RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 MARCH10Q8NA82 808 aaPredicted RBP22.22■■□□□ 1.15
PKD1-226ENST00000562425 TATP17735 454 aaPredicted RBP22.21■■□□□ 1.15
PKD1-226ENST00000562425 EIF4A2Q14240 407 aaKnown RBP22.21■■□□□ 1.15
PKD1-226ENST00000562425 MTHFSP49914 203 aa22.2■■□□□ 1.14
PKD1-226ENST00000562425 ZCRB1Q8TBF4 217 aaKnown RBP22.2■■□□□ 1.14
PKD1-226ENST00000562425 EYA1Q99502 592 aa22.2■■□□□ 1.14
PKD1-226ENST00000562425 SBF2Q86WG5 1849 aa22.18■■□□□ 1.14
PKD1-226ENST00000562425 BCL9O00512 1426 aa22.17■■□□□ 1.14
PKD1-226ENST00000562425 DDX10Q13206 875 aaKnown RBP22.17■■□□□ 1.14
PKD1-226ENST00000562425 PLSCR1O15162 318 aa22.16■■□□□ 1.14
PKD1-226ENST00000562425 DDX54Q8TDD1 881 aaKnown RBP22.16■■□□□ 1.14
PKD1-226ENST00000562425 SPON1Q9HCB6 807 aa22.16■■□□□ 1.14
PKD1-226ENST00000562425 RGPD2P0DJD1 1756 aa22.16■■□□□ 1.14
PKD1-226ENST00000562425 MEGF6O75095 1541 aa22.14■■□□□ 1.13
PKD1-226ENST00000562425 NCAPD2Q15021 1401 aa22.14■■□□□ 1.13
PKD1-226ENST00000562425 IGSF1Q8N6C5 1336 aa22.13■■□□□ 1.13
PKD1-226ENST00000562425 KCNQ2O43526 872 aa22.13■■□□□ 1.13
PKD1-226ENST00000562425 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
PKD1-226ENST00000562425 IL13P35225 146 aa22.12■■□□□ 1.13
PKD1-226ENST00000562425 CFAP53Q96M91 514 aa22.12■■□□□ 1.13
PKD1-226ENST00000562425 PPP1R1BQ9UD71 204 aaPredicted RBP22.12■■□□□ 1.13
PKD1-226ENST00000562425 SPG7Q9UQ90 795 aa22.12■■□□□ 1.13
PKD1-226ENST00000562425 DIAPH1O60610 1272 aaKnown RBP22.11■■□□□ 1.13
PKD1-226ENST00000562425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.11■■□□□ 1.13
PKD1-226ENST00000562425 PCDH11XQ9BZA7 1347 aa22.1■■□□□ 1.13
PKD1-226ENST00000562425 PCDH11YQ9BZA8 1340 aa22.1■■□□□ 1.13
PKD1-226ENST00000562425 PLEKHG2Q9H7P9 1386 aa22.1■■□□□ 1.13
PKD1-226ENST00000562425 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
PKD1-226ENST00000562425 DCAF8L1A6NGE4 600 aa22.08■■□□□ 1.13
PKD1-226ENST00000562425 ZNF316A6NFI3 1004 aaPredicted RBP22.07■■□□□ 1.12
PKD1-226ENST00000562425 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
PKD1-226ENST00000562425 CASZ1Q86V15 1759 aa22.07■■□□□ 1.12
PKD1-226ENST00000562425 YY1P25490 414 aa22.06■■□□□ 1.12
PKD1-226ENST00000562425 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
PKD1-226ENST00000562425 RALBP1Q15311 655 aa22.05■■□□□ 1.12
PKD1-226ENST00000562425 PLEKHO1Q53GL0 409 aaPredicted RBP22.05■■□□□ 1.12
PKD1-226ENST00000562425 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
PKD1-226ENST00000562425 CYP27B1O15528 508 aa22.03■■□□□ 1.12
PKD1-226ENST00000562425 NUDCQ9Y266 331 aa22.03■■□□□ 1.12
PKD1-226ENST00000562425 KDRP35968 1356 aa22.02■■□□□ 1.12
PKD1-226ENST00000562425 U2SURPO15042 1029 aaKnown RBP22.02■■□□□ 1.12
PKD1-226ENST00000562425 AEBP1Q8IUX7 1158 aa22.02■■□□□ 1.12
PKD1-226ENST00000562425 IFNL2Q8IZJ0 200 aa22.02■■□□□ 1.12
PKD1-226ENST00000562425 ANO8Q9HCE9 1232 aaPredicted RBP22.02■■□□□ 1.12
PKD1-226ENST00000562425 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
PKD1-226ENST00000562425 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
PKD1-226ENST00000562425 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
PKD1-226ENST00000562425 HMOX1P09601 288 aa21.99■■□□□ 1.11
PKD1-226ENST00000562425 NKX1-1Q15270 411 aaPredicted RBP21.99■■□□□ 1.11
PKD1-226ENST00000562425 PROM2Q8N271 834 aa21.99■■□□□ 1.11
PKD1-226ENST00000562425 COL3A1P02461 1466 aaPredicted RBP21.98■■□□□ 1.11
PKD1-226ENST00000562425 PKD1L3Q7Z443 1732 aa21.98■■□□□ 1.11
PKD1-226ENST00000562425 HSP90AB1P08238 724 aaKnown RBP21.98■■□□□ 1.11
PKD1-226ENST00000562425 PHKG2P15735 406 aa21.98■■□□□ 1.11
PKD1-226ENST00000562425 NHSQ6T4R5 1651 aa21.98■■□□□ 1.11
PKD1-226ENST00000562425 SHANK3Q9BYB0 1731 aa21.97■■□□□ 1.11
PKD1-226ENST00000562425 KAT6BQ8WYB5 2073 aa21.97■■□□□ 1.11
PKD1-226ENST00000562425 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
PKD1-226ENST00000562425 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
PKD1-226ENST00000562425 C1orf141Q5JVX7 400 aa21.96■■□□□ 1.11
PKD1-226ENST00000562425 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
PKD1-226ENST00000562425 U2AF1L5P0DN76 240 aaPredicted RBP21.93■■□□□ 1.1
PKD1-226ENST00000562425 U2AF1Q01081 240 aaKnown RBP eCLIP21.93■■□□□ 1.1
PKD1-226ENST00000562425 SLC15A2Q16348 729 aa21.93■■□□□ 1.1
PKD1-226ENST00000562425 DCAF5Q96JK2 942 aa21.93■■□□□ 1.1
PKD1-226ENST00000562425 MYBBP1AQ9BQG0 1328 aaKnown RBP21.92■■□□□ 1.1
PKD1-226ENST00000562425 PTGER2P43116 358 aa21.92■■□□□ 1.1
PKD1-226ENST00000562425 MPRIPQ6WCQ1 1025 aa21.92■■□□□ 1.1
PKD1-226ENST00000562425 ZBTB7AO95365 584 aa21.91■■□□□ 1.1
PKD1-226ENST00000562425 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
PKD1-226ENST00000562425 ERVV-2B6SEH9 535 aa21.9■■□□□ 1.1
PKD1-226ENST00000562425 FCHSD2O94868 740 aa21.9■■□□□ 1.1
PKD1-226ENST00000562425 PDGFDQ9GZP0 370 aaPredicted RBP21.9■■□□□ 1.1
PKD1-226ENST00000562425 MTFR1LQ9H019 292 aa21.9■■□□□ 1.1
PKD1-226ENST00000562425 PRKRIP1Q9H875 184 aaPredicted RBP21.9■■□□□ 1.1
PKD1-226ENST00000562425 AKAP4Q5JQC9 854 aa21.89■■□□□ 1.09
PKD1-226ENST00000562425 TMOD3Q9NYL9 352 aa21.89■■□□□ 1.09
PKD1-226ENST00000562425 BTAF1O14981 1849 aa21.88■■□□□ 1.09
PKD1-226ENST00000562425 HMGB2P26583 209 aaKnown RBP21.88■■□□□ 1.09
PKD1-226ENST00000562425 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
PKD1-226ENST00000562425 SMARCC1Q92922 1105 aaPredicted RBP21.88■■□□□ 1.09
PKD1-226ENST00000562425 PRKAR2BP31323 418 aa21.87■■□□□ 1.09
PKD1-226ENST00000562425 MTHFSDQ2M296 383 aaKnown RBP21.87■■□□□ 1.09
PKD1-226ENST00000562425 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
PKD1-226ENST00000562425 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
PKD1-226ENST00000562425 NEFMP07197 916 aa21.86■■□□□ 1.09
PKD1-226ENST00000562425 CABP4P57796 275 aa21.86■■□□□ 1.09
PKD1-226ENST00000562425 PIGBQ92521 554 aa21.86■■□□□ 1.09
PKD1-226ENST00000562425 RSPH6AQ9H0K4 717 aa21.86■■□□□ 1.09
PKD1-226ENST00000562425 ATF5Q9Y2D1 282 aaPredicted RBP21.86■■□□□ 1.09
PKD1-226ENST00000562425 PNNQ9H307 717 aaKnown RBP21.85■■□□□ 1.09
PKD1-226ENST00000562425 SGIP1Q9BQI5 828 aa21.84■■□□□ 1.09
PKD1-226ENST00000562425 CHD4Q14839 1912 aa21.83■■□□□ 1.09
PKD1-226ENST00000562425 SYT17Q9BSW7 474 aa21.83■■□□□ 1.09
PKD1-226ENST00000562425 FHDC1Q9C0D6 1143 aaPredicted RBP21.83■■□□□ 1.09
PKD1-226ENST00000562425 MAP3K5Q99683 1374 aa21.83■■□□□ 1.08
PKD1-226ENST00000562425 PALLDQ8WX93 1383 aa21.82■■□□□ 1.08
PKD1-226ENST00000562425 KDM6AO15550 1401 aaPredicted RBP21.81■■□□□ 1.08
PKD1-226ENST00000562425 PHACTR3Q96KR7 559 aa21.81■■□□□ 1.08
PKD1-226ENST00000562425 CCNL1Q9UK58 526 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms