RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
UBFD1-203ENST00000564106 NSD2O96028 1365 aa13.12□□□□□ -0.31
UBFD1-203ENST00000564106 EXOC5O00471 708 aa13.12□□□□□ -0.31
UBFD1-203ENST00000564106 PLSCR1O15162 318 aa13.12□□□□□ -0.31
UBFD1-203ENST00000564106 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
UBFD1-203ENST00000564106 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
UBFD1-203ENST00000564106 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
UBFD1-203ENST00000564106 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
UBFD1-203ENST00000564106 IL2RBP14784 551 aa13.11□□□□□ -0.31
UBFD1-203ENST00000564106 COG3Q96JB2 828 aa13.11□□□□□ -0.31
UBFD1-203ENST00000564106 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
UBFD1-203ENST00000564106 KAT6BQ8WYB5 2073 aa13.1□□□□□ -0.31
UBFD1-203ENST00000564106 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
UBFD1-203ENST00000564106 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
UBFD1-203ENST00000564106 NBPF6Q5VWK0 638 aa13.09□□□□□ -0.31
UBFD1-203ENST00000564106 NBPF4Q96M43 638 aa13.09□□□□□ -0.31
UBFD1-203ENST00000564106 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
UBFD1-203ENST00000564106 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
UBFD1-203ENST00000564106 LRRC4BQ9NT99 713 aa13.08□□□□□ -0.32
UBFD1-203ENST00000564106 EMILIN1Q9Y6C2 1016 aa13.08□□□□□ -0.32
UBFD1-203ENST00000564106 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.32
UBFD1-203ENST00000564106 KCNQ4P56696 695 aa13.07□□□□□ -0.32
UBFD1-203ENST00000564106 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
UBFD1-203ENST00000564106 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
UBFD1-203ENST00000564106 LY75O60449 1722 aa13.07□□□□□ -0.32
UBFD1-203ENST00000564106 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
UBFD1-203ENST00000564106 AMPHP49418 695 aa13.06□□□□□ -0.32
UBFD1-203ENST00000564106 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
UBFD1-203ENST00000564106 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
UBFD1-203ENST00000564106 MAP2P11137 1827 aaKnown RBP13.06□□□□□ -0.32
UBFD1-203ENST00000564106 INSRP06213 1382 aa13.06□□□□□ -0.32
UBFD1-203ENST00000564106 ZBTB7AO95365 584 aa13.05□□□□□ -0.32
UBFD1-203ENST00000564106 PTGER2P43116 358 aa13.04□□□□□ -0.32
UBFD1-203ENST00000564106 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
UBFD1-203ENST00000564106 PKD1L3Q7Z443 1732 aa13.04□□□□□ -0.32
UBFD1-203ENST00000564106 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
UBFD1-203ENST00000564106 NCAPD2Q15021 1401 aa13.03□□□□□ -0.32
UBFD1-203ENST00000564106 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
UBFD1-203ENST00000564106 FAM9BQ8IZU0 186 aa13.02□□□□□ -0.33
UBFD1-203ENST00000564106 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
UBFD1-203ENST00000564106 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
UBFD1-203ENST00000564106 FLT4P35916 1363 aa13.02□□□□□ -0.33
UBFD1-203ENST00000564106 ITGB4P16144 1822 aa13.02□□□□□ -0.33
UBFD1-203ENST00000564106 CCDC184Q52MB2 194 aa13.01□□□□□ -0.33
UBFD1-203ENST00000564106 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
UBFD1-203ENST00000564106 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
UBFD1-203ENST00000564106 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
UBFD1-203ENST00000564106 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
UBFD1-203ENST00000564106 PPP2R1AP30153 589 aa13□□□□□ -0.33
UBFD1-203ENST00000564106 HNRNPUQ00839 825 aaKnown RBP eCLIP13□□□□□ -0.33
UBFD1-203ENST00000564106 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
UBFD1-203ENST00000564106 AKT1S1Q96B36 256 aa13□□□□□ -0.33
UBFD1-203ENST00000564106 CYP27B1O15528 508 aa12.99□□□□□ -0.33
UBFD1-203ENST00000564106 MORC1Q86VD1 984 aa12.99□□□□□ -0.33
UBFD1-203ENST00000564106 STK32BQ9NY57 414 aa12.99□□□□□ -0.33
UBFD1-203ENST00000564106 UTRNP46939 3433 aa12.98□□□□□ -0.33
UBFD1-203ENST00000564106 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
UBFD1-203ENST00000564106 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
UBFD1-203ENST00000564106 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
UBFD1-203ENST00000564106 ZBED9Q6R2W3 1325 aa12.97□□□□□ -0.33
UBFD1-203ENST00000564106 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
UBFD1-203ENST00000564106 C5P01031 1676 aa12.97□□□□□ -0.33
UBFD1-203ENST00000564106 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
UBFD1-203ENST00000564106 AMIGO3Q86WK7 504 aa12.97□□□□□ -0.33
UBFD1-203ENST00000564106 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
UBFD1-203ENST00000564106 PPM1GO15355 546 aaPredicted RBP12.96□□□□□ -0.33
UBFD1-203ENST00000564106 SMIM5Q71RC9 77 aa12.96□□□□□ -0.33
UBFD1-203ENST00000564106 EYA1Q99502 592 aa12.96□□□□□ -0.33
UBFD1-203ENST00000564106 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
UBFD1-203ENST00000564106 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBFD1-203ENST00000564106 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
UBFD1-203ENST00000564106 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
UBFD1-203ENST00000564106 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
UBFD1-203ENST00000564106 RAPGEF4Q8WZA2 1011 aa12.94□□□□□ -0.34
UBFD1-203ENST00000564106 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
UBFD1-203ENST00000564106 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
UBFD1-203ENST00000564106 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
UBFD1-203ENST00000564106 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
UBFD1-203ENST00000564106 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
UBFD1-203ENST00000564106 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
UBFD1-203ENST00000564106 SYT17Q9BSW7 474 aa12.91□□□□□ -0.34
UBFD1-203ENST00000564106 CCNL1Q9UK58 526 aaPredicted RBP12.91□□□□□ -0.34
UBFD1-203ENST00000564106 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
UBFD1-203ENST00000564106 SLC27A3Q5K4L6 730 aa12.9□□□□□ -0.34
UBFD1-203ENST00000564106 MPRIPQ6WCQ1 1025 aa12.9□□□□□ -0.34
UBFD1-203ENST00000564106 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
UBFD1-203ENST00000564106 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
UBFD1-203ENST00000564106 PIGBQ92521 554 aa12.9□□□□□ -0.34
UBFD1-203ENST00000564106 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
UBFD1-203ENST00000564106 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
UBFD1-203ENST00000564106 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
UBFD1-203ENST00000564106 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
UBFD1-203ENST00000564106 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
UBFD1-203ENST00000564106 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
UBFD1-203ENST00000564106 ARXQ96QS3 562 aa12.88□□□□□ -0.35
UBFD1-203ENST00000564106 PHKG2P15735 406 aa12.87□□□□□ -0.35
UBFD1-203ENST00000564106 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
UBFD1-203ENST00000564106 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
UBFD1-203ENST00000564106 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
UBFD1-203ENST00000564106 MTHFSP49914 203 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms