RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 HSP90AB2PQ58FF8 381 aa32.41■■■□□ 2.78
TMEM170A-202ENST00000561878 RAPGEF4Q8WZA2 1011 aa32.41■■■□□ 2.78
TMEM170A-202ENST00000561878 CASZ1Q86V15 1759 aa32.4■■■□□ 2.78
TMEM170A-202ENST00000561878 USHBP1Q8N6Y0 703 aa32.38■■■□□ 2.77
TMEM170A-202ENST00000561878 DOT1LQ8TEK3 1739 aa32.37■■■□□ 2.77
TMEM170A-202ENST00000561878 ANKRD26Q9UPS8 1709 aa32.37■■■□□ 2.77
TMEM170A-202ENST00000561878 SLC15A2Q16348 729 aa32.37■■■□□ 2.77
TMEM170A-202ENST00000561878 EMILIN1Q9Y6C2 1016 aa32.37■■■□□ 2.77
TMEM170A-202ENST00000561878 TATP17735 454 aaPredicted RBP32.36■■■□□ 2.77
TMEM170A-202ENST00000561878 PPP1R1BQ9UD71 204 aaPredicted RBP32.36■■■□□ 2.77
TMEM170A-202ENST00000561878 SYTL4Q96C24 671 aaPredicted RBP32.34■■■□□ 2.77
TMEM170A-202ENST00000561878 MAP2P11137 1827 aaKnown RBP32.33■■■□□ 2.77
TMEM170A-202ENST00000561878 PPM1GO15355 546 aaPredicted RBP32.33■■■□□ 2.77
TMEM170A-202ENST00000561878 PAPPAQ13219 1627 aa32.33■■■□□ 2.77
TMEM170A-202ENST00000561878 PRIM1P49642 420 aaKnown RBP32.3■■■□□ 2.76
TMEM170A-202ENST00000561878 WASHC2AQ641Q2 1341 aa32.28■■■□□ 2.76
TMEM170A-202ENST00000561878 PCDH11XQ9BZA7 1347 aa32.28■■■□□ 2.76
TMEM170A-202ENST00000561878 PCDH11YQ9BZA8 1340 aa32.28■■■□□ 2.76
TMEM170A-202ENST00000561878 SLC27A3Q5K4L6 730 aa32.28■■■□□ 2.76
TMEM170A-202ENST00000561878 PDGFDQ9GZP0 370 aaPredicted RBP32.27■■■□□ 2.76
TMEM170A-202ENST00000561878 PANK3Q9H999 370 aa32.27■■■□□ 2.76
TMEM170A-202ENST00000561878 ZBTB7AO95365 584 aa32.25■■■□□ 2.75
TMEM170A-202ENST00000561878 NSD2O96028 1365 aa32.24■■■□□ 2.75
TMEM170A-202ENST00000561878 LRRC4BQ9NT99 713 aa32.24■■■□□ 2.75
TMEM170A-202ENST00000561878 POLKQ9UBT6 870 aa32.24■■■□□ 2.75
TMEM170A-202ENST00000561878 NCAPD2Q15021 1401 aa32.24■■■□□ 2.75
TMEM170A-202ENST00000561878 LY75O60449 1722 aa32.23■■■□□ 2.75
TMEM170A-202ENST00000561878 PKD1L3Q7Z443 1732 aa32.23■■■□□ 2.75
TMEM170A-202ENST00000561878 TNNT2P45379 298 aaPredicted RBP32.21■■■□□ 2.75
TMEM170A-202ENST00000561878 MTFR1LQ9H019 292 aa32.21■■■□□ 2.75
TMEM170A-202ENST00000561878 ZNF827Q17R98 1081 aa32.19■■■□□ 2.74
TMEM170A-202ENST00000561878 ATF5Q9Y2D1 282 aaPredicted RBP32.19■■■□□ 2.74
TMEM170A-202ENST00000561878 QSER1Q2KHR3 1735 aa32.17■■■□□ 2.74
TMEM170A-202ENST00000561878 EYA1Q99502 592 aa32.17■■■□□ 2.74
TMEM170A-202ENST00000561878 SPG7Q9UQ90 795 aa32.17■■■□□ 2.74
TMEM170A-202ENST00000561878 AKT1S1Q96B36 256 aa32.16■■■□□ 2.74
TMEM170A-202ENST00000561878 PTGER2P43116 358 aa32.15■■■□□ 2.74
TMEM170A-202ENST00000561878 CYP27B1O15528 508 aa32.14■■■□□ 2.74
TMEM170A-202ENST00000561878 CCNL1Q9UK58 526 aaPredicted RBP32.14■■■□□ 2.74
TMEM170A-202ENST00000561878 DCAF8L1A6NGE4 600 aa32.13■■■□□ 2.73
TMEM170A-202ENST00000561878 KNSTRNQ9Y448 316 aa32.13■■■□□ 2.73
TMEM170A-202ENST00000561878 EIF4A2Q14240 407 aaKnown RBP32.12■■■□□ 2.73
TMEM170A-202ENST00000561878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.12■■■□□ 2.73
TMEM170A-202ENST00000561878 HMGB2P26583 209 aaKnown RBP32.11■■■□□ 2.73
TMEM170A-202ENST00000561878 MORC1Q86VD1 984 aa32.11■■■□□ 2.73
TMEM170A-202ENST00000561878 TOGARAM1Q9Y4F4 1720 aa32.1■■■□□ 2.73
TMEM170A-202ENST00000561878 KCNQ4P56696 695 aa32.1■■■□□ 2.73
TMEM170A-202ENST00000561878 TFCP2L1Q9NZI6 479 aa32.1■■■□□ 2.73
TMEM170A-202ENST00000561878 PLEKHG2Q9H7P9 1386 aa32.09■■■□□ 2.73
TMEM170A-202ENST00000561878 SLC16A10Q8TF71 515 aa32.09■■■□□ 2.73
TMEM170A-202ENST00000561878 ITGB4P16144 1822 aa32.09■■■□□ 2.73
TMEM170A-202ENST00000561878 MPRIPQ6WCQ1 1025 aa32.08■■■□□ 2.73
TMEM170A-202ENST00000561878 TUBGCP6Q96RT7 1819 aa32.07■■■□□ 2.73
TMEM170A-202ENST00000561878 NKX1-1Q15270 411 aaPredicted RBP32.07■■■□□ 2.72
TMEM170A-202ENST00000561878 SGIP1Q9BQI5 828 aa32.07■■■□□ 2.72
TMEM170A-202ENST00000561878 KIF7Q2M1P5 1343 aa32.06■■■□□ 2.72
TMEM170A-202ENST00000561878 PALLDQ8WX93 1383 aa32.06■■■□□ 2.72
TMEM170A-202ENST00000561878 PNPLA7Q6ZV29 1317 aa32.05■■■□□ 2.72
TMEM170A-202ENST00000561878 IGSF1Q8N6C5 1336 aa32.04■■■□□ 2.72
TMEM170A-202ENST00000561878 SMARCC1Q92922 1105 aaPredicted RBP32.04■■■□□ 2.72
TMEM170A-202ENST00000561878 C5P01031 1676 aa32.04■■■□□ 2.72
TMEM170A-202ENST00000561878 IFNL2Q8IZJ0 200 aa32.03■■■□□ 2.72
TMEM170A-202ENST00000561878 ARXQ96QS3 562 aa32.02■■■□□ 2.72
TMEM170A-202ENST00000561878 FHDC1Q9C0D6 1143 aaPredicted RBP32.01■■■□□ 2.71
TMEM170A-202ENST00000561878 PHKG2P15735 406 aa32■■■□□ 2.71
TMEM170A-202ENST00000561878 TAF1LQ8IZX4 1826 aa31.98■■■□□ 2.71
TMEM170A-202ENST00000561878 POLD1P28340 1107 aa31.98■■■□□ 2.71
TMEM170A-202ENST00000561878 SYT17Q9BSW7 474 aa31.98■■■□□ 2.71
TMEM170A-202ENST00000561878 COL24A1Q17RW2 1714 aa31.97■■■□□ 2.71
TMEM170A-202ENST00000561878 AMER1Q5JTC6 1135 aaPredicted RBP31.97■■■□□ 2.71
TMEM170A-202ENST00000561878 PIGBQ92521 554 aa31.97■■■□□ 2.71
TMEM170A-202ENST00000561878 TMOD3Q9NYL9 352 aa31.97■■■□□ 2.71
TMEM170A-202ENST00000561878 MAP3K5Q99683 1374 aa31.94■■■□□ 2.7
TMEM170A-202ENST00000561878 MSH5O43196 834 aa31.94■■■□□ 2.7
TMEM170A-202ENST00000561878 PLEKHO1Q53GL0 409 aaPredicted RBP31.93■■■□□ 2.7
TMEM170A-202ENST00000561878 HSP90AB1P08238 724 aaKnown RBP31.92■■■□□ 2.7
TMEM170A-202ENST00000561878 AMOTQ4VCS5 1084 aa31.92■■■□□ 2.7
TMEM170A-202ENST00000561878 C4BP0C0L5 1744 aa31.92■■■□□ 2.7
TMEM170A-202ENST00000561878 FLAD1Q8NFF5 587 aa31.91■■■□□ 2.7
TMEM170A-202ENST00000561878 COL23A1Q86Y22 540 aaPredicted RBP31.9■■■□□ 2.7
TMEM170A-202ENST00000561878 YY1P25490 414 aa31.89■■■□□ 2.7
TMEM170A-202ENST00000561878 AK7Q96M32 723 aa31.88■■■□□ 2.69
TMEM170A-202ENST00000561878 LOC102724428A0A0B4J2F2 783 aa31.87■■■□□ 2.69
TMEM170A-202ENST00000561878 SIK1P57059 783 aa31.87■■■□□ 2.69
TMEM170A-202ENST00000561878 ZNF530Q6P9A1 599 aaPredicted RBP31.87■■■□□ 2.69
TMEM170A-202ENST00000561878 DCAF5Q96JK2 942 aa31.87■■■□□ 2.69
TMEM170A-202ENST00000561878 ERVV-2B6SEH9 535 aa31.86■■■□□ 2.69
TMEM170A-202ENST00000561878 PER1O15534 1290 aaPredicted RBP31.86■■■□□ 2.69
TMEM170A-202ENST00000561878 IL13P35225 146 aa31.85■■■□□ 2.69
TMEM170A-202ENST00000561878 SULT6B1Q6IMI4 303 aa31.85■■■□□ 2.69
TMEM170A-202ENST00000561878 AEBP1Q8IUX7 1158 aa31.85■■■□□ 2.69
TMEM170A-202ENST00000561878 ASAP1Q9ULH1 1129 aa31.85■■■□□ 2.69
TMEM170A-202ENST00000561878 KDRP35968 1356 aa31.84■■■□□ 2.69
TMEM170A-202ENST00000561878 KLHL34Q8N239 644 aa31.84■■■□□ 2.69
TMEM170A-202ENST00000561878 MTHFSP49914 203 aa31.83■■■□□ 2.69
TMEM170A-202ENST00000561878 C1orf141Q5JVX7 400 aa31.83■■■□□ 2.69
TMEM170A-202ENST00000561878 CC2D1BQ5T0F9 858 aaKnown RBP31.82■■■□□ 2.68
TMEM170A-202ENST00000561878 UBR3Q6ZT12 1888 aa31.82■■■□□ 2.68
TMEM170A-202ENST00000561878 ATG3Q9NT62 314 aa31.81■■■□□ 2.68
TMEM170A-202ENST00000561878 ATP6V1AP38606 617 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms