RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 LRRC59Q96AG4 307 aaKnown RBP12.29□□□□□ -0.44
CDH13-205ENST00000562307 PLEKHG2Q9H7P9 1386 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
CDH13-205ENST00000562307 VAMP4O75379 141 aa12.28□□□□□ -0.44
CDH13-205ENST00000562307 AMOTQ4VCS5 1084 aa12.28□□□□□ -0.44
CDH13-205ENST00000562307 BABAM1Q9NWV8 329 aa12.28□□□□□ -0.44
CDH13-205ENST00000562307 LAS1LQ9Y4W2 734 aaKnown RBP12.28□□□□□ -0.44
CDH13-205ENST00000562307 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
CDH13-205ENST00000562307 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
CDH13-205ENST00000562307 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
CDH13-205ENST00000562307 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
CDH13-205ENST00000562307 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
CDH13-205ENST00000562307 KIAA0232Q92628 1395 aa12.27□□□□□ -0.45
CDH13-205ENST00000562307 MS4A1P11836 297 aa12.26□□□□□ -0.45
CDH13-205ENST00000562307 IL17REQ8NFR9 667 aa12.26□□□□□ -0.45
CDH13-205ENST00000562307 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
CDH13-205ENST00000562307 AAMPQ13685 434 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 AKAP4Q5JQC9 854 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 C8orf58Q8NAV2 365 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 AHDC1Q5TGY3 1603 aaPredicted RBP12.25□□□□□ -0.45
CDH13-205ENST00000562307 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
CDH13-205ENST00000562307 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
CDH13-205ENST00000562307 FRAT1Q92837 279 aaPredicted RBP12.24□□□□□ -0.45
CDH13-205ENST00000562307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
CDH13-205ENST00000562307 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
CDH13-205ENST00000562307 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
CDH13-205ENST00000562307 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
CDH13-205ENST00000562307 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
CDH13-205ENST00000562307 CHRNA2Q15822 529 aa12.23□□□□□ -0.45
CDH13-205ENST00000562307 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
CDH13-205ENST00000562307 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
CDH13-205ENST00000562307 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
CDH13-205ENST00000562307 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
CDH13-205ENST00000562307 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
CDH13-205ENST00000562307 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
CDH13-205ENST00000562307 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
CDH13-205ENST00000562307 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
CDH13-205ENST00000562307 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
CDH13-205ENST00000562307 PANK1Q8TE04 598 aa12.22□□□□□ -0.45
CDH13-205ENST00000562307 PRDM11Q9NQV5 511 aa12.22□□□□□ -0.45
CDH13-205ENST00000562307 NLRP2Q9NX02 1062 aa12.22□□□□□ -0.45
CDH13-205ENST00000562307 NOB1Q9ULX3 412 aaKnown RBP12.22□□□□□ -0.45
CDH13-205ENST00000562307 ROBO1Q9Y6N7 1651 aa12.22□□□□□ -0.45
CDH13-205ENST00000562307 WDR17Q8IZU2 1322 aa12.21□□□□□ -0.45
CDH13-205ENST00000562307 ABCA3Q99758 1704 aa12.21□□□□□ -0.45
CDH13-205ENST00000562307 RLBP1P12271 317 aa12.21□□□□□ -0.45
CDH13-205ENST00000562307 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
CDH13-205ENST00000562307 RAPGEF4Q8WZA2 1011 aa12.21□□□□□ -0.45
CDH13-205ENST00000562307 TSPYL4Q9UJ04 414 aa12.21□□□□□ -0.45
CDH13-205ENST00000562307 CSB-PGBD3P0DP91 1061 aa12.2□□□□□ -0.46
CDH13-205ENST00000562307 TRIM27P14373 513 aa12.2□□□□□ -0.46
CDH13-205ENST00000562307 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
CDH13-205ENST00000562307 LGR6Q9HBX8 967 aa12.2□□□□□ -0.46
CDH13-205ENST00000562307 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
CDH13-205ENST00000562307 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
CDH13-205ENST00000562307 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
CDH13-205ENST00000562307 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
CDH13-205ENST00000562307 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
CDH13-205ENST00000562307 TOM1O60784 492 aa12.19□□□□□ -0.46
CDH13-205ENST00000562307 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
CDH13-205ENST00000562307 C1orf141Q5JVX7 400 aa12.19□□□□□ -0.46
CDH13-205ENST00000562307 MIS18AQ9NYP9 233 aa12.19□□□□□ -0.46
CDH13-205ENST00000562307 SPG7Q9UQ90 795 aa12.19□□□□□ -0.46
CDH13-205ENST00000562307 COL5A2P05997 1499 aaPredicted RBP12.19□□□□□ -0.46
CDH13-205ENST00000562307 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
CDH13-205ENST00000562307 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
CDH13-205ENST00000562307 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
CDH13-205ENST00000562307 ADAMTS7Q9UKP4 1686 aa12.18□□□□□ -0.46
CDH13-205ENST00000562307 MEGF6O75095 1541 aa12.17□□□□□ -0.46
CDH13-205ENST00000562307 CLUAP1Q96AJ1 413 aa12.17□□□□□ -0.46
CDH13-205ENST00000562307 PHKG2P15735 406 aa12.16□□□□□ -0.46
CDH13-205ENST00000562307 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
CDH13-205ENST00000562307 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
CDH13-205ENST00000562307 API5Q9BZZ5 524 aaKnown RBP12.16□□□□□ -0.46
CDH13-205ENST00000562307 HOXB7P09629 217 aa12.15□□□□□ -0.46
CDH13-205ENST00000562307 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
CDH13-205ENST00000562307 TEFQ10587 303 aa12.15□□□□□ -0.46
CDH13-205ENST00000562307 CENPQQ7L2Z9 268 aaPredicted RBP12.15□□□□□ -0.46
CDH13-205ENST00000562307 IFNL2Q8IZJ0 200 aa12.15□□□□□ -0.46
CDH13-205ENST00000562307 DDX19BQ9UMR2 479 aa12.15□□□□□ -0.46
CDH13-205ENST00000562307 ABCC4O15439 1325 aa12.14□□□□□ -0.47
CDH13-205ENST00000562307 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
CDH13-205ENST00000562307 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
CDH13-205ENST00000562307 TMEM57Q8N5G2 664 aa12.14□□□□□ -0.47
CDH13-205ENST00000562307 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
CDH13-205ENST00000562307 COL16A1Q07092 1604 aaPredicted RBP12.14□□□□□ -0.47
CDH13-205ENST00000562307 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
CDH13-205ENST00000562307 PTPRCP08575 1304 aa12.13□□□□□ -0.47
CDH13-205ENST00000562307 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
CDH13-205ENST00000562307 CYP27B1O15528 508 aa12.13□□□□□ -0.47
CDH13-205ENST00000562307 EVA1CP58658 441 aa12.13□□□□□ -0.47
CDH13-205ENST00000562307 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
CDH13-205ENST00000562307 LARP1Q6PKG0 1096 aaKnown RBP12.13□□□□□ -0.47
CDH13-205ENST00000562307 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
CDH13-205ENST00000562307 HEG1Q9ULI3 1381 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms