RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PTGER2P43116 358 aa37.66■■■■□ 3.62
SNRPA1-215ENST00000561187 ZCRB1Q8TBF4 217 aaKnown RBP37.66■■■■□ 3.62
SNRPA1-215ENST00000561187 CARD14Q9BXL6 1004 aa37.66■■■■□ 3.62
SNRPA1-215ENST00000561187 PRIM1P49642 420 aaKnown RBP37.65■■■■□ 3.62
SNRPA1-215ENST00000561187 HSP90AB2PQ58FF8 381 aa37.65■■■■□ 3.62
SNRPA1-215ENST00000561187 POLR3GLQ9BT43 218 aa37.65■■■■□ 3.62
SNRPA1-215ENST00000561187 KCNQ4P56696 695 aa37.64■■■■□ 3.62
SNRPA1-215ENST00000561187 FLT4P35916 1363 aa37.6■■■■□ 3.61
SNRPA1-215ENST00000561187 MTFR1LQ9H019 292 aa37.6■■■■□ 3.61
SNRPA1-215ENST00000561187 EMILIN1Q9Y6C2 1016 aa37.6■■■■□ 3.61
SNRPA1-215ENST00000561187 NSD2O96028 1365 aa37.59■■■■□ 3.61
SNRPA1-215ENST00000561187 RAPGEF4Q8WZA2 1011 aa37.59■■■■□ 3.61
SNRPA1-215ENST00000561187 INSRP06213 1382 aa37.58■■■■□ 3.61
SNRPA1-215ENST00000561187 DCAF8L1A6NGE4 600 aa37.56■■■■□ 3.6
SNRPA1-215ENST00000561187 PPM1GO15355 546 aaPredicted RBP37.56■■■■□ 3.6
SNRPA1-215ENST00000561187 YY1P25490 414 aa37.56■■■■□ 3.6
SNRPA1-215ENST00000561187 TIMELESSQ9UNS1 1208 aa37.56■■■■□ 3.6
SNRPA1-215ENST00000561187 TATP17735 454 aaPredicted RBP37.54■■■■□ 3.6
SNRPA1-215ENST00000561187 FHDC1Q9C0D6 1143 aaPredicted RBP37.54■■■■□ 3.6
SNRPA1-215ENST00000561187 SLC27A3Q5K4L6 730 aa37.52■■■■□ 3.6
SNRPA1-215ENST00000561187 CLSPNQ9HAW4 1339 aa37.52■■■■□ 3.6
SNRPA1-215ENST00000561187 AKT1S1Q96B36 256 aa37.51■■■■□ 3.6
SNRPA1-215ENST00000561187 TUBGCP6Q96RT7 1819 aa37.5■■■■□ 3.59
SNRPA1-215ENST00000561187 SGIP1Q9BQI5 828 aa37.5■■■■□ 3.59
SNRPA1-215ENST00000561187 LY75O60449 1722 aa37.5■■■■□ 3.59
SNRPA1-215ENST00000561187 CGNL1Q0VF96 1302 aa37.48■■■■□ 3.59
SNRPA1-215ENST00000561187 KIF24Q5T7B8 1368 aa37.47■■■■□ 3.59
SNRPA1-215ENST00000561187 PCDH11XQ9BZA7 1347 aa37.46■■■■□ 3.59
SNRPA1-215ENST00000561187 PCDH11YQ9BZA8 1340 aa37.46■■■■□ 3.59
SNRPA1-215ENST00000561187 SYT17Q9BSW7 474 aa37.46■■■■□ 3.59
SNRPA1-215ENST00000561187 TFCP2L1Q9NZI6 479 aa37.46■■■■□ 3.59
SNRPA1-215ENST00000561187 CCNL1Q9UK58 526 aaPredicted RBP37.46■■■■□ 3.59
SNRPA1-215ENST00000561187 PNPLA7Q6ZV29 1317 aa37.45■■■■□ 3.59
SNRPA1-215ENST00000561187 ARXQ96QS3 562 aa37.44■■■■□ 3.58
SNRPA1-215ENST00000561187 UTRNP46939 3433 aa37.43■■■■□ 3.58
SNRPA1-215ENST00000561187 ANKRD26Q9UPS8 1709 aa37.43■■■■□ 3.58
SNRPA1-215ENST00000561187 QSER1Q2KHR3 1735 aa37.42■■■■□ 3.58
SNRPA1-215ENST00000561187 TNNT2P45379 298 aaPredicted RBP37.42■■■■□ 3.58
SNRPA1-215ENST00000561187 KLHL34Q8N239 644 aa37.42■■■■□ 3.58
SNRPA1-215ENST00000561187 MAP2P11137 1827 aaKnown RBP37.4■■■■□ 3.58
SNRPA1-215ENST00000561187 HSPA5P11021 654 aaKnown RBP37.4■■■■□ 3.58
SNRPA1-215ENST00000561187 CCER1Q8TC90 406 aaPredicted RBP37.4■■■■□ 3.58
SNRPA1-215ENST00000561187 TOGARAM1Q9Y4F4 1720 aa37.39■■■■□ 3.58
SNRPA1-215ENST00000561187 CYP27B1O15528 508 aa37.39■■■■□ 3.58
SNRPA1-215ENST00000561187 PKD1L3Q7Z443 1732 aa37.37■■■■□ 3.57
SNRPA1-215ENST00000561187 MPRIPQ6WCQ1 1025 aa37.37■■■■□ 3.57
SNRPA1-215ENST00000561187 EIF4G2P78344 907 aaKnown RBP eCLIP37.36■■■■□ 3.57
SNRPA1-215ENST00000561187 MSH5O43196 834 aa37.35■■■■□ 3.57
SNRPA1-215ENST00000561187 PALLDQ8WX93 1383 aa37.33■■■■□ 3.57
SNRPA1-215ENST00000561187 POLKQ9UBT6 870 aa37.33■■■■□ 3.57
SNRPA1-215ENST00000561187 WASHC2AQ641Q2 1341 aa37.33■■■■□ 3.57
SNRPA1-215ENST00000561187 EYA1Q99502 592 aa37.32■■■■□ 3.56
SNRPA1-215ENST00000561187 NCAPD2Q15021 1401 aa37.32■■■■□ 3.56
SNRPA1-215ENST00000561187 C5P01031 1676 aa37.31■■■■□ 3.56
SNRPA1-215ENST00000561187 POLD1P28340 1107 aa37.31■■■■□ 3.56
SNRPA1-215ENST00000561187 ITGB4P16144 1822 aa37.31■■■■□ 3.56
SNRPA1-215ENST00000561187 SLC16A10Q8TF71 515 aa37.3■■■■□ 3.56
SNRPA1-215ENST00000561187 PANK3Q9H999 370 aa37.27■■■■□ 3.56
SNRPA1-215ENST00000561187 MSL1Q68DK7 614 aa37.26■■■■□ 3.56
SNRPA1-215ENST00000561187 COL23A1Q86Y22 540 aaPredicted RBP37.26■■■■□ 3.56
SNRPA1-215ENST00000561187 SPG7Q9UQ90 795 aa37.25■■■■□ 3.55
SNRPA1-215ENST00000561187 MAP3K5Q99683 1374 aa37.25■■■■□ 3.55
SNRPA1-215ENST00000561187 EIF4A2Q14240 407 aaKnown RBP37.24■■■■□ 3.55
SNRPA1-215ENST00000561187 COL24A1Q17RW2 1714 aa37.24■■■■□ 3.55
SNRPA1-215ENST00000561187 TAF1LQ8IZX4 1826 aa37.23■■■■□ 3.55
SNRPA1-215ENST00000561187 PELP1Q8IZL8 1130 aaKnown RBP37.22■■■■□ 3.55
SNRPA1-215ENST00000561187 PIGBQ92521 554 aa37.21■■■■□ 3.55
SNRPA1-215ENST00000561187 GOLGB1Q14789 3259 aaKnown RBP37.19■■■■□ 3.54
SNRPA1-215ENST00000561187 NLGN2Q8NFZ4 835 aa37.18■■■■□ 3.54
SNRPA1-215ENST00000561187 C4BP0C0L5 1744 aa37.17■■■■□ 3.54
SNRPA1-215ENST00000561187 GPR162Q16538 588 aa37.17■■■■□ 3.54
SNRPA1-215ENST00000561187 SMARCC1Q92922 1105 aaPredicted RBP37.16■■■■□ 3.54
SNRPA1-215ENST00000561187 NKX1-1Q15270 411 aaPredicted RBP37.15■■■■□ 3.54
SNRPA1-215ENST00000561187 SMIM5Q71RC9 77 aa37.15■■■■□ 3.54
SNRPA1-215ENST00000561187 PHKG2P15735 406 aa37.14■■■■□ 3.54
SNRPA1-215ENST00000561187 AK7Q96M32 723 aa37.14■■■■□ 3.54
SNRPA1-215ENST00000561187 TMOD3Q9NYL9 352 aa37.14■■■■□ 3.54
SNRPA1-215ENST00000561187 PHF14O94880 888 aa37.13■■■■□ 3.53
SNRPA1-215ENST00000561187 AMIGO3Q86WK7 504 aa37.12■■■■□ 3.53
SNRPA1-215ENST00000561187 IFNL2Q8IZJ0 200 aa37.12■■■■□ 3.53
SNRPA1-215ENST00000561187 CHD4Q14839 1912 aa37.11■■■■□ 3.53
SNRPA1-215ENST00000561187 MORC1Q86VD1 984 aa37.1■■■■□ 3.53
SNRPA1-215ENST00000561187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.1■■■■□ 3.53
SNRPA1-215ENST00000561187 IGSF1Q8N6C5 1336 aa37.1■■■■□ 3.53
SNRPA1-215ENST00000561187 ZNF784Q8NCA9 323 aaPredicted RBP37.09■■■■□ 3.53
SNRPA1-215ENST00000561187 ASAP1Q9ULH1 1129 aa37.09■■■■□ 3.53
SNRPA1-215ENST00000561187 LOC102724428A0A0B4J2F2 783 aa37.07■■■■□ 3.52
SNRPA1-215ENST00000561187 SIK1P57059 783 aa37.07■■■■□ 3.52
SNRPA1-215ENST00000561187 LINC00116Q8NCU8 138 aa37.07■■■■□ 3.52
SNRPA1-215ENST00000561187 UBR3Q6ZT12 1888 aa37.05■■■■□ 3.52
SNRPA1-215ENST00000561187 AEBP1Q8IUX7 1158 aa37.03■■■■□ 3.52
SNRPA1-215ENST00000561187 FLAD1Q8NFF5 587 aa37.03■■■■□ 3.52
SNRPA1-215ENST00000561187 ITPK1Q13572 414 aa37.02■■■■□ 3.52
SNRPA1-215ENST00000561187 KNSTRNQ9Y448 316 aa37.02■■■■□ 3.52
SNRPA1-215ENST00000561187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.01■■■■□ 3.52
SNRPA1-215ENST00000561187 ATP6V1AP38606 617 aa37■■■■□ 3.51
SNRPA1-215ENST00000561187 ZNF530Q6P9A1 599 aaPredicted RBP36.99■■■■□ 3.51
SNRPA1-215ENST00000561187 ATG3Q9NT62 314 aa36.99■■■■□ 3.51
SNRPA1-215ENST00000561187 GNPATO15228 680 aa36.97■■■■□ 3.51
SNRPA1-215ENST00000561187 YBX3P16989 372 aaKnown RBP eCLIP36.97■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms