RNA–Protein interactions for RNA: ENST00000562890.1

SCAPER-204, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 3

Gene SCAPER, Length 671 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-204	ENST00000562890	PLSCR1	O15162	318 aa		9.23	□□□□□ -0.93
SCAPER-204	ENST00000562890	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.23	□□□□□ -0.93
SCAPER-204	ENST00000562890	KNSTRN	Q9Y448	316 aa		9.23	□□□□□ -0.93
SCAPER-204	ENST00000562890	NSD2	O96028	1365 aa		9.23	□□□□□ -0.93
SCAPER-204	ENST00000562890	TNS2	Q63HR2	1409 aa		9.22	□□□□□ -0.93
SCAPER-204	ENST00000562890	PPM1G	O15355	546 aa	Predicted RBP	9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	KCNQ2	O43526	872 aa		9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	TNNT2	P45379	298 aa	Predicted RBP	9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	MORC1	Q86VD1	984 aa		9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	PROM2	Q8N271	834 aa		9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	ZCRB1	Q8TBF4	217 aa	Known RBP	9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	EYA1	Q99502	592 aa		9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	SHANK3	Q9BYB0	1731 aa		9.21	□□□□□ -0.94
SCAPER-204	ENST00000562890	KAT6B	Q8WYB5	2073 aa		9.2	□□□□□ -0.94
SCAPER-204	ENST00000562890	USHBP1	Q8N6Y0	703 aa		9.2	□□□□□ -0.94
SCAPER-204	ENST00000562890	DDX54	Q8TDD1	881 aa	Known RBP	9.2	□□□□□ -0.94
SCAPER-204	ENST00000562890	SPINK5	Q9NQ38	1064 aa	Predicted RBP	9.2	□□□□□ -0.94
SCAPER-204	ENST00000562890	NCAPD2	Q15021	1401 aa		9.2	□□□□□ -0.94
SCAPER-204	ENST00000562890	TAT	P17735	454 aa	Predicted RBP	9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	EIF4A2	Q14240	407 aa	Known RBP	9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	ACSBG1	Q96GR2	724 aa		9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	PARD3	Q8TEW0	1356 aa		9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	SMG6	Q86US8	1419 aa	Known RBP	9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	MEGF6	O75095	1541 aa		9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	RREB1	Q92766	1687 aa		9.19	□□□□□ -0.94
SCAPER-204	ENST00000562890	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.18	□□□□□ -0.94
SCAPER-204	ENST00000562890	CAPN15	O75808	1086 aa		9.18	□□□□□ -0.94
SCAPER-204	ENST00000562890	NHS	Q6T4R5	1651 aa		9.18	□□□□□ -0.94
SCAPER-204	ENST00000562890	RGPD4	Q7Z3J3	1758 aa		9.18	□□□□□ -0.94
SCAPER-204	ENST00000562890	RAPGEF4	Q8WZA2	1011 aa		9.18	□□□□□ -0.94
SCAPER-204	ENST00000562890	NPC1L1	Q9UHC9	1359 aa		9.18	□□□□□ -0.94
SCAPER-204	ENST00000562890	NUP188	Q5SRE5	1749 aa		9.17	□□□□□ -0.94
SCAPER-204	ENST00000562890	CYP27B1	O15528	508 aa		9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	IL13	P35225	146 aa		9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	PRIM1	P49642	420 aa	Known RBP	9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	MTHFS	P49914	203 aa		9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	NKX1-1	Q15270	411 aa	Predicted RBP	9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	CC2D1B	Q5T0F9	858 aa	Known RBP	9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	9.16	□□□□□ -0.94	1e-6	■■■■□ 19.7
SCAPER-204	ENST00000562890	BTAF1	O14981	1849 aa		9.16	□□□□□ -0.94
SCAPER-204	ENST00000562890	IGSF1	Q8N6C5	1336 aa		9.15	□□□□□ -0.94
SCAPER-204	ENST00000562890	PKD1L3	Q7Z443	1732 aa		9.15	□□□□□ -0.94
SCAPER-204	ENST00000562890	PSD	A5PKW4	1024 aa	Predicted RBP	9.15	□□□□□ -0.94
SCAPER-204	ENST00000562890	TXNRD1	Q16881	649 aa		9.15	□□□□□ -0.94
SCAPER-204	ENST00000562890	NBPF14	Q5TI25	921 aa		9.15	□□□□□ -0.94
SCAPER-204	ENST00000562890	R3HDM1	Q15032	1099 aa	Known RBP	9.14	□□□□□ -0.95
SCAPER-204	ENST00000562890	SPG7	Q9UQ90	795 aa		9.14	□□□□□ -0.95
SCAPER-204	ENST00000562890	ITGB4	P16144	1822 aa		9.14	□□□□□ -0.95
SCAPER-204	ENST00000562890	DOT1L	Q8TEK3	1739 aa		9.14	□□□□□ -0.95
SCAPER-204	ENST00000562890	PCDH11X	Q9BZA7	1347 aa		9.13	□□□□□ -0.95
SCAPER-204	ENST00000562890	PCDH11Y	Q9BZA8	1340 aa		9.13	□□□□□ -0.95
SCAPER-204	ENST00000562890	LRRC4B	Q9NT99	713 aa		9.13	□□□□□ -0.95
SCAPER-204	ENST00000562890	FOXD4L1	Q9NU39	408 aa		9.13	□□□□□ -0.95
SCAPER-204	ENST00000562890	PLEKHG2	Q9H7P9	1386 aa		9.12	□□□□□ -0.95
SCAPER-204	ENST00000562890	LY75	O60449	1722 aa		9.12	□□□□□ -0.95
SCAPER-204	ENST00000562890	MYCN	P04198	464 aa	Predicted RBP	9.12	□□□□□ -0.95
SCAPER-204	ENST00000562890	PHKG2	P15735	406 aa		9.12	□□□□□ -0.95
SCAPER-204	ENST00000562890	SULT6B1	Q6IMI4	303 aa		9.12	□□□□□ -0.95
SCAPER-204	ENST00000562890	IFNL2	Q8IZJ0	200 aa		9.12	□□□□□ -0.95
SCAPER-204	ENST00000562890	SLC15A2	Q16348	729 aa		9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	AMOT	Q4VCS5	1084 aa		9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	PLEKHO1	Q53GL0	409 aa	Predicted RBP	9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	SLC27A3	Q5K4L6	730 aa		9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	SAMD1	Q6SPF0	538 aa	Predicted RBP	9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	AEBP1	Q8IUX7	1158 aa		9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	SYTL4	Q96C24	671 aa	Predicted RBP	9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	TOGARAM1	Q9Y4F4	1720 aa		9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	KDR	P35968	1356 aa		9.11	□□□□□ -0.95
SCAPER-204	ENST00000562890	DIAPH1	O60610	1272 aa	Known RBP	9.1	□□□□□ -0.95
SCAPER-204	ENST00000562890	CNGB1	Q14028	1251 aa	Predicted RBP	9.1	□□□□□ -0.95
SCAPER-204	ENST00000562890	MPRIP	Q6WCQ1	1025 aa		9.1	□□□□□ -0.95
SCAPER-204	ENST00000562890	PIGB	Q92521	554 aa		9.1	□□□□□ -0.95
SCAPER-204	ENST00000562890	PPP2R1A	P30153	589 aa		9.09	□□□□□ -0.95
SCAPER-204	ENST00000562890	AKT1S1	Q96B36	256 aa		9.09	□□□□□ -0.95
SCAPER-204	ENST00000562890	PDGFD	Q9GZP0	370 aa	Predicted RBP	9.09	□□□□□ -0.95
SCAPER-204	ENST00000562890	PAPPA	Q13219	1627 aa		9.09	□□□□□ -0.95
SCAPER-204	ENST00000562890	COL3A1	P02461	1466 aa	Predicted RBP	9.08	□□□□□ -0.96
SCAPER-204	ENST00000562890	ERVV-2	B6SEH9	535 aa		9.08	□□□□□ -0.96
SCAPER-204	ENST00000562890	ZEB1	P37275	1124 aa	Predicted RBP	9.08	□□□□□ -0.96
SCAPER-204	ENST00000562890	KCNQ4	P56696	695 aa		9.08	□□□□□ -0.96
SCAPER-204	ENST00000562890	STK32B	Q9NY57	414 aa		9.08	□□□□□ -0.96
SCAPER-204	ENST00000562890	LRP5	O75197	1615 aa		9.08	□□□□□ -0.96
SCAPER-204	ENST00000562890	CASZ1	Q86V15	1759 aa		9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	HSP90AB1	P08238	724 aa	Known RBP	9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	HMOX1	P09601	288 aa		9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	DSG3	P32926	999 aa		9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	DCAF5	Q96JK2	942 aa		9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	VIRMA	Q69YN4	1812 aa	Known RBP	9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	TAF1L	Q8IZX4	1826 aa		9.07	□□□□□ -0.96
SCAPER-204	ENST00000562890	QSER1	Q2KHR3	1735 aa		9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	ZBTB22	O15209	634 aa		9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	DDX10	Q13206	875 aa	Known RBP	9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	ZNF827	Q17R98	1081 aa		9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	MTHFSD	Q2M296	383 aa	Known RBP	9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	AKAP4	Q5JQC9	854 aa		9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	ZNF530	Q6P9A1	599 aa	Predicted RBP	9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	SMARCC1	Q92922	1105 aa	Predicted RBP	9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	ATG3	Q9NT62	314 aa		9.06	□□□□□ -0.96
SCAPER-204	ENST00000562890	CCNL1	Q9UK58	526 aa	Predicted RBP	9.06	□□□□□ -0.96

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