RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ATP5J2-PTCD1G3V325 749 aa6.71□□□□□ -1.34
SHCBP1-202ENST00000563219 ITGA6P23229 1130 aa6.71□□□□□ -1.34
SHCBP1-202ENST00000563219 RNF144AP50876 292 aaPredicted RBP6.71□□□□□ -1.34
SHCBP1-202ENST00000563219 CC2D2BQ6DHV5 1058 aa6.71□□□□□ -1.34
SHCBP1-202ENST00000563219 KRT76Q01546 638 aa6.7□□□□□ -1.34
SHCBP1-202ENST00000563219 MCM6Q14566 821 aa6.7□□□□□ -1.34
SHCBP1-202ENST00000563219 LYSMD3Q7Z3D4 306 aa6.7□□□□□ -1.34
SHCBP1-202ENST00000563219 A0A1W2PRU2 124 aa6.69□□□□□ -1.34
SHCBP1-202ENST00000563219 SV2AQ7L0J3 742 aa6.69□□□□□ -1.34
SHCBP1-202ENST00000563219 VWA5B2Q8N398 1253 aa6.69□□□□□ -1.34
SHCBP1-202ENST00000563219 CNTNAP3BQ96NU0 1288 aa6.69□□□□□ -1.34
SHCBP1-202ENST00000563219 COL25A1Q9BXS0 654 aaPredicted RBP6.69□□□□□ -1.34
SHCBP1-202ENST00000563219 CNTNAP3Q9BZ76 1288 aa6.69□□□□□ -1.34
SHCBP1-202ENST00000563219 GPC1P35052 558 aa6.68□□□□□ -1.34
SHCBP1-202ENST00000563219 SCTRP47872 440 aa6.68□□□□□ -1.34
SHCBP1-202ENST00000563219 PRICKLE2Q7Z3G6 844 aa6.68□□□□□ -1.34
SHCBP1-202ENST00000563219 MEN1O00255 615 aa6.67□□□□□ -1.34
SHCBP1-202ENST00000563219 CYP2U1Q7Z449 544 aa6.67□□□□□ -1.34
SHCBP1-202ENST00000563219 PRM3Q9NNZ6 103 aa6.67□□□□□ -1.34
SHCBP1-202ENST00000563219 CEP126Q9P2H0 1117 aa6.67□□□□□ -1.34
SHCBP1-202ENST00000563219 TIMELESSQ9UNS1 1208 aa6.67□□□□□ -1.34
SHCBP1-202ENST00000563219 PCDHB11Q9Y5F2 797 aa6.67□□□□□ -1.34
SHCBP1-202ENST00000563219 CDC14CA4D256 554 aa6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 TRAK2O60296 914 aa6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 RNFT1Q5M7Z0 435 aa6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 C14orf37Q86TY3 774 aa6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 OSBPL3Q9H4L5 887 aa6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 TBC1D2BQ9UPU7 963 aa6.66□□□□□ -1.34
SHCBP1-202ENST00000563219 RHOQP17081 205 aa6.65□□□□□ -1.34
SHCBP1-202ENST00000563219 CLN3Q13286 438 aa6.65□□□□□ -1.34
SHCBP1-202ENST00000563219 NLRP3Q96P20 1036 aa6.65□□□□□ -1.34
SHCBP1-202ENST00000563219 GRIP2Q9C0E4 1043 aa6.65□□□□□ -1.34
SHCBP1-202ENST00000563219 EIF4G2P78344 907 aaKnown RBP eCLIP6.64□□□□□ -1.35
SHCBP1-202ENST00000563219 IRF5Q13568 498 aa6.64□□□□□ -1.35
SHCBP1-202ENST00000563219 SLC27A3Q5K4L6 730 aa6.64□□□□□ -1.35
SHCBP1-202ENST00000563219 CUEDC1Q9NWM3 386 aaPredicted RBP6.64□□□□□ -1.35
SHCBP1-202ENST00000563219 GNRH1P01148 92 aa6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 SLURP2P0DP57 97 aa6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 POU4F2Q12837 409 aa6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 PHTF2Q8N3S3 785 aa6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 GMCL1Q96IK5 515 aa6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 CCDC85AQ96PX6 553 aaPredicted RBP6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 CDCA7Q9BWT1 371 aaPredicted RBP6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 ARHGEF10LQ9HCE6 1279 aa6.63□□□□□ -1.35
SHCBP1-202ENST00000563219 WDR44Q5JSH3 913 aa6.62□□□□□ -1.35
SHCBP1-202ENST00000563219 TRIM22Q8IYM9 498 aa6.62□□□□□ -1.35
SHCBP1-202ENST00000563219 DYRK1BQ9Y463 629 aa6.62□□□□□ -1.35
SHCBP1-202ENST00000563219 SPATA31C2B4DYI2 1134 aa6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 MYCP01106 439 aaPredicted RBP6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 DBN1Q16643 649 aa6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 ZNF385CQ66K41 422 aaPredicted RBP6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 NBPF10Q6P3W6 841 aaKnown RBP6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 NBPF15Q8N660 670 aa6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 ZMYND15Q9H091 742 aa6.61□□□□□ -1.35
SHCBP1-202ENST00000563219 A6NJR5 290 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 UBTFP17480 764 aaKnown RBP6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 CENPCQ03188 943 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 USP4Q13107 963 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 CNKSR1Q969H4 720 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 ZNF837Q96EG3 531 aaPredicted RBP6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 GDPD2Q9HCC8 539 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 CHIC2Q9UKJ5 165 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 ADAMTS8Q9UP79 889 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 HRH3Q9Y5N1 445 aa6.6□□□□□ -1.35
SHCBP1-202ENST00000563219 H7C1W4 665 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 IL2RAP01589 272 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 SRSF11Q05519 484 aaKnown RBP6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 VAC14Q08AM6 782 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 KCNMA1Q12791 1236 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 GAS6Q14393 721 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 SLFNL1Q499Z3 407 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 FOXR1Q6PIV2 292 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 RIPOR1Q6ZS17 1223 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 WHAMMQ8TF30 809 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 XAGE2Q96GT9 111 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 GAS2L1Q99501 681 aaPredicted RBP6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 RAB6BQ9NRW1 208 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 COG6Q9Y2V7 657 aa6.59□□□□□ -1.35
SHCBP1-202ENST00000563219 WASLO00401 505 aaPredicted RBP6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 ARHGEF15O94989 841 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 ADAMTS2O95450 1211 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 ABL2P42684 1182 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 TAS1R3Q7RTX0 852 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 SVOPQ8N4V2 548 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 POM121Q96HA1 1249 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 TIMMDC1Q9NPL8 285 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 DOLKQ9UPQ8 538 aa6.58□□□□□ -1.36
SHCBP1-202ENST00000563219 RAD21O60216 631 aa6.57□□□□□ -1.36
SHCBP1-202ENST00000563219 F11P03951 625 aa6.57□□□□□ -1.36
SHCBP1-202ENST00000563219 GSK3AP49840 483 aa6.57□□□□□ -1.36
SHCBP1-202ENST00000563219 ESCO1Q5FWF5 840 aa6.57□□□□□ -1.36
SHCBP1-202ENST00000563219 RNF135Q8IUD6 432 aa6.57□□□□□ -1.36
SHCBP1-202ENST00000563219 CLUAP1Q96AJ1 413 aa6.57□□□□□ -1.36
SHCBP1-202ENST00000563219 LYPD4Q6UWN0 246 aa6.56□□□□□ -1.36
SHCBP1-202ENST00000563219 SIRT1Q96EB6 747 aa6.56□□□□□ -1.36
SHCBP1-202ENST00000563219 ZSCAN10Q96SZ4 725 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms