RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
TCF4-221ENST00000563888 E9PCH4 1651 aa11.08□□□□□ -0.64
TCF4-221ENST00000563888 PDE3BQ13370 1112 aa11.08□□□□□ -0.64
TCF4-221ENST00000563888 FHDC1Q9C0D6 1143 aaPredicted RBP11.08□□□□□ -0.64
TCF4-221ENST00000563888 NAIPQ13075 1403 aa11.08□□□□□ -0.64
TCF4-221ENST00000563888 SYT17Q9BSW7 474 aa11.07□□□□□ -0.64
TCF4-221ENST00000563888 USP35Q9P2H5 1018 aa11.07□□□□□ -0.64
TCF4-221ENST00000563888 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
TCF4-221ENST00000563888 TNS3Q68CZ2 1445 aa11.07□□□□□ -0.64
TCF4-221ENST00000563888 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
TCF4-221ENST00000563888 STRN4Q9NRL3 753 aa11.06□□□□□ -0.64
TCF4-221ENST00000563888 PLSCR2Q9NRY7 297 aa11.06□□□□□ -0.64
TCF4-221ENST00000563888 ADGRB2O60241 1585 aa11.06□□□□□ -0.64
TCF4-221ENST00000563888 PLCH1Q4KWH8 1693 aa11.05□□□□□ -0.64
TCF4-221ENST00000563888 FCHSD2O94868 740 aa11.05□□□□□ -0.64
TCF4-221ENST00000563888 TNS1Q9HBL0 1735 aaKnown RBP11.05□□□□□ -0.64
TCF4-221ENST00000563888 ANO8Q9HCE9 1232 aaPredicted RBP11.05□□□□□ -0.64
TCF4-221ENST00000563888 GPR162Q16538 588 aa11.04□□□□□ -0.64
TCF4-221ENST00000563888 PCDHGA4Q9Y5G9 962 aa11.04□□□□□ -0.64
TCF4-221ENST00000563888 NWD2Q9ULI1 1742 aa11.04□□□□□ -0.64
TCF4-221ENST00000563888 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 CDC42BPGQ6DT37 1551 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 IQGAP3Q86VI3 1631 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 EPAS1Q99814 870 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 PRDM11Q9NQV5 511 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 GTF3C3Q9Y5Q9 886 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 NEXMIFQ5QGS0 1516 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 SPATA31A1Q5TZJ5 1347 aa11.03□□□□□ -0.64
TCF4-221ENST00000563888 GNPATO15228 680 aa11.02□□□□□ -0.65
TCF4-221ENST00000563888 HIC1Q14526 733 aa11.02□□□□□ -0.65
TCF4-221ENST00000563888 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.65
TCF4-221ENST00000563888 SBNO1A3KN83 1393 aa11.02□□□□□ -0.65
TCF4-221ENST00000563888 PLEKHH1Q9ULM0 1364 aa11.02□□□□□ -0.65
TCF4-221ENST00000563888 PHF14O94880 888 aa11.01□□□□□ -0.65
TCF4-221ENST00000563888 CHRNA2Q15822 529 aa11.01□□□□□ -0.65
TCF4-221ENST00000563888 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
TCF4-221ENST00000563888 NRKQ7Z2Y5 1582 aa11.01□□□□□ -0.65
TCF4-221ENST00000563888 RIMBP2O15034 1052 aa11□□□□□ -0.65
TCF4-221ENST00000563888 EVA1CP58658 441 aa11□□□□□ -0.65
TCF4-221ENST00000563888 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
TCF4-221ENST00000563888 TRIM66O15016 1216 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 GPR37O15354 613 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 MAP3K7O43318 606 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 CDAN1Q8IWY9 1227 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 ZNF710Q8N1W2 664 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
TCF4-221ENST00000563888 PRAG1Q86YV5 1406 aa10.99□□□□□ -0.65
TCF4-221ENST00000563888 NUP188Q5SRE5 1749 aa10.98□□□□□ -0.65
TCF4-221ENST00000563888 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
TCF4-221ENST00000563888 ITGAEP38570 1179 aa10.98□□□□□ -0.65
TCF4-221ENST00000563888 IRF6O14896 467 aa10.97□□□□□ -0.65
TCF4-221ENST00000563888 PDE4DQ08499 809 aa10.97□□□□□ -0.65
TCF4-221ENST00000563888 SAFB2Q14151 953 aaKnown RBP eCLIP10.97□□□□□ -0.65
TCF4-221ENST00000563888 ARXQ96QS3 562 aa10.97□□□□□ -0.65
TCF4-221ENST00000563888 THSD7AQ9UPZ6 1657 aa10.97□□□□□ -0.65
TCF4-221ENST00000563888 NRAPQ86VF7 1730 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 RREB1Q92766 1687 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 TECPR2O15040 1411 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 RPGRIP1LQ68CZ1 1315 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 EMP3P54852 163 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 PTF1AQ7RTS3 328 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 STK32BQ9NY57 414 aa10.96□□□□□ -0.65
TCF4-221ENST00000563888 RRBP1Q9P2E9 1410 aaKnown RBP10.95□□□□□ -0.66
TCF4-221ENST00000563888 HSPA6P17066 643 aa10.95□□□□□ -0.66
TCF4-221ENST00000563888 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
TCF4-221ENST00000563888 PTGDRQ13258 359 aa10.95□□□□□ -0.66
TCF4-221ENST00000563888 FBXW7Q969H0 707 aa10.95□□□□□ -0.66
TCF4-221ENST00000563888 PCDHGA10Q9Y5H3 936 aa10.95□□□□□ -0.66
TCF4-221ENST00000563888 MYOM1P52179 1685 aa10.95□□□□□ -0.66
TCF4-221ENST00000563888 KIAA0232Q92628 1395 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 ADGRF5Q8IZF2 1346 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 LOC105371045A0A1W2PR82 267 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 PLSCR1O15162 318 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
TCF4-221ENST00000563888 LARP1Q6PKG0 1096 aaKnown RBP10.94□□□□□ -0.66
TCF4-221ENST00000563888 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 MTFR1LQ9H019 292 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
TCF4-221ENST00000563888 KIF1AQ12756 1690 aa10.94□□□□□ -0.66
TCF4-221ENST00000563888 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
TCF4-221ENST00000563888 COL14A1Q05707 1796 aaKnown RBP10.93□□□□□ -0.66
TCF4-221ENST00000563888 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
TCF4-221ENST00000563888 TCP11L2Q8N4U5 519 aa10.93□□□□□ -0.66
TCF4-221ENST00000563888 CLTCL1P53675 1640 aa10.93□□□□□ -0.66
TCF4-221ENST00000563888 GPRASP1Q5JY77 1395 aa10.92□□□□□ -0.66
TCF4-221ENST00000563888 ABCC11Q96J66 1382 aa10.92□□□□□ -0.66
TCF4-221ENST00000563888 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
TCF4-221ENST00000563888 FECHP22830 423 aa10.92□□□□□ -0.66
TCF4-221ENST00000563888 SLC15A2Q16348 729 aa10.92□□□□□ -0.66
TCF4-221ENST00000563888 KDM4CQ9H3R0 1056 aa10.92□□□□□ -0.66
TCF4-221ENST00000563888 DLC1Q96QB1 1528 aa10.91□□□□□ -0.66
TCF4-221ENST00000563888 NUDT7P0C024 238 aa10.91□□□□□ -0.66
TCF4-221ENST00000563888 RGL3Q3MIN7 710 aa10.91□□□□□ -0.66
TCF4-221ENST00000563888 NUTM2GQ5VZR2 741 aa10.91□□□□□ -0.66
TCF4-221ENST00000563888 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
TCF4-221ENST00000563888 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms