RNA–Protein interactions for RNA: ENST00000563964.5

LAT-208, Transcript of linker for activation of T cells, human

TSL 5

Gene LAT, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAT-208	ENST00000563964	SHANK3	Q9BYB0	1731 aa		32.34	■■■□□ 2.77
LAT-208	ENST00000563964	PPM1G	O15355	546 aa	Predicted RBP	32.32	■■■□□ 2.76
LAT-208	ENST00000563964	RAPGEF4	Q8WZA2	1011 aa		32.32	■■■□□ 2.76
LAT-208	ENST00000563964	STK32B	Q9NY57	414 aa		32.31	■■■□□ 2.76
LAT-208	ENST00000563964	PANK3	Q9H999	370 aa		32.3	■■■□□ 2.76
LAT-208	ENST00000563964	SPON1	Q9HCB6	807 aa		32.3	■■■□□ 2.76
LAT-208	ENST00000563964	MAP2	P11137	1827 aa	Known RBP	32.29	■■■□□ 2.76
LAT-208	ENST00000563964	ANKRD26	Q9UPS8	1709 aa		32.29	■■■□□ 2.76
LAT-208	ENST00000563964	TAT	P17735	454 aa	Predicted RBP	32.28	■■■□□ 2.76
LAT-208	ENST00000563964	SLC15A2	Q16348	729 aa		32.28	■■■□□ 2.76
LAT-208	ENST00000563964	CASZ1	Q86V15	1759 aa		32.27	■■■□□ 2.76
LAT-208	ENST00000563964	DOT1L	Q8TEK3	1739 aa		32.27	■■■□□ 2.76
LAT-208	ENST00000563964	PRIM1	P49642	420 aa	Known RBP	32.27	■■■□□ 2.76
LAT-208	ENST00000563964	SYTL4	Q96C24	671 aa	Predicted RBP	32.27	■■■□□ 2.76
LAT-208	ENST00000563964	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.27	■■■□□ 2.76
LAT-208	ENST00000563964	POLK	Q9UBT6	870 aa		32.26	■■■□□ 2.75
LAT-208	ENST00000563964	WASHC2A	Q641Q2	1341 aa		32.26	■■■□□ 2.75
LAT-208	ENST00000563964	TNNT2	P45379	298 aa	Predicted RBP	32.24	■■■□□ 2.75
LAT-208	ENST00000563964	LRRC4B	Q9NT99	713 aa		32.22	■■■□□ 2.75
LAT-208	ENST00000563964	PAPPA	Q13219	1627 aa		32.22	■■■□□ 2.75
LAT-208	ENST00000563964	NSD2	O96028	1365 aa		32.2	■■■□□ 2.75
LAT-208	ENST00000563964	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.2	■■■□□ 2.75
LAT-208	ENST00000563964	ZBTB7A	O95365	584 aa		32.19	■■■□□ 2.74
LAT-208	ENST00000563964	PCDH11X	Q9BZA7	1347 aa		32.19	■■■□□ 2.74
LAT-208	ENST00000563964	PCDH11Y	Q9BZA8	1340 aa		32.19	■■■□□ 2.74
LAT-208	ENST00000563964	NCAPD2	Q15021	1401 aa		32.18	■■■□□ 2.74
LAT-208	ENST00000563964	SLC27A3	Q5K4L6	730 aa		32.17	■■■□□ 2.74
LAT-208	ENST00000563964	EYA1	Q99502	592 aa		32.17	■■■□□ 2.74
LAT-208	ENST00000563964	ZNF827	Q17R98	1081 aa		32.15	■■■□□ 2.74
LAT-208	ENST00000563964	CYP27B1	O15528	508 aa		32.14	■■■□□ 2.74
LAT-208	ENST00000563964	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.14	■■■□□ 2.74
LAT-208	ENST00000563964	LY75	O60449	1722 aa		32.12	■■■□□ 2.73
LAT-208	ENST00000563964	PKD1L3	Q7Z443	1732 aa		32.12	■■■□□ 2.73
LAT-208	ENST00000563964	KCNQ4	P56696	695 aa		32.12	■■■□□ 2.73
LAT-208	ENST00000563964	EIF4A2	Q14240	407 aa	Known RBP	32.12	■■■□□ 2.73
LAT-208	ENST00000563964	KIF7	Q2M1P5	1343 aa		32.1	■■■□□ 2.73
LAT-208	ENST00000563964	PTGER2	P43116	358 aa		32.1	■■■□□ 2.73
LAT-208	ENST00000563964	AKT1S1	Q96B36	256 aa		32.1	■■■□□ 2.73
LAT-208	ENST00000563964	KNSTRN	Q9Y448	316 aa		32.1	■■■□□ 2.73
LAT-208	ENST00000563964	MORC1	Q86VD1	984 aa		32.09	■■■□□ 2.73
LAT-208	ENST00000563964	SPG7	Q9UQ90	795 aa		32.09	■■■□□ 2.73
LAT-208	ENST00000563964	MTFR1L	Q9H019	292 aa		32.08	■■■□□ 2.73
LAT-208	ENST00000563964	CCNL1	Q9UK58	526 aa	Predicted RBP	32.06	■■■□□ 2.72
LAT-208	ENST00000563964	MPRIP	Q6WCQ1	1025 aa		32.05	■■■□□ 2.72
LAT-208	ENST00000563964	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.05	■■■□□ 2.72
LAT-208	ENST00000563964	TOGARAM1	Q9Y4F4	1720 aa		32.04	■■■□□ 2.72
LAT-208	ENST00000563964	NKX1-1	Q15270	411 aa	Predicted RBP	32.03	■■■□□ 2.72
LAT-208	ENST00000563964	ITGB4	P16144	1822 aa		32.02	■■■□□ 2.72
LAT-208	ENST00000563964	QSER1	Q2KHR3	1735 aa		32.01	■■■□□ 2.72
LAT-208	ENST00000563964	SGIP1	Q9BQI5	828 aa		32.01	■■■□□ 2.71
LAT-208	ENST00000563964	TFCP2L1	Q9NZI6	479 aa		32.01	■■■□□ 2.71
LAT-208	ENST00000563964	IGSF1	Q8N6C5	1336 aa		32	■■■□□ 2.71
LAT-208	ENST00000563964	AMER1	Q5JTC6	1135 aa	Predicted RBP	32	■■■□□ 2.71
LAT-208	ENST00000563964	PNPLA7	Q6ZV29	1317 aa		31.99	■■■□□ 2.71
LAT-208	ENST00000563964	TUBGCP6	Q96RT7	1819 aa		31.98	■■■□□ 2.71
LAT-208	ENST00000563964	PALLD	Q8WX93	1383 aa		31.97	■■■□□ 2.71
LAT-208	ENST00000563964	IFNL2	Q8IZJ0	200 aa		31.97	■■■□□ 2.71
LAT-208	ENST00000563964	PHKG2	P15735	406 aa		31.96	■■■□□ 2.71
LAT-208	ENST00000563964	PIGB	Q92521	554 aa		31.96	■■■□□ 2.71
LAT-208	ENST00000563964	SLC16A10	Q8TF71	515 aa		31.95	■■■□□ 2.71
LAT-208	ENST00000563964	PLEKHG2	Q9H7P9	1386 aa		31.94	■■■□□ 2.7
LAT-208	ENST00000563964	PER1	O15534	1290 aa	Predicted RBP	31.93	■■■□□ 2.7
LAT-208	ENST00000563964	SMARCC1	Q92922	1105 aa	Predicted RBP	31.93	■■■□□ 2.7
LAT-208	ENST00000563964	FHDC1	Q9C0D6	1143 aa	Predicted RBP	31.93	■■■□□ 2.7
LAT-208	ENST00000563964	C5	P01031	1676 aa		31.92	■■■□□ 2.7
LAT-208	ENST00000563964	ARX	Q96QS3	562 aa		31.91	■■■□□ 2.7
LAT-208	ENST00000563964	DCAF8L1	A6NGE4	600 aa		31.9	■■■□□ 2.7
LAT-208	ENST00000563964	TMOD3	Q9NYL9	352 aa		31.9	■■■□□ 2.7
LAT-208	ENST00000563964	SYT17	Q9BSW7	474 aa		31.89	■■■□□ 2.7
LAT-208	ENST00000563964	TAF1L	Q8IZX4	1826 aa		31.89	■■■□□ 2.69
LAT-208	ENST00000563964	PLEKHO1	Q53GL0	409 aa	Predicted RBP	31.88	■■■□□ 2.69
LAT-208	ENST00000563964	AEBP1	Q8IUX7	1158 aa		31.88	■■■□□ 2.69
LAT-208	ENST00000563964	HMGB2	P26583	209 aa	Known RBP	31.87	■■■□□ 2.69
LAT-208	ENST00000563964	IL13	P35225	146 aa		31.86	■■■□□ 2.69
LAT-208	ENST00000563964	CC2D1B	Q5T0F9	858 aa	Known RBP	31.86	■■■□□ 2.69
LAT-208	ENST00000563964	COL23A1	Q86Y22	540 aa	Predicted RBP	31.86	■■■□□ 2.69
LAT-208	ENST00000563964	MSH5	O43196	834 aa		31.85	■■■□□ 2.69
LAT-208	ENST00000563964	COL24A1	Q17RW2	1714 aa		31.85	■■■□□ 2.69
LAT-208	ENST00000563964	POLD1	P28340	1107 aa		31.84	■■■□□ 2.69
LAT-208	ENST00000563964	MTHFS	P49914	203 aa		31.84	■■■□□ 2.69
LAT-208	ENST00000563964	AMOT	Q4VCS5	1084 aa		31.84	■■■□□ 2.69
LAT-208	ENST00000563964	SULT6B1	Q6IMI4	303 aa		31.84	■■■□□ 2.69
LAT-208	ENST00000563964	ASAP1	Q9ULH1	1129 aa		31.84	■■■□□ 2.69
LAT-208	ENST00000563964	ZNF530	Q6P9A1	599 aa	Predicted RBP	31.83	■■■□□ 2.69
LAT-208	ENST00000563964	C4B	P0C0L5	1744 aa		31.81	■■■□□ 2.68
LAT-208	ENST00000563964	LOC102724428	A0A0B4J2F2	783 aa		31.81	■■■□□ 2.68
LAT-208	ENST00000563964	HSP90AB1	P08238	724 aa	Known RBP	31.81	■■■□□ 2.68
LAT-208	ENST00000563964	SIK1	P57059	783 aa		31.81	■■■□□ 2.68
LAT-208	ENST00000563964	DCAF5	Q96JK2	942 aa		31.81	■■■□□ 2.68
LAT-208	ENST00000563964	ERVV-2	B6SEH9	535 aa		31.8	■■■□□ 2.68
LAT-208	ENST00000563964	KDR	P35968	1356 aa		31.8	■■■□□ 2.68
LAT-208	ENST00000563964	ATG3	Q9NT62	314 aa		31.79	■■■□□ 2.68
LAT-208	ENST00000563964	MAP3K5	Q99683	1374 aa		31.79	■■■□□ 2.68
LAT-208	ENST00000563964	FLAD1	Q8NFF5	587 aa		31.78	■■■□□ 2.68
LAT-208	ENST00000563964	AK7	Q96M32	723 aa		31.78	■■■□□ 2.68
LAT-208	ENST00000563964	KDM6A	O15550	1401 aa	Predicted RBP	31.76	■■■□□ 2.68
LAT-208	ENST00000563964	CNGB1	Q14028	1251 aa	Predicted RBP	31.76	■■■□□ 2.67
LAT-208	ENST00000563964	C1orf141	Q5JVX7	400 aa		31.76	■■■□□ 2.67
LAT-208	ENST00000563964	LINC00116	Q8NCU8	138 aa		31.76	■■■□□ 2.67
LAT-208	ENST00000563964	NPC1L1	Q9UHC9	1359 aa		31.75	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms