RNA–Protein interactions for RNA: ENST00000562117.1

GGA2-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-202ENST00000562117 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
GGA2-202ENST00000562117 QTRT2Q9H974 415 aaKnown RBP17.33■□□□□ 0.36
GGA2-202ENST00000562117 HTATSF1O43719 755 aaKnown RBP17.32■□□□□ 0.36
GGA2-202ENST00000562117 RIPK4P57078 832 aa17.32■□□□□ 0.36
GGA2-202ENST00000562117 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
GGA2-202ENST00000562117 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
GGA2-202ENST00000562117 GJD4Q96KN9 370 aaPredicted RBP17.32■□□□□ 0.36
GGA2-202ENST00000562117 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
GGA2-202ENST00000562117 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
GGA2-202ENST00000562117 ZCRB1Q8TBF4 217 aaKnown RBP17.31■□□□□ 0.36
GGA2-202ENST00000562117 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
GGA2-202ENST00000562117 EXOC5O00471 708 aa17.3■□□□□ 0.36
GGA2-202ENST00000562117 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
GGA2-202ENST00000562117 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
GGA2-202ENST00000562117 AKAP4Q5JQC9 854 aa17.29■□□□□ 0.36
GGA2-202ENST00000562117 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
GGA2-202ENST00000562117 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
GGA2-202ENST00000562117 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
GGA2-202ENST00000562117 ONECUT3O60422 494 aaPredicted RBP17.28■□□□□ 0.36
GGA2-202ENST00000562117 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
GGA2-202ENST00000562117 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
GGA2-202ENST00000562117 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
GGA2-202ENST00000562117 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
GGA2-202ENST00000562117 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
GGA2-202ENST00000562117 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
GGA2-202ENST00000562117 WWC1Q8IX03 1113 aa17.27■□□□□ 0.36
GGA2-202ENST00000562117 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
GGA2-202ENST00000562117 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
GGA2-202ENST00000562117 OVOS2A0A0G2JMS6 1433 aa17.27■□□□□ 0.35
GGA2-202ENST00000562117 ATRNO75882 1429 aa17.27■□□□□ 0.35
GGA2-202ENST00000562117 RGPD2P0DJD1 1756 aa17.27■□□□□ 0.35
GGA2-202ENST00000562117 NRAPQ86VF7 1730 aa17.27■□□□□ 0.35
GGA2-202ENST00000562117 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
GGA2-202ENST00000562117 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
GGA2-202ENST00000562117 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.26■□□□□ 0.35
GGA2-202ENST00000562117 DISP2A7MBM2 1401 aa17.25■□□□□ 0.35
GGA2-202ENST00000562117 DDB1Q16531 1140 aa17.25■□□□□ 0.35
GGA2-202ENST00000562117 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
GGA2-202ENST00000562117 MEGF6O75095 1541 aa17.25■□□□□ 0.35
GGA2-202ENST00000562117 PCDH11XQ9BZA7 1347 aa17.24■□□□□ 0.35
GGA2-202ENST00000562117 PCDH11YQ9BZA8 1340 aa17.24■□□□□ 0.35
GGA2-202ENST00000562117 PHKG2P15735 406 aa17.24■□□□□ 0.35
GGA2-202ENST00000562117 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
GGA2-202ENST00000562117 ZNF521Q96K83 1311 aa17.23■□□□□ 0.35
GGA2-202ENST00000562117 CYP27B1O15528 508 aa17.23■□□□□ 0.35
GGA2-202ENST00000562117 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
GGA2-202ENST00000562117 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
GGA2-202ENST00000562117 DCAF5Q96JK2 942 aa17.23■□□□□ 0.35
GGA2-202ENST00000562117 MAP3K5Q99683 1374 aa17.23■□□□□ 0.35
GGA2-202ENST00000562117 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
GGA2-202ENST00000562117 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
GGA2-202ENST00000562117 IL16Q14005 1332 aa17.21■□□□□ 0.35
GGA2-202ENST00000562117 IL17REQ8NFR9 667 aa17.21■□□□□ 0.35
GGA2-202ENST00000562117 RXRBP28702 533 aa17.2■□□□□ 0.34
GGA2-202ENST00000562117 A0A0G2JS52 829 aa17.19■□□□□ 0.34
GGA2-202ENST00000562117 RNMTO43148 476 aaKnown RBP17.19■□□□□ 0.34
GGA2-202ENST00000562117 MYT1Q01538 1121 aa17.19■□□□□ 0.34
GGA2-202ENST00000562117 MCM10Q7L590 875 aa17.19■□□□□ 0.34
GGA2-202ENST00000562117 RGS17Q9UGC6 210 aaPredicted RBP17.19■□□□□ 0.34
GGA2-202ENST00000562117 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
GGA2-202ENST00000562117 E9PSI1 815 aa17.18■□□□□ 0.34
GGA2-202ENST00000562117 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
GGA2-202ENST00000562117 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
GGA2-202ENST00000562117 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
GGA2-202ENST00000562117 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
GGA2-202ENST00000562117 BABAM1Q9NWV8 329 aa17.18■□□□□ 0.34
GGA2-202ENST00000562117 ERVV-2B6SEH9 535 aa17.17■□□□□ 0.34
GGA2-202ENST00000562117 GNAI1P63096 354 aa17.17■□□□□ 0.34
GGA2-202ENST00000562117 TEFQ10587 303 aa17.17■□□□□ 0.34
GGA2-202ENST00000562117 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
GGA2-202ENST00000562117 MYH16Q9H6N6 1097 aa17.17■□□□□ 0.34
GGA2-202ENST00000562117 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
GGA2-202ENST00000562117 TNS2Q63HR2 1409 aa17.16■□□□□ 0.34
GGA2-202ENST00000562117 SLFN5Q08AF3 891 aa17.16■□□□□ 0.34
GGA2-202ENST00000562117 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
GGA2-202ENST00000562117 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
GGA2-202ENST00000562117 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
GGA2-202ENST00000562117 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
GGA2-202ENST00000562117 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
GGA2-202ENST00000562117 GLI3P10071 1580 aa17.15■□□□□ 0.34
GGA2-202ENST00000562117 CHL1O00533 1208 aa17.14■□□□□ 0.33
GGA2-202ENST00000562117 ZNF853P0CG23 659 aa17.14■□□□□ 0.33
GGA2-202ENST00000562117 POTEAQ6S8J7 498 aa17.14■□□□□ 0.33
GGA2-202ENST00000562117 TRMT2AQ8IZ69 625 aaKnown RBP17.14■□□□□ 0.33
GGA2-202ENST00000562117 CABP4P57796 275 aa17.13■□□□□ 0.33
GGA2-202ENST00000562117 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
GGA2-202ENST00000562117 SLC52A2Q9HAB3 445 aa17.13■□□□□ 0.33
GGA2-202ENST00000562117 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
GGA2-202ENST00000562117 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
GGA2-202ENST00000562117 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
GGA2-202ENST00000562117 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
GGA2-202ENST00000562117 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
GGA2-202ENST00000562117 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
GGA2-202ENST00000562117 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
GGA2-202ENST00000562117 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
GGA2-202ENST00000562117 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
GGA2-202ENST00000562117 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
GGA2-202ENST00000562117 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
GGA2-202ENST00000562117 BCL9O00512 1426 aa17.08■□□□□ 0.32
GGA2-202ENST00000562117 FAM196AQ6ZSG2 479 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms