RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 PTGS1P23219 599 aa14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 TERF2Q15554 542 aa14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 ADGRB2O60241 1585 aa14.88□□□□□ -0.03
SCAMP2-204ENST00000563829 TIGD1Q96MW7 591 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 UPF3BQ9BZI7 483 aaKnown RBP14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 IFT57Q9NWB7 429 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 ADGRL1O94910 1474 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 GOLGA6L6A8MZA4 724 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 VAMP4O75379 141 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 ZNF592Q92610 1267 aa14.87□□□□□ -0.03
SCAMP2-204ENST00000563829 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
SCAMP2-204ENST00000563829 FIBPO43427 364 aa14.86□□□□□ -0.03
SCAMP2-204ENST00000563829 TMEM132EQ6IEE7 984 aa14.86□□□□□ -0.03
SCAMP2-204ENST00000563829 PALD1Q9ULE6 856 aa14.86□□□□□ -0.03
SCAMP2-204ENST00000563829 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 KIF18AQ8NI77 898 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 SRCIN1Q9C0H9 1055 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 TNNT1P13805 278 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 LRMPQ12912 555 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 DRC7Q8IY82 874 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 TCHHQ07283 1943 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 CUL4AQ13619 759 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 ARHGAP45Q92619 1136 aa14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 V9GYY5 206 aaPredicted RBP14.85□□□□□ -0.03
SCAMP2-204ENST00000563829 TPM3P06753 285 aa14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 MCM2P49736 904 aa14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 KRT222Q8N1A0 295 aa14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 CCDC112Q8NEF3 446 aa14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 MORC2Q9Y6X9 1032 aaPredicted RBP14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 CLTCL1P53675 1640 aa14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 TAF7LQ5H9L4 462 aa14.84□□□□□ -0.03
SCAMP2-204ENST00000563829 TSHZ3Q63HK5 1081 aa14.83□□□□□ -0.03
SCAMP2-204ENST00000563829 DNAJC2Q99543 621 aaKnown RBP14.83□□□□□ -0.03
SCAMP2-204ENST00000563829 ABCC4O15439 1325 aa14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 SMTNL1A8MU46 457 aa14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 CCDC186Q7Z3E2 898 aa14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 ANO2Q9NQ90 1003 aa14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 INTS4Q96HW7 963 aaKnown RBP14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 ST7Q9NRC1 585 aa14.83□□□□□ -0.04
SCAMP2-204ENST00000563829 PPRC1Q5VV67 1664 aaKnown RBP14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 DTNBO60941 627 aa14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 TRPM2O94759 1503 aa14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 PREX2Q70Z35 1606 aa14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 BRPF1P55201 1214 aaPredicted RBP14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 UBE2HP62256 183 aa14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 CERS3Q8IU89 383 aa14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 CHMP3Q9Y3E7 222 aa14.82□□□□□ -0.04
SCAMP2-204ENST00000563829 ZNF428Q96B54 188 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 TRAPPC8Q9Y2L5 1435 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 TRIM6-TRIM34B2RNG4 842 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 DIAPH1O60610 1272 aaKnown RBP14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 MCCP23508 829 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 LARP6Q9BRS8 491 aaKnown RBP14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 TRIM34Q9BYJ4 488 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 CABP2Q9NPB3 220 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 NRBP1Q9UHY1 535 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 CAPN2P17655 700 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 TPD52L1Q16890 204 aaPredicted RBP14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 TWISTNBQ3B726 338 aaPredicted RBP14.81□□□□□ -0.04
SCAMP2-204ENST00000563829 NPHP1O15259 732 aa14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 PTCH1Q13635 1447 aa14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 KMT5BQ4FZB7 885 aa14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 API5Q9BZZ5 524 aaKnown RBP14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 CALCOCO1Q9P1Z2 691 aa14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 ABCA6Q8N139 1617 aa14.8□□□□□ -0.04
SCAMP2-204ENST00000563829 SBNO2Q9Y2G9 1366 aa14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 SYCP1Q15431 976 aa14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 RTF1Q92541 710 aaKnown RBP14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 ANKRD44Q8N8A2 993 aa14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 FUCA2Q9BTY2 467 aa14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 LUZP1Q86V48 1076 aa14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
SCAMP2-204ENST00000563829 HMOX1P09601 288 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 AEBP1Q8IUX7 1158 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 RILPL2Q969X0 211 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 PAXBP1Q9Y5B6 917 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 UGGT1Q9NYU2 1555 aa14.78□□□□□ -0.04
SCAMP2-204ENST00000563829 CCDC192P0DO97 292 aa14.77□□□□□ -0.04
SCAMP2-204ENST00000563829 CAMK4Q16566 473 aa14.77□□□□□ -0.04
SCAMP2-204ENST00000563829 KRT24Q2M2I5 525 aa14.77□□□□□ -0.04
SCAMP2-204ENST00000563829 CEP85Q6P2H3 762 aa14.77□□□□□ -0.04
SCAMP2-204ENST00000563829 TMEM87AQ8NBN3 555 aa14.77□□□□□ -0.04
SCAMP2-204ENST00000563829 ZSCAN22P10073 491 aaPredicted RBP14.77□□□□□ -0.05
SCAMP2-204ENST00000563829 ESYT1Q9BSJ8 1104 aa14.77□□□□□ -0.05
SCAMP2-204ENST00000563829 ZNF215Q9UL58 517 aaPredicted RBP14.77□□□□□ -0.05
SCAMP2-204ENST00000563829 ZNF397Q8NF99 534 aaPredicted RBP14.77□□□□□ -0.05
SCAMP2-204ENST00000563829 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.05
SCAMP2-204ENST00000563829 TRIM5Q9C035 493 aa14.77□□□□□ -0.05
SCAMP2-204ENST00000563829 PDE1AP54750 535 aa14.76□□□□□ -0.05
SCAMP2-204ENST00000563829 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms