RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 RGPD1P0DJD0 1748 aa22.24■■□□□ 1.15
LINC01225-201ENST00000562271 PDE3AQ14432 1141 aa22.23■■□□□ 1.15
LINC01225-201ENST00000562271 PLEKHF1Q96S99 279 aa22.23■■□□□ 1.15
LINC01225-201ENST00000562271 C8orf34Q49A92 452 aa22.23■■□□□ 1.15
LINC01225-201ENST00000562271 NEFMP07197 916 aa22.22■■□□□ 1.15
LINC01225-201ENST00000562271 BTG4Q9NY30 223 aa22.22■■□□□ 1.15
LINC01225-201ENST00000562271 LRP6O75581 1613 aa22.21■■□□□ 1.15
LINC01225-201ENST00000562271 TCP11L2Q8N4U5 519 aa22.21■■□□□ 1.15
LINC01225-201ENST00000562271 RUNDC1Q96C34 613 aa22.21■■□□□ 1.15
LINC01225-201ENST00000562271 ERBB3P21860 1342 aa22.21■■□□□ 1.15
LINC01225-201ENST00000562271 COL22A1Q8NFW1 1626 aaPredicted RBP22.21■■□□□ 1.15
LINC01225-201ENST00000562271 RGS3P49796 1198 aa22.2■■□□□ 1.14
LINC01225-201ENST00000562271 LARP1Q6PKG0 1096 aaKnown RBP22.2■■□□□ 1.14
LINC01225-201ENST00000562271 CSB-PGBD3P0DP91 1061 aa22.19■■□□□ 1.14
LINC01225-201ENST00000562271 NLRP2Q9NX02 1062 aa22.19■■□□□ 1.14
LINC01225-201ENST00000562271 LMO7Q8WWI1 1683 aa22.18■■□□□ 1.14
LINC01225-201ENST00000562271 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
LINC01225-201ENST00000562271 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
LINC01225-201ENST00000562271 EP400Q96L91 3159 aa22.18■■□□□ 1.14
LINC01225-201ENST00000562271 C8orf37Q96NL8 207 aa22.17■■□□□ 1.14
LINC01225-201ENST00000562271 IGSF1Q8N6C5 1336 aa22.16■■□□□ 1.14
LINC01225-201ENST00000562271 RTL1A6NKG5 1358 aa22.16■■□□□ 1.14
LINC01225-201ENST00000562271 CPDO75976 1380 aa22.16■■□□□ 1.14
LINC01225-201ENST00000562271 DLG5Q8TDM6 1919 aa22.16■■□□□ 1.14
LINC01225-201ENST00000562271 DCTN1Q14203 1278 aa22.16■■□□□ 1.14
LINC01225-201ENST00000562271 IL27Q8NEV9 243 aa22.16■■□□□ 1.14
LINC01225-201ENST00000562271 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
LINC01225-201ENST00000562271 COL5A2P05997 1499 aaPredicted RBP22.15■■□□□ 1.14
LINC01225-201ENST00000562271 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
LINC01225-201ENST00000562271 DAXXQ9UER7 740 aaPredicted RBP22.15■■□□□ 1.14
LINC01225-201ENST00000562271 WDR63Q8IWG1 891 aa22.14■■□□□ 1.14
LINC01225-201ENST00000562271 JCADQ9P266 1359 aa22.14■■□□□ 1.13
LINC01225-201ENST00000562271 IGHDP01880 384 aa22.14■■□□□ 1.13
LINC01225-201ENST00000562271 PLCH1Q4KWH8 1693 aa22.13■■□□□ 1.13
LINC01225-201ENST00000562271 PANK1Q8TE04 598 aa22.13■■□□□ 1.13
LINC01225-201ENST00000562271 COG6Q9Y2V7 657 aa22.13■■□□□ 1.13
LINC01225-201ENST00000562271 TOM1L2Q6ZVM7 507 aa22.12■■□□□ 1.13
LINC01225-201ENST00000562271 FCHSD2O94868 740 aa22.11■■□□□ 1.13
LINC01225-201ENST00000562271 RARSP54136 660 aaKnown RBP22.11■■□□□ 1.13
LINC01225-201ENST00000562271 CCDC27Q2M243 656 aa22.11■■□□□ 1.13
LINC01225-201ENST00000562271 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
LINC01225-201ENST00000562271 FRAT1Q92837 279 aaPredicted RBP22.11■■□□□ 1.13
LINC01225-201ENST00000562271 TMPOP42166 694 aaKnown RBP22.1■■□□□ 1.13
LINC01225-201ENST00000562271 EVA1CP58658 441 aa22.1■■□□□ 1.13
LINC01225-201ENST00000562271 FAM208AQ9UK61 1670 aaKnown RBP22.1■■□□□ 1.13
LINC01225-201ENST00000562271 MAPK8IP3Q9UPT6 1336 aa22.09■■□□□ 1.13
LINC01225-201ENST00000562271 KIF24Q5T7B8 1368 aa22.09■■□□□ 1.13
LINC01225-201ENST00000562271 MEGF6O75095 1541 aa22.09■■□□□ 1.13
LINC01225-201ENST00000562271 RIPK4P57078 832 aa22.09■■□□□ 1.13
LINC01225-201ENST00000562271 AAMPQ13685 434 aa22.09■■□□□ 1.13
LINC01225-201ENST00000562271 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
LINC01225-201ENST00000562271 SLC4A3P48751 1232 aa22.08■■□□□ 1.13
LINC01225-201ENST00000562271 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.13
LINC01225-201ENST00000562271 KDRP35968 1356 aa22.08■■□□□ 1.12
LINC01225-201ENST00000562271 NGLY1Q96IV0 654 aa22.08■■□□□ 1.12
LINC01225-201ENST00000562271 MCM10Q7L590 875 aa22.07■■□□□ 1.12
LINC01225-201ENST00000562271 WDR17Q8IZU2 1322 aa22.07■■□□□ 1.12
LINC01225-201ENST00000562271 COL14A1Q05707 1796 aaKnown RBP22.06■■□□□ 1.12
LINC01225-201ENST00000562271 MYH16Q9H6N6 1097 aa22.05■■□□□ 1.12
LINC01225-201ENST00000562271 CCDC9Q9Y3X0 531 aaKnown RBP22.03■■□□□ 1.12
LINC01225-201ENST00000562271 KAT6BQ8WYB5 2073 aa22.03■■□□□ 1.12
LINC01225-201ENST00000562271 MEX3CQ5U5Q3 659 aaKnown RBP22.03■■□□□ 1.12
LINC01225-201ENST00000562271 NRAPQ86VF7 1730 aa22.03■■□□□ 1.12
LINC01225-201ENST00000562271 NFKBIBQ15653 356 aa22.01■■□□□ 1.11
LINC01225-201ENST00000562271 NFE2L2Q16236 605 aa22.01■■□□□ 1.11
LINC01225-201ENST00000562271 BCL9LQ86UU0 1499 aa22.01■■□□□ 1.11
LINC01225-201ENST00000562271 MIS18AQ9NYP9 233 aa22.01■■□□□ 1.11
LINC01225-201ENST00000562271 RLBP1P12271 317 aa22■■□□□ 1.11
LINC01225-201ENST00000562271 TSR2Q969E8 191 aaKnown RBP22■■□□□ 1.11
LINC01225-201ENST00000562271 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
LINC01225-201ENST00000562271 VIRMAQ69YN4 1812 aaKnown RBP22■■□□□ 1.11
LINC01225-201ENST00000562271 SLIT2O94813 1529 aa21.99■■□□□ 1.11
LINC01225-201ENST00000562271 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
LINC01225-201ENST00000562271 MPRIPQ6WCQ1 1025 aa21.98■■□□□ 1.11
LINC01225-201ENST00000562271 PCDHB15Q9Y5E8 787 aa21.98■■□□□ 1.11
LINC01225-201ENST00000562271 NCAPD2Q15021 1401 aa21.98■■□□□ 1.11
LINC01225-201ENST00000562271 SPATA31A6Q5VVP1 1343 aa21.97■■□□□ 1.11
LINC01225-201ENST00000562271 RTN4Q9NQC3 1192 aaKnown RBP21.97■■□□□ 1.11
LINC01225-201ENST00000562271 TNNQ9UQP3 1299 aa21.97■■□□□ 1.11
LINC01225-201ENST00000562271 AFF2P51816 1311 aa21.97■■□□□ 1.11
LINC01225-201ENST00000562271 CT47B1P0C2W7 299 aaPredicted RBP21.96■■□□□ 1.11
LINC01225-201ENST00000562271 RAPGEF4Q8WZA2 1011 aa21.96■■□□□ 1.11
LINC01225-201ENST00000562271 CRB1P82279 1406 aa21.96■■□□□ 1.11
LINC01225-201ENST00000562271 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
LINC01225-201ENST00000562271 USP21Q9UK80 565 aa21.96■■□□□ 1.11
LINC01225-201ENST00000562271 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.95■■□□□ 1.1
LINC01225-201ENST00000562271 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
LINC01225-201ENST00000562271 FBXO41Q8TF61 875 aa21.95■■□□□ 1.1
LINC01225-201ENST00000562271 CARD10Q9BWT7 1032 aa21.95■■□□□ 1.1
LINC01225-201ENST00000562271 CYP27B1O15528 508 aa21.94■■□□□ 1.1
LINC01225-201ENST00000562271 FAM182BQ5T319 152 aa21.94■■□□□ 1.1
LINC01225-201ENST00000562271 IL17REQ8NFR9 667 aa21.94■■□□□ 1.1
LINC01225-201ENST00000562271 RWDD1Q9H446 243 aaPredicted RBP21.94■■□□□ 1.1
LINC01225-201ENST00000562271 ABCC6O95255 1503 aa21.94■■□□□ 1.1
LINC01225-201ENST00000562271 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
LINC01225-201ENST00000562271 KRT24Q2M2I5 525 aa21.93■■□□□ 1.1
LINC01225-201ENST00000562271 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
LINC01225-201ENST00000562271 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
LINC01225-201ENST00000562271 SHANK3Q9BYB0 1731 aa21.93■■□□□ 1.1
LINC01225-201ENST00000562271 MVPQ14764 893 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms