257 LOC102724428A0A0B4J2F2 783 aa29.3■■■□□ 2.28
NEIL1-203ENST00000564257 SIK1P57059 783 aa29.3■■■□□ 2.28
NEIL1-203ENST00000564257 COL23A1Q86Y22 540 aaPredicted RBP29.3■■■□□ 2.28
NEIL1-203ENST00000564257 NPC1L1Q9UHC9 1359 aa29.29■■■□□ 2.28
NEIL1-203ENST00000564257 ERVV-2B6SEH9 535 aa29.29■■■□□ 2.28
NEIL1-203ENST00000564257 KLHL34Q8N239 644 aa29.28■■■□□ 2.28
NEIL1-203ENST00000564257 KDM6AO15550 1401 aaPredicted RBP29.28■■■□□ 2.28
NEIL1-203ENST00000564257 FLAD1Q8NFF5 587 aa29.27■■■□□ 2.28
NEIL1-203ENST00000564257 ATG3Q9NT62 314 aa29.27■■■□□ 2.28
NEIL1-203ENST00000564257 UBR3Q6ZT12 1888 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms