RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 CRB1P82279 1406 aa30.73■■■□□ 2.51
ZNF688-204ENST00000563665 GNAT3A8MTJ3 354 aa30.73■■■□□ 2.51
ZNF688-204ENST00000563665 TOM1L2Q6ZVM7 507 aa30.73■■■□□ 2.51
ZNF688-204ENST00000563665 RTF1Q92541 710 aaKnown RBP30.73■■■□□ 2.51
ZNF688-204ENST00000563665 IFT57Q9NWB7 429 aa30.73■■■□□ 2.51
ZNF688-204ENST00000563665 BTG4Q9NY30 223 aa30.73■■■□□ 2.51
ZNF688-204ENST00000563665 RCAN3Q9UKA8 241 aa30.73■■■□□ 2.51
ZNF688-204ENST00000563665 SUPT16HQ9Y5B9 1047 aaKnown RBP30.73■■■□□ 2.51
ZNF688-204ENST00000563665 SPATA31A6Q5VVP1 1343 aa30.72■■■□□ 2.51
ZNF688-204ENST00000563665 TATP17735 454 aaPredicted RBP30.72■■■□□ 2.51
ZNF688-204ENST00000563665 EVA1CP58658 441 aa30.72■■■□□ 2.51
ZNF688-204ENST00000563665 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.72■■■□□ 2.51
ZNF688-204ENST00000563665 FANCIQ9NVI1 1328 aa30.71■■■□□ 2.51
ZNF688-204ENST00000563665 THUMPD2Q9BTF0 503 aaKnown RBP30.71■■■□□ 2.51
ZNF688-204ENST00000563665 RNF123Q5XPI4 1314 aa30.7■■■□□ 2.51
ZNF688-204ENST00000563665 ZNF853P0CG23 659 aa30.7■■■□□ 2.5
ZNF688-204ENST00000563665 GNAI1P63096 354 aa30.7■■■□□ 2.5
ZNF688-204ENST00000563665 ADAMTS7Q9UKP4 1686 aa30.7■■■□□ 2.5
ZNF688-204ENST00000563665 OVOS2A0A0G2JMS6 1433 aa30.69■■■□□ 2.5
ZNF688-204ENST00000563665 LARP1Q6PKG0 1096 aaKnown RBP30.69■■■□□ 2.5
ZNF688-204ENST00000563665 STRN4Q9NRL3 753 aa30.69■■■□□ 2.5
ZNF688-204ENST00000563665 DCTN1Q14203 1278 aa30.68■■■□□ 2.5
ZNF688-204ENST00000563665 ZNF530Q6P9A1 599 aaPredicted RBP30.68■■■□□ 2.5
ZNF688-204ENST00000563665 WNK3Q9BYP7 1800 aa30.68■■■□□ 2.5
ZNF688-204ENST00000563665 SLIT2O94813 1529 aa30.68■■■□□ 2.5
ZNF688-204ENST00000563665 NUTM2BA6NNL0 878 aaPredicted RBP30.67■■■□□ 2.5
ZNF688-204ENST00000563665 NUTM2EB1AL46 878 aaPredicted RBP30.67■■■□□ 2.5
ZNF688-204ENST00000563665 ADAMTS2O95450 1211 aa30.67■■■□□ 2.5
ZNF688-204ENST00000563665 AKAP4Q5JQC9 854 aa30.67■■■□□ 2.5
ZNF688-204ENST00000563665 MCM10Q7L590 875 aa30.67■■■□□ 2.5
ZNF688-204ENST00000563665 NUTM2AQ8IVF1 878 aaPredicted RBP30.67■■■□□ 2.5
ZNF688-204ENST00000563665 CFAP44Q96MT7 982 aa30.67■■■□□ 2.5
ZNF688-204ENST00000563665 HSPA1LP34931 641 aa30.65■■■□□ 2.5
ZNF688-204ENST00000563665 CT47B1P0C2W7 299 aaPredicted RBP30.64■■■□□ 2.5
ZNF688-204ENST00000563665 TSR2Q969E8 191 aaKnown RBP30.64■■■□□ 2.5
ZNF688-204ENST00000563665 SPG7Q9UQ90 795 aa30.64■■■□□ 2.5
ZNF688-204ENST00000563665 CEMIPQ8WUJ3 1361 aa30.64■■■□□ 2.5
ZNF688-204ENST00000563665 GTF3C3Q9Y5Q9 886 aa30.64■■■□□ 2.49
ZNF688-204ENST00000563665 SCN11AQ9UI33 1791 aa30.63■■■□□ 2.49
ZNF688-204ENST00000563665 C1orf141Q5JVX7 400 aa30.63■■■□□ 2.49
ZNF688-204ENST00000563665 SHANK3Q9BYB0 1731 aa30.62■■■□□ 2.49
ZNF688-204ENST00000563665 NEFLP07196 543 aa30.61■■■□□ 2.49
ZNF688-204ENST00000563665 IL17REQ8NFR9 667 aa30.61■■■□□ 2.49
ZNF688-204ENST00000563665 LRP6O75581 1613 aa30.61■■■□□ 2.49
ZNF688-204ENST00000563665 CHL1O00533 1208 aa30.6■■■□□ 2.49
ZNF688-204ENST00000563665 IL2RBP14784 551 aa30.6■■■□□ 2.49
ZNF688-204ENST00000563665 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.59■■■□□ 2.49
ZNF688-204ENST00000563665 SIPA1L3O60292 1781 aaPredicted RBP30.59■■■□□ 2.49
ZNF688-204ENST00000563665 MBIPQ9NS73 344 aa30.59■■■□□ 2.49
ZNF688-204ENST00000563665 LAS1LQ9Y4W2 734 aaKnown RBP30.59■■■□□ 2.49
ZNF688-204ENST00000563665 DISP2A7MBM2 1401 aa30.58■■■□□ 2.49
ZNF688-204ENST00000563665 BABAM1Q9NWV8 329 aa30.57■■■□□ 2.48
ZNF688-204ENST00000563665 EXOSC9Q06265 439 aaKnown RBP30.56■■■□□ 2.48
ZNF688-204ENST00000563665 PHKG2P15735 406 aa30.55■■■□□ 2.48
ZNF688-204ENST00000563665 RRP1P56182 461 aaKnown RBP30.55■■■□□ 2.48
ZNF688-204ENST00000563665 KDM3BQ7LBC6 1761 aa30.54■■■□□ 2.48
ZNF688-204ENST00000563665 IFNL2Q8IZJ0 200 aa30.54■■■□□ 2.48
ZNF688-204ENST00000563665 PCDH11XQ9BZA7 1347 aa30.53■■■□□ 2.48
ZNF688-204ENST00000563665 PCDH11YQ9BZA8 1340 aa30.53■■■□□ 2.48
ZNF688-204ENST00000563665 RNMTO43148 476 aaKnown RBP30.53■■■□□ 2.48
ZNF688-204ENST00000563665 ZCRB1Q8TBF4 217 aaKnown RBP30.52■■■□□ 2.48
ZNF688-204ENST00000563665 HSP90AB1P08238 724 aaKnown RBP30.51■■■□□ 2.47
ZNF688-204ENST00000563665 TAF7Q15545 349 aaPredicted RBP30.51■■■□□ 2.47
ZNF688-204ENST00000563665 ZNF428Q96B54 188 aa30.51■■■□□ 2.47
ZNF688-204ENST00000563665 LGR6Q9HBX8 967 aa30.51■■■□□ 2.47
ZNF688-204ENST00000563665 THRAP3Q9Y2W1 955 aaKnown RBP30.51■■■□□ 2.47
ZNF688-204ENST00000563665 MRC1P22897 1456 aa30.5■■■□□ 2.47
ZNF688-204ENST00000563665 CYP27B1O15528 508 aa30.5■■■□□ 2.47
ZNF688-204ENST00000563665 FNBP4Q8N3X1 1017 aaPredicted RBP30.5■■■□□ 2.47
ZNF688-204ENST00000563665 KDM6AO15550 1401 aaPredicted RBP30.5■■■□□ 2.47
ZNF688-204ENST00000563665 SPATA31A1Q5TZJ5 1347 aa30.5■■■□□ 2.47
ZNF688-204ENST00000563665 RARSP54136 660 aaKnown RBP30.49■■■□□ 2.47
ZNF688-204ENST00000563665 MPRIPQ6WCQ1 1025 aa30.49■■■□□ 2.47
ZNF688-204ENST00000563665 BCL9LQ86UU0 1499 aa30.49■■■□□ 2.47
ZNF688-204ENST00000563665 UNC5CLQ8IV45 518 aa30.48■■■□□ 2.47
ZNF688-204ENST00000563665 C8orf37Q96NL8 207 aa30.48■■■□□ 2.47
ZNF688-204ENST00000563665 TSPYL4Q9UJ04 414 aa30.48■■■□□ 2.47
ZNF688-204ENST00000563665 SPATA31A5Q5VU36 1347 aa30.48■■■□□ 2.47
ZNF688-204ENST00000563665 SPATA31A7Q8IWB4 1347 aa30.48■■■□□ 2.47
ZNF688-204ENST00000563665 NGLY1Q96IV0 654 aa30.47■■■□□ 2.47
ZNF688-204ENST00000563665 CDCA7Q9BWT1 371 aaPredicted RBP30.47■■■□□ 2.47
ZNF688-204ENST00000563665 USP35Q9P2H5 1018 aa30.47■■■□□ 2.47
ZNF688-204ENST00000563665 TEFQ10587 303 aa30.47■■■□□ 2.47
ZNF688-204ENST00000563665 DCAF5Q96JK2 942 aa30.47■■■□□ 2.47
ZNF688-204ENST00000563665 FKBP8Q14318 412 aa30.46■■■□□ 2.47
ZNF688-204ENST00000563665 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.45■■■□□ 2.46
ZNF688-204ENST00000563665 NKX1-1Q15270 411 aaPredicted RBP30.43■■■□□ 2.46
ZNF688-204ENST00000563665 VPS72Q15906 364 aa30.43■■■□□ 2.46
ZNF688-204ENST00000563665 ERICH6BQ5W0A0 696 aa30.43■■■□□ 2.46
ZNF688-204ENST00000563665 TNS2Q63HR2 1409 aa30.43■■■□□ 2.46
ZNF688-204ENST00000563665 VAMP4O75379 141 aa30.42■■■□□ 2.46
ZNF688-204ENST00000563665 ALDH1L2Q3SY69 923 aa30.42■■■□□ 2.46
ZNF688-204ENST00000563665 BCAR3O75815 825 aa30.41■■■□□ 2.46
ZNF688-204ENST00000563665 TWISTNBQ3B726 338 aaPredicted RBP30.41■■■□□ 2.46
ZNF688-204ENST00000563665 BARGINQ6ZT62 677 aa30.41■■■□□ 2.46
ZNF688-204ENST00000563665 C8orf58Q8NAV2 365 aa30.41■■■□□ 2.46
ZNF688-204ENST00000563665 MIS18AQ9NYP9 233 aa30.41■■■□□ 2.46
ZNF688-204ENST00000563665 SOS1Q07889 1333 aaPredicted RBP30.41■■■□□ 2.46
ZNF688-204ENST00000563665 TSPYL6Q8N831 410 aa30.4■■■□□ 2.46
ZNF688-204ENST00000563665 MEX3CQ5U5Q3 659 aaKnown RBP30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms