RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	SOX12	O15370	315 aa		10.5	□□□□□ -0.73
ZEB1-223	ENST00000561304	SLC12A5	Q9H2X9	1139 aa		10.5	□□□□□ -0.73
ZEB1-223	ENST00000561304	AXIN2	Q9Y2T1	843 aa		10.5	□□□□□ -0.73
ZEB1-223	ENST00000561304	ST20-MTHFS	A0A0A6YYL1	179 aa		10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	ATN1	P54259	1190 aa	Predicted RBP	10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	EVA1C	P58658	441 aa		10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	LCE2D	Q5TA82	110 aa	Predicted RBP	10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	NME9	Q86XW9	330 aa		10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.49	□□□□□ -0.73	3e-6	■■■■□ 22.7
ZEB1-223	ENST00000561304	OVOS2	A0A0J9YW53	1432 aa		10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	OVOS2	Q6IE36	1432 aa		10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	EDC4	Q6P2E9	1401 aa	Known RBP	10.49	□□□□□ -0.73
ZEB1-223	ENST00000561304	FAM208A	Q9UK61	1670 aa	Known RBP	10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	USP31	Q70CQ4	1352 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	USP47	Q96K76	1375 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	DISP2	A7MBM2	1401 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	BARGIN	Q6ZT62	677 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	ARHGEF25	Q86VW2	580 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	TCP11L2	Q8N4U5	519 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	TMC1	Q8TDI8	760 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	TMEM106C	Q9BVX2	250 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	RGPD4	Q7Z3J3	1758 aa		10.48	□□□□□ -0.73
ZEB1-223	ENST00000561304	ECM2	O94769	699 aa	Predicted RBP	10.47	□□□□□ -0.73
ZEB1-223	ENST00000561304	PDAP1	Q13442	181 aa	Known RBP	10.47	□□□□□ -0.73
ZEB1-223	ENST00000561304	SHANK3	Q9BYB0	1731 aa		10.47	□□□□□ -0.73
ZEB1-223	ENST00000561304	LRP5	O75197	1615 aa		10.46	□□□□□ -0.73
ZEB1-223	ENST00000561304	RIOK3	O14730	519 aa	Known RBP	10.46	□□□□□ -0.74
ZEB1-223	ENST00000561304	PELP1	Q8IZL8	1130 aa	Known RBP	10.46	□□□□□ -0.74
ZEB1-223	ENST00000561304	SLC39A7	Q92504	469 aa		10.46	□□□□□ -0.74
ZEB1-223	ENST00000561304	C7	P10643	843 aa		10.45	□□□□□ -0.74
ZEB1-223	ENST00000561304	SF3B2	Q13435	895 aa	Known RBP	10.45	□□□□□ -0.74
ZEB1-223	ENST00000561304	PCGF6	Q9BYE7	350 aa		10.45	□□□□□ -0.74
ZEB1-223	ENST00000561304	WDR17	Q8IZU2	1322 aa		10.45	□□□□□ -0.74
ZEB1-223	ENST00000561304	TRIM37	O94972	964 aa		10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	PSEN1	P49768	467 aa		10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	EN1	Q05925	392 aa	Predicted RBP	10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	KCNH5	Q8NCM2	988 aa		10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	THRAP3	Q9Y2W1	955 aa	Known RBP	10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	NHS	Q6T4R5	1651 aa		10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	NINL	Q9Y2I6	1382 aa		10.44	□□□□□ -0.74
ZEB1-223	ENST00000561304	BAG6	P46379	1132 aa		10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	TOM1L2	Q6ZVM7	507 aa		10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	RNF25	Q96BH1	459 aa	Predicted RBP	10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	PUS7	Q96PZ0	661 aa	Known RBP	10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	TRIM35	Q9UPQ4	493 aa		10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	ANKRD26	Q9UPS8	1709 aa		10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	ANKRD36B	Q8N2N9	1353 aa		10.43	□□□□□ -0.74
ZEB1-223	ENST00000561304	EZH2	Q15910	746 aa	Known RBP	10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	IER5L	Q5T953	404 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	FAM196A	Q6ZSG2	479 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	TERF2IP	Q9NYB0	399 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	TAOK2	Q9UL54	1235 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	OVOS2	A0A0G2JMS6	1433 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	BTAF1	O14981	1849 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	KAT6B	Q8WYB5	2073 aa		10.42	□□□□□ -0.74
ZEB1-223	ENST00000561304	PDE3B	Q13370	1112 aa		10.41	□□□□□ -0.74
ZEB1-223	ENST00000561304	ERBB3	P21860	1342 aa		10.41	□□□□□ -0.74
ZEB1-223	ENST00000561304	TNS2	Q63HR2	1409 aa		10.41	□□□□□ -0.74
ZEB1-223	ENST00000561304	MAP2	P11137	1827 aa	Known RBP	10.41	□□□□□ -0.74
ZEB1-223	ENST00000561304	PSD	A5PKW4	1024 aa	Predicted RBP	10.4	□□□□□ -0.74
ZEB1-223	ENST00000561304	FBLN1	P23142	703 aa		10.4	□□□□□ -0.74
ZEB1-223	ENST00000561304	DOT1L	Q8TEK3	1739 aa		10.4	□□□□□ -0.74
ZEB1-223	ENST00000561304	CAMKK2	Q96RR4	588 aa		10.4	□□□□□ -0.74
ZEB1-223	ENST00000561304	CLSPN	Q9HAW4	1339 aa		10.4	□□□□□ -0.74
ZEB1-223	ENST00000561304	METRN	Q9UJH8	293 aa		10.4	□□□□□ -0.74
ZEB1-223	ENST00000561304	CSB-PGBD3	P0DP91	1061 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	PTF1A	Q7RTS3	328 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	MARCH10	Q8NA82	808 aa	Predicted RBP	10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	CARD10	Q9BWT7	1032 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	CASZ1	Q86V15	1759 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	CCDC7	Q96M83	1385 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	APBA3	O96018	575 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	TMF1	P82094	1093 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	DDB1	Q16531	1140 aa		10.39	□□□□□ -0.75
ZEB1-223	ENST00000561304	POTEJ	P0CG39	1038 aa		10.38	□□□□□ -0.75
ZEB1-223	ENST00000561304	ANKRD24	Q8TF21	1146 aa		10.38	□□□□□ -0.75
ZEB1-223	ENST00000561304	BCL9	O00512	1426 aa		10.37	□□□□□ -0.75
ZEB1-223	ENST00000561304	PARD3	Q8TEW0	1356 aa		10.37	□□□□□ -0.75
ZEB1-223	ENST00000561304	MAP3K19	Q56UN5	1328 aa		10.37	□□□□□ -0.75
ZEB1-223	ENST00000561304	TIMELESS	Q9UNS1	1208 aa		10.37	□□□□□ -0.75
ZEB1-223	ENST00000561304	TUBGCP6	Q96RT7	1819 aa		10.37	□□□□□ -0.75
ZEB1-223	ENST00000561304	NSD3	Q9BZ95	1437 aa		10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	PAPPA	Q13219	1627 aa		10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	FYB1	O15117	783 aa		10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	R3HDM1	Q15032	1099 aa	Known RBP	10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	COG3	Q96JB2	828 aa		10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	GGNBP2	Q9H3C7	697 aa		10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	NLRP2	Q9NX02	1062 aa		10.36	□□□□□ -0.75
ZEB1-223	ENST00000561304	MEGF6	O75095	1541 aa		10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	RGL2	O15211	777 aa		10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	SLC24A1	O60721	1099 aa		10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	GOLGA2	Q08379	1002 aa		10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	RRS1	Q15050	365 aa	Known RBP	10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	IP6K1	Q92551	441 aa		10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	CARD14	Q9BXL6	1004 aa		10.35	□□□□□ -0.75
ZEB1-223	ENST00000561304	LY75	O60449	1722 aa		10.34	□□□□□ -0.75
ZEB1-223	ENST00000561304	PKD1L3	Q7Z443	1732 aa		10.34	□□□□□ -0.75

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