RNA–Protein interactions for RNA: ENST00000562011.1

CTU2-203, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-203ENST00000562011 NBPF6Q5VWK0 638 aa20.09■□□□□ 0.81
CTU2-203ENST00000562011 NBPF4Q96M43 638 aa20.09■□□□□ 0.81
CTU2-203ENST00000562011 LY75O60449 1722 aa20.08■□□□□ 0.81
CTU2-203ENST00000562011 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
CTU2-203ENST00000562011 ZCRB1Q8TBF4 217 aaKnown RBP20.08■□□□□ 0.81
CTU2-203ENST00000562011 ARXQ96QS3 562 aa20.08■□□□□ 0.81
CTU2-203ENST00000562011 USP47Q96K76 1375 aa20.08■□□□□ 0.8
CTU2-203ENST00000562011 KIF20BQ96Q89 1820 aa20.07■□□□□ 0.8
CTU2-203ENST00000562011 PNPLA7Q6ZV29 1317 aa20.06■□□□□ 0.8
CTU2-203ENST00000562011 UTRNP46939 3433 aa20.06■□□□□ 0.8
CTU2-203ENST00000562011 TMF1P82094 1093 aa20.05■□□□□ 0.8
CTU2-203ENST00000562011 SLC27A3Q5K4L6 730 aa20.05■□□□□ 0.8
CTU2-203ENST00000562011 RTL1A6NKG5 1358 aa20.05■□□□□ 0.8
CTU2-203ENST00000562011 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
CTU2-203ENST00000562011 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
CTU2-203ENST00000562011 HSP90AB2PQ58FF8 381 aa20.03■□□□□ 0.8
CTU2-203ENST00000562011 TFCP2L1Q9NZI6 479 aa20.02■□□□□ 0.8
CTU2-203ENST00000562011 CHD4Q14839 1912 aa20.02■□□□□ 0.79
CTU2-203ENST00000562011 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
CTU2-203ENST00000562011 MAP3K5Q99683 1374 aa20■□□□□ 0.79
CTU2-203ENST00000562011 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
CTU2-203ENST00000562011 KLHL34Q8N239 644 aa20■□□□□ 0.79
CTU2-203ENST00000562011 ZNF784Q8NCA9 323 aaPredicted RBP20■□□□□ 0.79
CTU2-203ENST00000562011 INSRP06213 1382 aa19.99■□□□□ 0.79
CTU2-203ENST00000562011 SLC16A10Q8TF71 515 aa19.99■□□□□ 0.79
CTU2-203ENST00000562011 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
CTU2-203ENST00000562011 CCNL1Q9UK58 526 aaPredicted RBP19.99■□□□□ 0.79
CTU2-203ENST00000562011 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
CTU2-203ENST00000562011 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
CTU2-203ENST00000562011 TOGARAM1Q9Y4F4 1720 aa19.97■□□□□ 0.79
CTU2-203ENST00000562011 TATP17735 454 aaPredicted RBP19.97■□□□□ 0.79
CTU2-203ENST00000562011 FLT4P35916 1363 aa19.96■□□□□ 0.79
CTU2-203ENST00000562011 NSD3Q9BZ95 1437 aa19.96■□□□□ 0.79
CTU2-203ENST00000562011 NLGN2Q8NFZ4 835 aa19.96■□□□□ 0.79
CTU2-203ENST00000562011 C5P01031 1676 aa19.96■□□□□ 0.79
CTU2-203ENST00000562011 CGNL1Q0VF96 1302 aa19.96■□□□□ 0.79
CTU2-203ENST00000562011 ITGB4P16144 1822 aa19.95■□□□□ 0.78
CTU2-203ENST00000562011 CYP27B1O15528 508 aa19.95■□□□□ 0.78
CTU2-203ENST00000562011 POLD1P28340 1107 aa19.95■□□□□ 0.78
CTU2-203ENST00000562011 COL23A1Q86Y22 540 aaPredicted RBP19.95■□□□□ 0.78
CTU2-203ENST00000562011 TAF1LQ8IZX4 1826 aa19.95■□□□□ 0.78
CTU2-203ENST00000562011 GPR162Q16538 588 aa19.94■□□□□ 0.78
CTU2-203ENST00000562011 MSH5O43196 834 aa19.93■□□□□ 0.78
CTU2-203ENST00000562011 PCDH11XQ9BZA7 1347 aa19.93■□□□□ 0.78
CTU2-203ENST00000562011 PCDH11YQ9BZA8 1340 aa19.93■□□□□ 0.78
CTU2-203ENST00000562011 PKD1L3Q7Z443 1732 aa19.93■□□□□ 0.78
CTU2-203ENST00000562011 CDCA8Q53HL2 280 aa19.92■□□□□ 0.78
CTU2-203ENST00000562011 MSL1Q68DK7 614 aa19.92■□□□□ 0.78
CTU2-203ENST00000562011 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
CTU2-203ENST00000562011 PELP1Q8IZL8 1130 aaKnown RBP19.92■□□□□ 0.78
CTU2-203ENST00000562011 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
CTU2-203ENST00000562011 MAP2P11137 1827 aaKnown RBP19.92■□□□□ 0.78
CTU2-203ENST00000562011 GOLGB1Q14789 3259 aaKnown RBP19.91■□□□□ 0.78
CTU2-203ENST00000562011 PPM1GO15355 546 aaPredicted RBP19.91■□□□□ 0.78
CTU2-203ENST00000562011 KIF24Q5T7B8 1368 aa19.91■□□□□ 0.78
CTU2-203ENST00000562011 PALLDQ8WX93 1383 aa19.9■□□□□ 0.78
CTU2-203ENST00000562011 SMIM5Q71RC9 77 aa19.89■□□□□ 0.77
CTU2-203ENST00000562011 NCAPD2Q15021 1401 aa19.88■□□□□ 0.77
CTU2-203ENST00000562011 AMIGO3Q86WK7 504 aa19.88■□□□□ 0.77
CTU2-203ENST00000562011 C4BP0C0L5 1744 aa19.87■□□□□ 0.77
CTU2-203ENST00000562011 YBX3P16989 372 aaKnown RBP eCLIP19.86■□□□□ 0.775e-7■□□□□ 9.2
CTU2-203ENST00000562011 PIGBQ92521 554 aa19.86■□□□□ 0.77
CTU2-203ENST00000562011 EYA1Q99502 592 aa19.86■□□□□ 0.77
CTU2-203ENST00000562011 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
CTU2-203ENST00000562011 UBR3Q6ZT12 1888 aa19.84■□□□□ 0.77
CTU2-203ENST00000562011 WASHC2AQ641Q2 1341 aa19.84■□□□□ 0.77
CTU2-203ENST00000562011 POLKQ9UBT6 870 aa19.84■□□□□ 0.77
CTU2-203ENST00000562011 TNNT2P45379 298 aaPredicted RBP19.83■□□□□ 0.77
CTU2-203ENST00000562011 NKX1-1Q15270 411 aaPredicted RBP19.83■□□□□ 0.77
CTU2-203ENST00000562011 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
CTU2-203ENST00000562011 SPG7Q9UQ90 795 aa19.81■□□□□ 0.76
CTU2-203ENST00000562011 PHF14O94880 888 aa19.8■□□□□ 0.76
CTU2-203ENST00000562011 SMARCC1Q92922 1105 aaPredicted RBP19.8■□□□□ 0.76
CTU2-203ENST00000562011 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
CTU2-203ENST00000562011 C1QTNF8P60827 252 aa19.79■□□□□ 0.76
CTU2-203ENST00000562011 EIF4A2Q14240 407 aaKnown RBP19.79■□□□□ 0.76
CTU2-203ENST00000562011 LINC00116Q8NCU8 138 aa19.79■□□□□ 0.76
CTU2-203ENST00000562011 AK7Q96M32 723 aa19.79■□□□□ 0.76
CTU2-203ENST00000562011 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
CTU2-203ENST00000562011 PHKG2P15735 406 aa19.78■□□□□ 0.76
CTU2-203ENST00000562011 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
CTU2-203ENST00000562011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.77■□□□□ 0.76
CTU2-203ENST00000562011 LOC102724428A0A0B4J2F2 783 aa19.77■□□□□ 0.76
CTU2-203ENST00000562011 SIK1P57059 783 aa19.77■□□□□ 0.76
CTU2-203ENST00000562011 ITPK1Q13572 414 aa19.77■□□□□ 0.76
CTU2-203ENST00000562011 SENP3-EIF4A1A0A087X0R7 540 aa19.76■□□□□ 0.75
CTU2-203ENST00000562011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.76■□□□□ 0.75
CTU2-203ENST00000562011 TMOD3Q9NYL9 352 aa19.76■□□□□ 0.75
CTU2-203ENST00000562011 HSPA5P11021 654 aaKnown RBP19.75■□□□□ 0.75
CTU2-203ENST00000562011 IFNL2Q8IZJ0 200 aa19.75■□□□□ 0.75
CTU2-203ENST00000562011 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
CTU2-203ENST00000562011 CD2APQ9Y5K6 639 aa19.75■□□□□ 0.75
CTU2-203ENST00000562011 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
CTU2-203ENST00000562011 ATG3Q9NT62 314 aa19.74■□□□□ 0.75
CTU2-203ENST00000562011 PANK3Q9H999 370 aa19.73■□□□□ 0.75
CTU2-203ENST00000562011 ATP6V1AP38606 617 aa19.72■□□□□ 0.75
CTU2-203ENST00000562011 IGSF1Q8N6C5 1336 aa19.72■□□□□ 0.75
CTU2-203ENST00000562011 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
CTU2-203ENST00000562011 GNPATO15228 680 aa19.71■□□□□ 0.75
CTU2-203ENST00000562011 GIGYF1O75420 1035 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms