RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 SLC27A3Q5K4L6 730 aa17.56■□□□□ 0.4
HERC2-202ENST00000562136 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
HERC2-202ENST00000562136 LTV1Q96GA3 475 aaPredicted RBP17.56■□□□□ 0.4
HERC2-202ENST00000562136 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
HERC2-202ENST00000562136 NBPF6Q5VWK0 638 aa17.55■□□□□ 0.4
HERC2-202ENST00000562136 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
HERC2-202ENST00000562136 DDX54Q8TDD1 881 aaKnown RBP17.55■□□□□ 0.4
HERC2-202ENST00000562136 NBPF4Q96M43 638 aa17.55■□□□□ 0.4
HERC2-202ENST00000562136 INSRP06213 1382 aa17.54■□□□□ 0.4
HERC2-202ENST00000562136 MAP3K5Q99683 1374 aa17.54■□□□□ 0.4
HERC2-202ENST00000562136 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
HERC2-202ENST00000562136 RRS1Q15050 365 aaKnown RBP17.54■□□□□ 0.4
HERC2-202ENST00000562136 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
HERC2-202ENST00000562136 ATF5Q9Y2D1 282 aaPredicted RBP17.54■□□□□ 0.4
HERC2-202ENST00000562136 CARD14Q9BXL6 1004 aa17.53■□□□□ 0.4
HERC2-202ENST00000562136 NCAPD2Q15021 1401 aa17.53■□□□□ 0.4
HERC2-202ENST00000562136 PRIM1P49642 420 aaKnown RBP17.52■□□□□ 0.4
HERC2-202ENST00000562136 FLT4P35916 1363 aa17.52■□□□□ 0.39
HERC2-202ENST00000562136 YY1P25490 414 aa17.51■□□□□ 0.39
HERC2-202ENST00000562136 PKD1L3Q7Z443 1732 aa17.51■□□□□ 0.39
HERC2-202ENST00000562136 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
HERC2-202ENST00000562136 SYT17Q9BSW7 474 aa17.51■□□□□ 0.39
HERC2-202ENST00000562136 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
HERC2-202ENST00000562136 CHD4Q14839 1912 aa17.51■□□□□ 0.39
HERC2-202ENST00000562136 SMG6Q86US8 1419 aaKnown RBP17.5■□□□□ 0.39
HERC2-202ENST00000562136 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
HERC2-202ENST00000562136 FHDC1Q9C0D6 1143 aaPredicted RBP17.5■□□□□ 0.39
HERC2-202ENST00000562136 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
HERC2-202ENST00000562136 ITGB4P16144 1822 aa17.48■□□□□ 0.39
HERC2-202ENST00000562136 TAF1LQ8IZX4 1826 aa17.48■□□□□ 0.39
HERC2-202ENST00000562136 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
HERC2-202ENST00000562136 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
HERC2-202ENST00000562136 ARXQ96QS3 562 aa17.47■□□□□ 0.39
HERC2-202ENST00000562136 TOGARAM1Q9Y4F4 1720 aa17.47■□□□□ 0.39
HERC2-202ENST00000562136 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
HERC2-202ENST00000562136 USHBP1Q8N6Y0 703 aa17.46■□□□□ 0.39
HERC2-202ENST00000562136 RAPGEF4Q8WZA2 1011 aa17.46■□□□□ 0.39
HERC2-202ENST00000562136 C5P01031 1676 aa17.45■□□□□ 0.38
HERC2-202ENST00000562136 PCDH11XQ9BZA7 1347 aa17.45■□□□□ 0.38
HERC2-202ENST00000562136 PCDH11YQ9BZA8 1340 aa17.45■□□□□ 0.38
HERC2-202ENST00000562136 TATP17735 454 aaPredicted RBP17.44■□□□□ 0.38
HERC2-202ENST00000562136 SYTL4Q96C24 671 aaPredicted RBP17.44■□□□□ 0.38
HERC2-202ENST00000562136 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
HERC2-202ENST00000562136 WASHC2AQ641Q2 1341 aa17.44■□□□□ 0.38
HERC2-202ENST00000562136 CYP27B1O15528 508 aa17.43■□□□□ 0.38
HERC2-202ENST00000562136 KCNQ4P56696 695 aa17.42■□□□□ 0.38
HERC2-202ENST00000562136 NKX1-1Q15270 411 aaPredicted RBP17.42■□□□□ 0.38
HERC2-202ENST00000562136 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
HERC2-202ENST00000562136 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
HERC2-202ENST00000562136 PLEKHG2Q9H7P9 1386 aa17.41■□□□□ 0.38
HERC2-202ENST00000562136 HMGB2P26583 209 aaKnown RBP17.4■□□□□ 0.38
HERC2-202ENST00000562136 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.4■□□□□ 0.38
HERC2-202ENST00000562136 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
HERC2-202ENST00000562136 UBR3Q6ZT12 1888 aa17.38■□□□□ 0.37
HERC2-202ENST00000562136 POLD1P28340 1107 aa17.37■□□□□ 0.37
HERC2-202ENST00000562136 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
HERC2-202ENST00000562136 EYA1Q99502 592 aa17.37■□□□□ 0.37
HERC2-202ENST00000562136 C4BP0C0L5 1744 aa17.37■□□□□ 0.37
HERC2-202ENST00000562136 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
HERC2-202ENST00000562136 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
HERC2-202ENST00000562136 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
HERC2-202ENST00000562136 PIGBQ92521 554 aa17.34■□□□□ 0.37
HERC2-202ENST00000562136 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
HERC2-202ENST00000562136 SPG7Q9UQ90 795 aa17.34■□□□□ 0.37
HERC2-202ENST00000562136 ZNF831Q5JPB2 1677 aa17.33■□□□□ 0.37
HERC2-202ENST00000562136 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
HERC2-202ENST00000562136 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.36
HERC2-202ENST00000562136 PPM1GO15355 546 aaPredicted RBP17.31■□□□□ 0.36
HERC2-202ENST00000562136 EIF4A2Q14240 407 aaKnown RBP17.31■□□□□ 0.36
HERC2-202ENST00000562136 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
HERC2-202ENST00000562136 IGSF1Q8N6C5 1336 aa17.3■□□□□ 0.36
HERC2-202ENST00000562136 HSPA5P11021 654 aaKnown RBP17.3■□□□□ 0.36
HERC2-202ENST00000562136 PHKG2P15735 406 aa17.3■□□□□ 0.36
HERC2-202ENST00000562136 NLGN2Q8NFZ4 835 aa17.3■□□□□ 0.36
HERC2-202ENST00000562136 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
HERC2-202ENST00000562136 IFNL2Q8IZJ0 200 aa17.29■□□□□ 0.36
HERC2-202ENST00000562136 GPR162Q16538 588 aa17.28■□□□□ 0.36
HERC2-202ENST00000562136 PANK3Q9H999 370 aa17.28■□□□□ 0.36
HERC2-202ENST00000562136 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.36
HERC2-202ENST00000562136 SIK1P57059 783 aa17.27■□□□□ 0.36
HERC2-202ENST00000562136 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.36
HERC2-202ENST00000562136 KDRP35968 1356 aa17.26■□□□□ 0.35
HERC2-202ENST00000562136 COL5A3P25940 1745 aaPredicted RBP17.25■□□□□ 0.35
HERC2-202ENST00000562136 SSFA2P28290 1259 aa17.25■□□□□ 0.35
HERC2-202ENST00000562136 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
HERC2-202ENST00000562136 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
HERC2-202ENST00000562136 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
HERC2-202ENST00000562136 ERVV-2B6SEH9 535 aa17.24■□□□□ 0.35
HERC2-202ENST00000562136 MSH5O43196 834 aa17.24■□□□□ 0.35
HERC2-202ENST00000562136 YBX3P16989 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
HERC2-202ENST00000562136 AK7Q96M32 723 aa17.24■□□□□ 0.35
HERC2-202ENST00000562136 ATG3Q9NT62 314 aa17.24■□□□□ 0.35
HERC2-202ENST00000562136 GRIN3BO60391 1043 aa17.23■□□□□ 0.35
HERC2-202ENST00000562136 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
HERC2-202ENST00000562136 ITPK1Q13572 414 aa17.23■□□□□ 0.35
HERC2-202ENST00000562136 MSL1Q68DK7 614 aa17.23■□□□□ 0.35
HERC2-202ENST00000562136 KIF13BQ9NQT8 1826 aa17.23■□□□□ 0.35
HERC2-202ENST00000562136 CICQ96RK0 1608 aaPredicted RBP17.22■□□□□ 0.35
HERC2-202ENST00000562136 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.22■□□□□ 0.35
HERC2-202ENST00000562136 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms