RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 DLG5Q8TDM6 1919 aa35.8■■■■□ 3.32
SH3GL3-205ENST00000563901 TATP17735 454 aaPredicted RBP35.79■■■■□ 3.32
SH3GL3-205ENST00000563901 OVOS2A0A0G2JMS6 1433 aa35.79■■■■□ 3.32
SH3GL3-205ENST00000563901 MAPK8IP3Q9UPT6 1336 aa35.78■■■■□ 3.32
SH3GL3-205ENST00000563901 THRAP3Q9Y2W1 955 aaKnown RBP35.78■■■■□ 3.32
SH3GL3-205ENST00000563901 LRRC37A3O60309 1634 aa35.77■■■■□ 3.32
SH3GL3-205ENST00000563901 PNNQ9H307 717 aaKnown RBP35.76■■■■□ 3.32
SH3GL3-205ENST00000563901 THSD7AQ9UPZ6 1657 aa35.75■■■■□ 3.31
SH3GL3-205ENST00000563901 APAF1O14727 1248 aa35.75■■■■□ 3.31
SH3GL3-205ENST00000563901 BARGINQ6ZT62 677 aa35.75■■■■□ 3.31
SH3GL3-205ENST00000563901 RRP7AQ9Y3A4 280 aaKnown RBP35.75■■■■□ 3.31
SH3GL3-205ENST00000563901 MTHFSDQ2M296 383 aaKnown RBP35.74■■■■□ 3.31
SH3GL3-205ENST00000563901 NEFMP07197 916 aa35.72■■■■□ 3.31
SH3GL3-205ENST00000563901 POTEAQ6S8J7 498 aa35.72■■■■□ 3.31
SH3GL3-205ENST00000563901 NEUROD2Q15784 382 aa35.7■■■■□ 3.31
SH3GL3-205ENST00000563901 PLEKHO1Q53GL0 409 aaPredicted RBP35.69■■■■□ 3.3
SH3GL3-205ENST00000563901 A0A0G2JS52 829 aa35.68■■■■□ 3.3
SH3GL3-205ENST00000563901 MYT1Q01538 1121 aa35.68■■■■□ 3.3
SH3GL3-205ENST00000563901 SALL2Q9Y467 1007 aaPredicted RBP35.68■■■■□ 3.3
SH3GL3-205ENST00000563901 YTHDC1Q96MU7 727 aaKnown RBP35.68■■■■□ 3.3
SH3GL3-205ENST00000563901 VIRMAQ69YN4 1812 aaKnown RBP35.67■■■■□ 3.3
SH3GL3-205ENST00000563901 TMPOP42166 694 aaKnown RBP35.67■■■■□ 3.3
SH3GL3-205ENST00000563901 ZCRB1Q8TBF4 217 aaKnown RBP35.67■■■■□ 3.3
SH3GL3-205ENST00000563901 NFE2L2Q16236 605 aa35.66■■■■□ 3.3
SH3GL3-205ENST00000563901 ZNF530Q6P9A1 599 aaPredicted RBP35.66■■■■□ 3.3
SH3GL3-205ENST00000563901 TNS2Q63HR2 1409 aa35.66■■■■□ 3.3
SH3GL3-205ENST00000563901 RBM6P78332 1123 aaKnown RBP35.65■■■■□ 3.3
SH3GL3-205ENST00000563901 AMOTQ4VCS5 1084 aa35.65■■■■□ 3.3
SH3GL3-205ENST00000563901 CDCA7Q9BWT1 371 aaPredicted RBP35.65■■■■□ 3.3
SH3GL3-205ENST00000563901 SPG7Q9UQ90 795 aa35.65■■■■□ 3.3
SH3GL3-205ENST00000563901 BRWD3Q6RI45 1802 aa35.65■■■■□ 3.3
SH3GL3-205ENST00000563901 HNRNPUQ00839 825 aaKnown RBP eCLIP35.64■■■■□ 3.3
SH3GL3-205ENST00000563901 GAS2L2Q8NHY3 880 aa35.63■■■■□ 3.29
SH3GL3-205ENST00000563901 DDB1Q16531 1140 aa35.62■■■■□ 3.29
SH3GL3-205ENST00000563901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.62■■■■□ 3.29
SH3GL3-205ENST00000563901 PLEKHG2Q9H7P9 1386 aa35.62■■■■□ 3.29
SH3GL3-205ENST00000563901 CYP27B1O15528 508 aa35.61■■■■□ 3.29
SH3GL3-205ENST00000563901 RIPK4P57078 832 aa35.61■■■■□ 3.29
SH3GL3-205ENST00000563901 DDX54Q8TDD1 881 aaKnown RBP35.61■■■■□ 3.29
SH3GL3-205ENST00000563901 EXOC5O00471 708 aa35.61■■■■□ 3.29
SH3GL3-205ENST00000563901 ONECUT3O60422 494 aaPredicted RBP35.61■■■■□ 3.29
SH3GL3-205ENST00000563901 RXRBP28702 533 aa35.6■■■■□ 3.29
SH3GL3-205ENST00000563901 SEPT12Q8IYM1 358 aa35.6■■■■□ 3.29
SH3GL3-205ENST00000563901 PCDH11XQ9BZA7 1347 aa35.59■■■■□ 3.29
SH3GL3-205ENST00000563901 PCDH11YQ9BZA8 1340 aa35.59■■■■□ 3.29
SH3GL3-205ENST00000563901 PHKG2P15735 406 aa35.57■■■■□ 3.29
SH3GL3-205ENST00000563901 MAP3K5Q99683 1374 aa35.57■■■■□ 3.28
SH3GL3-205ENST00000563901 C1orf141Q5JVX7 400 aa35.56■■■■□ 3.28
SH3GL3-205ENST00000563901 TRIM35Q9UPQ4 493 aa35.56■■■■□ 3.28
SH3GL3-205ENST00000563901 DCTN1Q14203 1278 aa35.55■■■■□ 3.28
SH3GL3-205ENST00000563901 AKAP4Q5JQC9 854 aa35.54■■■■□ 3.28
SH3GL3-205ENST00000563901 IFNL2Q8IZJ0 200 aa35.54■■■■□ 3.28
SH3GL3-205ENST00000563901 SCN11AQ9UI33 1791 aa35.54■■■■□ 3.28
SH3GL3-205ENST00000563901 RGS12O14924 1447 aa35.54■■■■□ 3.28
SH3GL3-205ENST00000563901 GNAT3A8MTJ3 354 aa35.54■■■■□ 3.28
SH3GL3-205ENST00000563901 TOGARAM1Q9Y4F4 1720 aa35.53■■■■□ 3.28
SH3GL3-205ENST00000563901 MPRIPQ6WCQ1 1025 aa35.53■■■■□ 3.28
SH3GL3-205ENST00000563901 MARCH10Q8NA82 808 aaPredicted RBP35.53■■■■□ 3.28
SH3GL3-205ENST00000563901 THUMPD2Q9BTF0 503 aaKnown RBP35.53■■■■□ 3.28
SH3GL3-205ENST00000563901 MCM10Q7L590 875 aa35.52■■■■□ 3.28
SH3GL3-205ENST00000563901 KDM6AO15550 1401 aaPredicted RBP35.51■■■■□ 3.27
SH3GL3-205ENST00000563901 ADAMTS7Q9UKP4 1686 aa35.51■■■■□ 3.27
SH3GL3-205ENST00000563901 LGR6Q9HBX8 967 aa35.5■■■■□ 3.27
SH3GL3-205ENST00000563901 FAM182BQ5T319 152 aa35.49■■■■□ 3.27
SH3GL3-205ENST00000563901 PDE3BQ13370 1112 aa35.48■■■■□ 3.27
SH3GL3-205ENST00000563901 DOT1LQ8TEK3 1739 aa35.48■■■■□ 3.27
SH3GL3-205ENST00000563901 IL17REQ8NFR9 667 aa35.47■■■■□ 3.27
SH3GL3-205ENST00000563901 WWC1Q8IX03 1113 aa35.46■■■■□ 3.27
SH3GL3-205ENST00000563901 RTF1Q92541 710 aaKnown RBP35.46■■■■□ 3.27
SH3GL3-205ENST00000563901 KAT6BQ8WYB5 2073 aa35.44■■■■□ 3.26
SH3GL3-205ENST00000563901 RNMTO43148 476 aaKnown RBP35.43■■■■□ 3.26
SH3GL3-205ENST00000563901 LMOD3Q0VAK6 560 aa35.43■■■■□ 3.26
SH3GL3-205ENST00000563901 CCDC27Q2M243 656 aa35.43■■■■□ 3.26
SH3GL3-205ENST00000563901 ITGB4P16144 1822 aa35.43■■■■□ 3.26
SH3GL3-205ENST00000563901 NKX1-1Q15270 411 aaPredicted RBP35.43■■■■□ 3.26
SH3GL3-205ENST00000563901 ZNF521Q96K83 1311 aa35.42■■■■□ 3.26
SH3GL3-205ENST00000563901 SIPA1L3O60292 1781 aaPredicted RBP35.42■■■■□ 3.26
SH3GL3-205ENST00000563901 HTATSF1O43719 755 aaKnown RBP35.41■■■■□ 3.26
SH3GL3-205ENST00000563901 DCAF5Q96JK2 942 aa35.41■■■■□ 3.26
SH3GL3-205ENST00000563901 CEMIPQ8WUJ3 1361 aa35.4■■■■□ 3.26
SH3GL3-205ENST00000563901 ZBED9Q6R2W3 1325 aa35.39■■■■□ 3.26
SH3GL3-205ENST00000563901 HSP90AB1P08238 724 aaKnown RBP35.39■■■■□ 3.26
SH3GL3-205ENST00000563901 KRT27Q7Z3Y8 459 aa35.39■■■■□ 3.26
SH3GL3-205ENST00000563901 NCBP3Q53F19 620 aaKnown RBP35.39■■■■□ 3.26
SH3GL3-205ENST00000563901 NGEFQ8N5V2 710 aa35.39■■■■□ 3.26
SH3GL3-205ENST00000563901 SBF2Q86WG5 1849 aa35.37■■■■□ 3.25
SH3GL3-205ENST00000563901 MRC1P22897 1456 aa35.35■■■■□ 3.25
SH3GL3-205ENST00000563901 ACSBG1Q96GR2 724 aa35.35■■■■□ 3.25
SH3GL3-205ENST00000563901 SPINK5Q9NQ38 1064 aaPredicted RBP35.33■■■■□ 3.25
SH3GL3-205ENST00000563901 EP400Q96L91 3159 aa35.33■■■■□ 3.25
SH3GL3-205ENST00000563901 CDCA7LQ96GN5 454 aa35.32■■■■□ 3.24
SH3GL3-205ENST00000563901 TEFQ10587 303 aa35.31■■■■□ 3.24
SH3GL3-205ENST00000563901 LAS1LQ9Y4W2 734 aaKnown RBP35.31■■■■□ 3.24
SH3GL3-205ENST00000563901 NFATC2IPQ8NCF5 419 aa35.3■■■■□ 3.24
SH3GL3-205ENST00000563901 SLC52A2Q9HAB3 445 aa35.3■■■■□ 3.24
SH3GL3-205ENST00000563901 WDR63Q8IWG1 891 aa35.29■■■■□ 3.24
SH3GL3-205ENST00000563901 MIS18AQ9NYP9 233 aa35.29■■■■□ 3.24
SH3GL3-205ENST00000563901 NHSQ6T4R5 1651 aa35.29■■■■□ 3.24
SH3GL3-205ENST00000563901 CABP4P57796 275 aa35.28■■■■□ 3.24
SH3GL3-205ENST00000563901 SYTL4Q96C24 671 aaPredicted RBP35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms