RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 EDC4Q6P2E9 1401 aaKnown RBP28.67■■■□□ 2.18
PDXDC1-207ENST00000562119 HDGFL2Q7Z4V5 671 aaPredicted RBP28.66■■■□□ 2.18
PDXDC1-207ENST00000562119 LY75O60449 1722 aa28.63■■■□□ 2.17
PDXDC1-207ENST00000562119 GRIN3BO60391 1043 aa28.63■■■□□ 2.17
PDXDC1-207ENST00000562119 A0A1W2PP64 1363 aa28.62■■■□□ 2.17
PDXDC1-207ENST00000562119 COL23A1Q86Y22 540 aaPredicted RBP28.62■■■□□ 2.17
PDXDC1-207ENST00000562119 DOT1LQ8TEK3 1739 aa28.62■■■□□ 2.17
PDXDC1-207ENST00000562119 NEUROD1Q13562 356 aa28.61■■■□□ 2.17
PDXDC1-207ENST00000562119 CCNL1Q9UK58 526 aaPredicted RBP28.61■■■□□ 2.17
PDXDC1-207ENST00000562119 FAM208AQ9UK61 1670 aaKnown RBP28.59■■■□□ 2.17
PDXDC1-207ENST00000562119 MSH5O43196 834 aa28.59■■■□□ 2.17
PDXDC1-207ENST00000562119 MSL1Q68DK7 614 aa28.58■■■□□ 2.17
PDXDC1-207ENST00000562119 ZCRB1Q8TBF4 217 aaKnown RBP28.58■■■□□ 2.17
PDXDC1-207ENST00000562119 TERF2IPQ9NYB0 399 aa28.58■■■□□ 2.17
PDXDC1-207ENST00000562119 ATP10DQ9P241 1426 aa28.58■■■□□ 2.17
PDXDC1-207ENST00000562119 MEGF6O75095 1541 aa28.56■■■□□ 2.16
PDXDC1-207ENST00000562119 FBLN1P23142 703 aa28.56■■■□□ 2.16
PDXDC1-207ENST00000562119 MAP3K19Q56UN5 1328 aa28.56■■■□□ 2.16
PDXDC1-207ENST00000562119 HOXC9P31274 260 aa28.55■■■□□ 2.16
PDXDC1-207ENST00000562119 CARD11Q9BXL7 1154 aa28.54■■■□□ 2.16
PDXDC1-207ENST00000562119 USP47Q96K76 1375 aa28.52■■■□□ 2.16
PDXDC1-207ENST00000562119 AMPHP49418 695 aa28.49■■■□□ 2.15
PDXDC1-207ENST00000562119 CD2APQ9Y5K6 639 aa28.49■■■□□ 2.15
PDXDC1-207ENST00000562119 RGPD2P0DJD1 1756 aa28.49■■■□□ 2.15
PDXDC1-207ENST00000562119 COG3Q96JB2 828 aa28.48■■■□□ 2.15
PDXDC1-207ENST00000562119 GPBP1L1Q9HC44 474 aaPredicted RBP28.48■■■□□ 2.15
PDXDC1-207ENST00000562119 ADCY9O60503 1353 aa28.48■■■□□ 2.15
PDXDC1-207ENST00000562119 NBPF6Q5VWK0 638 aa28.47■■■□□ 2.15
PDXDC1-207ENST00000562119 NBPF4Q96M43 638 aa28.47■■■□□ 2.15
PDXDC1-207ENST00000562119 PUS7Q96PZ0 661 aaKnown RBP28.47■■■□□ 2.15
PDXDC1-207ENST00000562119 USHBP1Q8N6Y0 703 aa28.45■■■□□ 2.14
PDXDC1-207ENST00000562119 ZNF526Q8TF50 670 aaPredicted RBP28.44■■■□□ 2.14
PDXDC1-207ENST00000562119 C5P01031 1676 aa28.43■■■□□ 2.14
PDXDC1-207ENST00000562119 HSPA6P17066 643 aa28.43■■■□□ 2.14
PDXDC1-207ENST00000562119 RRS1Q15050 365 aaKnown RBP28.41■■■□□ 2.14
PDXDC1-207ENST00000562119 AMIGO3Q86WK7 504 aa28.41■■■□□ 2.14
PDXDC1-207ENST00000562119 CGNL1Q0VF96 1302 aa28.41■■■□□ 2.14
PDXDC1-207ENST00000562119 RTL1A6NKG5 1358 aa28.4■■■□□ 2.14
PDXDC1-207ENST00000562119 PALLDQ8WX93 1383 aa28.4■■■□□ 2.14
PDXDC1-207ENST00000562119 FLAD1Q8NFF5 587 aa28.4■■■□□ 2.14
PDXDC1-207ENST00000562119 RAPGEF4Q8WZA2 1011 aa28.38■■■□□ 2.13
PDXDC1-207ENST00000562119 TESK2Q96S53 571 aa28.37■■■□□ 2.13
PDXDC1-207ENST00000562119 WWC3Q9ULE0 1092 aa28.37■■■□□ 2.13
PDXDC1-207ENST00000562119 MPRIPQ6WCQ1 1025 aa28.36■■■□□ 2.13
PDXDC1-207ENST00000562119 SMIM5Q71RC9 77 aa28.36■■■□□ 2.13
PDXDC1-207ENST00000562119 TAF1LQ8IZX4 1826 aa28.35■■■□□ 2.13
PDXDC1-207ENST00000562119 IGSF1Q8N6C5 1336 aa28.35■■■□□ 2.13
PDXDC1-207ENST00000562119 TATP17735 454 aaPredicted RBP28.34■■■□□ 2.13
PDXDC1-207ENST00000562119 PCDH11XQ9BZA7 1347 aa28.34■■■□□ 2.13
PDXDC1-207ENST00000562119 PCDH11YQ9BZA8 1340 aa28.34■■■□□ 2.13
PDXDC1-207ENST00000562119 C4BP0C0L5 1744 aa28.33■■■□□ 2.13
PDXDC1-207ENST00000562119 TOGARAM1Q9Y4F4 1720 aa28.33■■■□□ 2.13
PDXDC1-207ENST00000562119 CYP27B1O15528 508 aa28.32■■■□□ 2.12
PDXDC1-207ENST00000562119 FYB1O15117 783 aa28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 PHF14O94880 888 aa28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 HMGB2P26583 209 aaKnown RBP28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 HSP90AB2PQ58FF8 381 aa28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 AK7Q96M32 723 aa28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 GGNBP2Q9H3C7 697 aa28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 SMG6Q86US8 1419 aaKnown RBP28.31■■■□□ 2.12
PDXDC1-207ENST00000562119 ST20-MTHFSA0A0A6YYL1 179 aa28.29■■■□□ 2.12
PDXDC1-207ENST00000562119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.29■■■□□ 2.12
PDXDC1-207ENST00000562119 KIF3CO14782 793 aa28.29■■■□□ 2.12
PDXDC1-207ENST00000562119 INSRP06213 1382 aa28.27■■■□□ 2.12
PDXDC1-207ENST00000562119 SMARCC1Q92922 1105 aaPredicted RBP28.27■■■□□ 2.12
PDXDC1-207ENST00000562119 PIGBQ92521 554 aa28.26■■■□□ 2.11
PDXDC1-207ENST00000562119 UBR3Q6ZT12 1888 aa28.25■■■□□ 2.11
PDXDC1-207ENST00000562119 LINC00116Q8NCU8 138 aa28.23■■■□□ 2.11
PDXDC1-207ENST00000562119 NSD3Q9BZ95 1437 aa28.23■■■□□ 2.11
PDXDC1-207ENST00000562119 SSFA2P28290 1259 aa28.22■■■□□ 2.11
PDXDC1-207ENST00000562119 ITGB4P16144 1822 aa28.22■■■□□ 2.11
PDXDC1-207ENST00000562119 FLT4P35916 1363 aa28.22■■■□□ 2.11
PDXDC1-207ENST00000562119 LOC102724428A0A0B4J2F2 783 aa28.2■■■□□ 2.1
PDXDC1-207ENST00000562119 SIK1P57059 783 aa28.2■■■□□ 2.1
PDXDC1-207ENST00000562119 TONSLQ96HA7 1378 aa28.2■■■□□ 2.1
PDXDC1-207ENST00000562119 CICQ96RK0 1608 aaPredicted RBP28.19■■■□□ 2.1
PDXDC1-207ENST00000562119 NKX1-1Q15270 411 aaPredicted RBP28.19■■■□□ 2.1
PDXDC1-207ENST00000562119 MAP2P11137 1827 aaKnown RBP28.19■■■□□ 2.1
PDXDC1-207ENST00000562119 PKD1L3Q7Z443 1732 aa28.18■■■□□ 2.1
PDXDC1-207ENST00000562119 KIF24Q5T7B8 1368 aa28.17■■■□□ 2.1
PDXDC1-207ENST00000562119 ITPK1Q13572 414 aa28.17■■■□□ 2.1
PDXDC1-207ENST00000562119 GNPATO15228 680 aa28.16■■■□□ 2.1
PDXDC1-207ENST00000562119 APLP1P51693 650 aa28.16■■■□□ 2.1
PDXDC1-207ENST00000562119 PXDNLA1KZ92 1463 aa28.15■■■□□ 2.1
PDXDC1-207ENST00000562119 SLC24A1O60721 1099 aa28.15■■■□□ 2.1
PDXDC1-207ENST00000562119 DNAJC5GQ8N7S2 189 aa28.15■■■□□ 2.1
PDXDC1-207ENST00000562119 MMP10P09238 476 aa28.14■■■□□ 2.1
PDXDC1-207ENST00000562119 ASAP1Q9ULH1 1129 aa28.14■■■□□ 2.1
PDXDC1-207ENST00000562119 EMILIN1Q9Y6C2 1016 aa28.14■■■□□ 2.1
PDXDC1-207ENST00000562119 NCAPD2Q15021 1401 aa28.14■■■□□ 2.1
PDXDC1-207ENST00000562119 TOMM70O94826 608 aa28.11■■■□□ 2.09
PDXDC1-207ENST00000562119 TMOD3Q9NYL9 352 aa28.11■■■□□ 2.09
PDXDC1-207ENST00000562119 SPG7Q9UQ90 795 aa28.11■■■□□ 2.09
PDXDC1-207ENST00000562119 KIAA1551Q9HCM1 1747 aa28.1■■■□□ 2.09
PDXDC1-207ENST00000562119 ATP6V1AP38606 617 aa28.1■■■□□ 2.09
PDXDC1-207ENST00000562119 BCS1LQ9Y276 419 aa28.09■■■□□ 2.09
PDXDC1-207ENST00000562119 KIF20BQ96Q89 1820 aa28.08■■■□□ 2.09
PDXDC1-207ENST00000562119 A0A0G2JLW4 131 aa28.08■■■□□ 2.09
PDXDC1-207ENST00000562119 TMF1P82094 1093 aa28.08■■■□□ 2.09
PDXDC1-207ENST00000562119 KIF13BQ9NQT8 1826 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms