RNA–Protein interactions for RNA: ENST00000561410.5

AP3S2-215, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-215ENST00000561410 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
AP3S2-215ENST00000561410 RAPGEF4Q8WZA2 1011 aa17.76■□□□□ 0.43
AP3S2-215ENST00000561410 MBIPQ9NS73 344 aa17.76■□□□□ 0.43
AP3S2-215ENST00000561410 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
AP3S2-215ENST00000561410 PIP4K2BP78356 416 aa17.74■□□□□ 0.43
AP3S2-215ENST00000561410 C1orf141Q5JVX7 400 aa17.74■□□□□ 0.43
AP3S2-215ENST00000561410 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
AP3S2-215ENST00000561410 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
AP3S2-215ENST00000561410 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
AP3S2-215ENST00000561410 TATP17735 454 aaPredicted RBP17.73■□□□□ 0.43
AP3S2-215ENST00000561410 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
AP3S2-215ENST00000561410 CRB1P82279 1406 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 COL18A1P39060 1754 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 CAMTA1Q9Y6Y1 1673 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 CHL1O00533 1208 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 EVA1CP58658 441 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 AKAP4Q5JQC9 854 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 CRBNQ96SW2 442 aa17.72■□□□□ 0.43
AP3S2-215ENST00000561410 ALDH1L2Q3SY69 923 aa17.71■□□□□ 0.43
AP3S2-215ENST00000561410 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
AP3S2-215ENST00000561410 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
AP3S2-215ENST00000561410 TSPYL4Q9UJ04 414 aa17.71■□□□□ 0.43
AP3S2-215ENST00000561410 SPG7Q9UQ90 795 aa17.71■□□□□ 0.43
AP3S2-215ENST00000561410 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.42
AP3S2-215ENST00000561410 MS4A1P11836 297 aa17.7■□□□□ 0.42
AP3S2-215ENST00000561410 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
AP3S2-215ENST00000561410 C20orf194Q5TEA3 1177 aa17.7■□□□□ 0.42
AP3S2-215ENST00000561410 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
AP3S2-215ENST00000561410 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
AP3S2-215ENST00000561410 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
AP3S2-215ENST00000561410 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
AP3S2-215ENST00000561410 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
AP3S2-215ENST00000561410 SSH1Q8WYL5 1049 aa17.69■□□□□ 0.42
AP3S2-215ENST00000561410 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
AP3S2-215ENST00000561410 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
AP3S2-215ENST00000561410 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
AP3S2-215ENST00000561410 IPO8O15397 1037 aaKnown RBP17.68■□□□□ 0.42
AP3S2-215ENST00000561410 ZKSCAN2Q63HK3 967 aa17.68■□□□□ 0.42
AP3S2-215ENST00000561410 B4GALNT3Q6L9W6 998 aa17.68■□□□□ 0.42
AP3S2-215ENST00000561410 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
AP3S2-215ENST00000561410 RGPD5Q99666 1765 aa17.68■□□□□ 0.42
AP3S2-215ENST00000561410 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
AP3S2-215ENST00000561410 ELL2O00472 640 aaPredicted RBP17.67■□□□□ 0.42
AP3S2-215ENST00000561410 VAMP4O75379 141 aa17.67■□□□□ 0.42
AP3S2-215ENST00000561410 TAF7Q15545 349 aaPredicted RBP17.67■□□□□ 0.42
AP3S2-215ENST00000561410 C8orf58Q8NAV2 365 aa17.67■□□□□ 0.42
AP3S2-215ENST00000561410 STRN4Q9NRL3 753 aa17.67■□□□□ 0.42
AP3S2-215ENST00000561410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.42
AP3S2-215ENST00000561410 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
AP3S2-215ENST00000561410 TEFQ10587 303 aa17.66■□□□□ 0.42
AP3S2-215ENST00000561410 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
AP3S2-215ENST00000561410 COL22A1Q8NFW1 1626 aaPredicted RBP17.65■□□□□ 0.42
AP3S2-215ENST00000561410 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
AP3S2-215ENST00000561410 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
AP3S2-215ENST00000561410 MIS18AQ9NYP9 233 aa17.65■□□□□ 0.42
AP3S2-215ENST00000561410 MPRIPQ6WCQ1 1025 aa17.64■□□□□ 0.41
AP3S2-215ENST00000561410 CARD10Q9BWT7 1032 aa17.64■□□□□ 0.41
AP3S2-215ENST00000561410 LRRC37A3O60309 1634 aa17.64■□□□□ 0.41
AP3S2-215ENST00000561410 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
AP3S2-215ENST00000561410 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.41
AP3S2-215ENST00000561410 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
AP3S2-215ENST00000561410 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
AP3S2-215ENST00000561410 BTG4Q9NY30 223 aa17.63■□□□□ 0.41
AP3S2-215ENST00000561410 NOB1Q9ULX3 412 aaKnown RBP17.63■□□□□ 0.41
AP3S2-215ENST00000561410 MEGF6O75095 1541 aa17.62■□□□□ 0.41
AP3S2-215ENST00000561410 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
AP3S2-215ENST00000561410 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
AP3S2-215ENST00000561410 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
AP3S2-215ENST00000561410 LARP1Q6PKG0 1096 aaKnown RBP17.62■□□□□ 0.41
AP3S2-215ENST00000561410 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
AP3S2-215ENST00000561410 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
AP3S2-215ENST00000561410 IFNL2Q8IZJ0 200 aa17.62■□□□□ 0.41
AP3S2-215ENST00000561410 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
AP3S2-215ENST00000561410 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
AP3S2-215ENST00000561410 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
AP3S2-215ENST00000561410 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
AP3S2-215ENST00000561410 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
AP3S2-215ENST00000561410 IL2RBP14784 551 aa17.6■□□□□ 0.41
AP3S2-215ENST00000561410 PHKG2P15735 406 aa17.6■□□□□ 0.41
AP3S2-215ENST00000561410 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
AP3S2-215ENST00000561410 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
AP3S2-215ENST00000561410 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
AP3S2-215ENST00000561410 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
AP3S2-215ENST00000561410 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
AP3S2-215ENST00000561410 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
AP3S2-215ENST00000561410 AAMPQ13685 434 aa17.59■□□□□ 0.41
AP3S2-215ENST00000561410 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
AP3S2-215ENST00000561410 ZCRB1Q8TBF4 217 aaKnown RBP17.59■□□□□ 0.41
AP3S2-215ENST00000561410 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
AP3S2-215ENST00000561410 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
AP3S2-215ENST00000561410 TRIM27P14373 513 aa17.58■□□□□ 0.4
AP3S2-215ENST00000561410 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
AP3S2-215ENST00000561410 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.4
AP3S2-215ENST00000561410 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
AP3S2-215ENST00000561410 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
AP3S2-215ENST00000561410 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
AP3S2-215ENST00000561410 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
AP3S2-215ENST00000561410 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms