RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
PSME1-208ENST00000561059 HSP90AB2PQ58FF8 381 aa18.7■□□□□ 0.58
PSME1-208ENST00000561059 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
PSME1-208ENST00000561059 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
PSME1-208ENST00000561059 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
PSME1-208ENST00000561059 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
PSME1-208ENST00000561059 NSD2O96028 1365 aa18.68■□□□□ 0.58
PSME1-208ENST00000561059 AKT1S1Q96B36 256 aa18.68■□□□□ 0.58
PSME1-208ENST00000561059 SYT17Q9BSW7 474 aa18.68■□□□□ 0.58
PSME1-208ENST00000561059 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
PSME1-208ENST00000561059 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
PSME1-208ENST00000561059 ARXQ96QS3 562 aa18.67■□□□□ 0.58
PSME1-208ENST00000561059 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
PSME1-208ENST00000561059 EMILIN1Q9Y6C2 1016 aa18.67■□□□□ 0.58
PSME1-208ENST00000561059 SHANK3Q9BYB0 1731 aa18.66■□□□□ 0.58
PSME1-208ENST00000561059 SLC27A3Q5K4L6 730 aa18.66■□□□□ 0.58
PSME1-208ENST00000561059 KLHL34Q8N239 644 aa18.66■□□□□ 0.58
PSME1-208ENST00000561059 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
PSME1-208ENST00000561059 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
PSME1-208ENST00000561059 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
PSME1-208ENST00000561059 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
PSME1-208ENST00000561059 PNPLA7Q6ZV29 1317 aa18.65■□□□□ 0.58
PSME1-208ENST00000561059 TATP17735 454 aaPredicted RBP18.64■□□□□ 0.57
PSME1-208ENST00000561059 TFCP2L1Q9NZI6 479 aa18.64■□□□□ 0.57
PSME1-208ENST00000561059 KIF20BQ96Q89 1820 aa18.63■□□□□ 0.57
PSME1-208ENST00000561059 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
PSME1-208ENST00000561059 INSRP06213 1382 aa18.63■□□□□ 0.57
PSME1-208ENST00000561059 FLT4P35916 1363 aa18.63■□□□□ 0.57
PSME1-208ENST00000561059 GOLGB1Q14789 3259 aaKnown RBP18.62■□□□□ 0.57
PSME1-208ENST00000561059 MSH5O43196 834 aa18.6■□□□□ 0.57
PSME1-208ENST00000561059 CYP27B1O15528 508 aa18.59■□□□□ 0.57
PSME1-208ENST00000561059 MPRIPQ6WCQ1 1025 aa18.59■□□□□ 0.57
PSME1-208ENST00000561059 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
PSME1-208ENST00000561059 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.57
PSME1-208ENST00000561059 PCDH11XQ9BZA7 1347 aa18.58■□□□□ 0.57
PSME1-208ENST00000561059 PCDH11YQ9BZA8 1340 aa18.58■□□□□ 0.57
PSME1-208ENST00000561059 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
PSME1-208ENST00000561059 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
PSME1-208ENST00000561059 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
PSME1-208ENST00000561059 LY75O60449 1722 aa18.57■□□□□ 0.56
PSME1-208ENST00000561059 POLD1P28340 1107 aa18.56■□□□□ 0.56
PSME1-208ENST00000561059 COL23A1Q86Y22 540 aaPredicted RBP18.56■□□□□ 0.56
PSME1-208ENST00000561059 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
PSME1-208ENST00000561059 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
PSME1-208ENST00000561059 NLGN2Q8NFZ4 835 aa18.55■□□□□ 0.56
PSME1-208ENST00000561059 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
PSME1-208ENST00000561059 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
PSME1-208ENST00000561059 GPR162Q16538 588 aa18.54■□□□□ 0.56
PSME1-208ENST00000561059 EYA1Q99502 592 aa18.54■□□□□ 0.56
PSME1-208ENST00000561059 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
PSME1-208ENST00000561059 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
PSME1-208ENST00000561059 TIMELESSQ9UNS1 1208 aa18.53■□□□□ 0.56
PSME1-208ENST00000561059 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
PSME1-208ENST00000561059 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
PSME1-208ENST00000561059 PIGBQ92521 554 aa18.52■□□□□ 0.56
PSME1-208ENST00000561059 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.55
PSME1-208ENST00000561059 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
PSME1-208ENST00000561059 HSPA5P11021 654 aaKnown RBP18.51■□□□□ 0.55
PSME1-208ENST00000561059 AMIGO3Q86WK7 504 aa18.51■□□□□ 0.55
PSME1-208ENST00000561059 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
PSME1-208ENST00000561059 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
PSME1-208ENST00000561059 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
PSME1-208ENST00000561059 PHF14O94880 888 aa18.48■□□□□ 0.55
PSME1-208ENST00000561059 PKD1L3Q7Z443 1732 aa18.48■□□□□ 0.55
PSME1-208ENST00000561059 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
PSME1-208ENST00000561059 C5P01031 1676 aa18.47■□□□□ 0.55
PSME1-208ENST00000561059 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■□□□□ 10.3
PSME1-208ENST00000561059 PANK3Q9H999 370 aa18.47■□□□□ 0.55
PSME1-208ENST00000561059 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
PSME1-208ENST00000561059 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
PSME1-208ENST00000561059 AK7Q96M32 723 aa18.46■□□□□ 0.55
PSME1-208ENST00000561059 COL24A1Q17RW2 1714 aa18.46■□□□□ 0.55
PSME1-208ENST00000561059 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
PSME1-208ENST00000561059 PHKG2P15735 406 aa18.45■□□□□ 0.54
PSME1-208ENST00000561059 YBX3P16989 372 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■□ 20.7
PSME1-208ENST00000561059 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
PSME1-208ENST00000561059 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
PSME1-208ENST00000561059 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
PSME1-208ENST00000561059 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
PSME1-208ENST00000561059 ITGB4P16144 1822 aa18.44■□□□□ 0.54
PSME1-208ENST00000561059 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
PSME1-208ENST00000561059 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
PSME1-208ENST00000561059 SIK1P57059 783 aa18.43■□□□□ 0.54
PSME1-208ENST00000561059 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
PSME1-208ENST00000561059 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
PSME1-208ENST00000561059 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
PSME1-208ENST00000561059 ITPK1Q13572 414 aa18.42■□□□□ 0.54
PSME1-208ENST00000561059 IFNL2Q8IZJ0 200 aa18.42■□□□□ 0.54
PSME1-208ENST00000561059 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
PSME1-208ENST00000561059 AEBP1Q8IUX7 1158 aa18.4■□□□□ 0.54
PSME1-208ENST00000561059 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
PSME1-208ENST00000561059 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
PSME1-208ENST00000561059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.4■□□□□ 0.541e-9■□□□□ 11.2
PSME1-208ENST00000561059 GNPATO15228 680 aa18.39■□□□□ 0.53
PSME1-208ENST00000561059 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
PSME1-208ENST00000561059 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
PSME1-208ENST00000561059 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
PSME1-208ENST00000561059 CHD4Q14839 1912 aa18.38■□□□□ 0.53
PSME1-208ENST00000561059 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
PSME1-208ENST00000561059 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms