RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 RYDENQ9NUL5 291 aaKnown RBP10.46□□□□□ -0.73
GABPB1-211ENST00000561010 USP35Q9P2H5 1018 aa10.46□□□□□ -0.73
GABPB1-211ENST00000561010 NUP188Q5SRE5 1749 aa10.46□□□□□ -0.74
GABPB1-211ENST00000561010 LTN1O94822 1766 aa10.45□□□□□ -0.74
GABPB1-211ENST00000561010 PARP4Q9UKK3 1724 aaKnown RBP10.45□□□□□ -0.74
GABPB1-211ENST00000561010 RREB1Q92766 1687 aa10.45□□□□□ -0.74
GABPB1-211ENST00000561010 CENPJQ9HC77 1338 aaPredicted RBP10.45□□□□□ -0.74
GABPB1-211ENST00000561010 PSDA5PKW4 1024 aaPredicted RBP10.45□□□□□ -0.74
GABPB1-211ENST00000561010 SRPK2P78362 688 aaKnown RBP10.45□□□□□ -0.74
GABPB1-211ENST00000561010 SF3B2Q13435 895 aaKnown RBP10.45□□□□□ -0.74
GABPB1-211ENST00000561010 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
GABPB1-211ENST00000561010 MON2Q7Z3U7 1717 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 LRP5O75197 1615 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 SPATA31A1Q5TZJ5 1347 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
GABPB1-211ENST00000561010 MMRN1Q13201 1228 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
GABPB1-211ENST00000561010 SSH2Q76I76 1423 aa10.43□□□□□ -0.74
GABPB1-211ENST00000561010 POTEB3A0JP26 581 aa10.43□□□□□ -0.74
GABPB1-211ENST00000561010 PLEKHG3A1L390 1219 aa10.43□□□□□ -0.74
GABPB1-211ENST00000561010 POTEBQ6S5H4 581 aa10.43□□□□□ -0.74
GABPB1-211ENST00000561010 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
GABPB1-211ENST00000561010 LRRC37A3O60309 1634 aa10.43□□□□□ -0.74
GABPB1-211ENST00000561010 USP19O94966 1318 aa10.42□□□□□ -0.74
GABPB1-211ENST00000561010 LARP1Q6PKG0 1096 aaKnown RBP10.42□□□□□ -0.74
GABPB1-211ENST00000561010 CABP1Q9NZU7 370 aa10.42□□□□□ -0.74
GABPB1-211ENST00000561010 USP6P35125 1406 aa10.41□□□□□ -0.74
GABPB1-211ENST00000561010 PEAK1Q9H792 1746 aa10.41□□□□□ -0.74
GABPB1-211ENST00000561010 TRIM37O94972 964 aa10.41□□□□□ -0.74
GABPB1-211ENST00000561010 BAG6P46379 1132 aa10.41□□□□□ -0.74
GABPB1-211ENST00000561010 EVA1CP58658 441 aa10.41□□□□□ -0.74
GABPB1-211ENST00000561010 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
GABPB1-211ENST00000561010 SLIT3O75094 1523 aa10.41□□□□□ -0.74
GABPB1-211ENST00000561010 RGPD2P0DJD1 1756 aa10.4□□□□□ -0.74
GABPB1-211ENST00000561010 SOX12O15370 315 aa10.4□□□□□ -0.74
GABPB1-211ENST00000561010 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-211ENST00000561010 EZH2Q15910 746 aaKnown RBP10.4□□□□□ -0.74
GABPB1-211ENST00000561010 COL5A2P05997 1499 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-211ENST00000561010 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
GABPB1-211ENST00000561010 GCP02774 474 aa10.39□□□□□ -0.75
GABPB1-211ENST00000561010 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-211ENST00000561010 CPDO75976 1380 aa10.39□□□□□ -0.75
GABPB1-211ENST00000561010 NLRP6P59044 892 aa10.38□□□□□ -0.75
GABPB1-211ENST00000561010 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
GABPB1-211ENST00000561010 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
GABPB1-211ENST00000561010 R3HDM1Q15032 1099 aaKnown RBP10.37□□□□□ -0.75
GABPB1-211ENST00000561010 USP54Q70EL1 1684 aa10.37□□□□□ -0.75
GABPB1-211ENST00000561010 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
GABPB1-211ENST00000561010 DISP2A7MBM2 1401 aa10.36□□□□□ -0.75
GABPB1-211ENST00000561010 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
GABPB1-211ENST00000561010 TCP11L2Q8N4U5 519 aa10.36□□□□□ -0.75
GABPB1-211ENST00000561010 NFAT5O94916 1531 aa10.36□□□□□ -0.75
GABPB1-211ENST00000561010 CRB1P82279 1406 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 APBA3O96018 575 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 FAM196AQ6ZSG2 479 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 CAMKK2Q96RR4 588 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
GABPB1-211ENST00000561010 RGPD3A6NKT7 1758 aaPredicted RBP10.34□□□□□ -0.75
GABPB1-211ENST00000561010 RGPD4Q7Z3J3 1758 aa10.34□□□□□ -0.75
GABPB1-211ENST00000561010 CPSF1Q10570 1443 aaKnown RBP10.34□□□□□ -0.75
GABPB1-211ENST00000561010 PTF1AQ7RTS3 328 aa10.34□□□□□ -0.75
GABPB1-211ENST00000561010 TTC21BQ7Z4L5 1316 aa10.33□□□□□ -0.76
GABPB1-211ENST00000561010 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.33□□□□□ -0.76
GABPB1-211ENST00000561010 AATKQ6ZMQ8 1374 aa10.33□□□□□ -0.76
GABPB1-211ENST00000561010 KTN1Q86UP2 1357 aaKnown RBP10.33□□□□□ -0.76
GABPB1-211ENST00000561010 CD163L1Q9NR16 1453 aa10.33□□□□□ -0.76
GABPB1-211ENST00000561010 BTAF1O14981 1849 aa10.33□□□□□ -0.76
GABPB1-211ENST00000561010 BRD4O60885 1362 aaPredicted RBP10.32□□□□□ -0.76
GABPB1-211ENST00000561010 TOM1L2Q6ZVM7 507 aa10.32□□□□□ -0.76
GABPB1-211ENST00000561010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.32□□□□□ -0.76
GABPB1-211ENST00000561010 FBXO22Q8NEZ5 403 aa10.32□□□□□ -0.76
GABPB1-211ENST00000561010 CASZ1Q86V15 1759 aa10.31□□□□□ -0.76
GABPB1-211ENST00000561010 ARHGEF25Q86VW2 580 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 NME9Q86XW9 330 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 CARD11Q9BXL7 1154 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.76
GABPB1-211ENST00000561010 THRAP3Q9Y2W1 955 aaKnown RBP10.3□□□□□ -0.76
GABPB1-211ENST00000561010 NHSQ6T4R5 1651 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 OVOS2A0A0G2JMS6 1433 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 OVOS2A0A0J9YW53 1432 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 OVOS2Q6IE36 1432 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 KIF20BQ96Q89 1820 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 WDR17Q8IZU2 1322 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
GABPB1-211ENST00000561010 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
GABPB1-211ENST00000561010 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
GABPB1-211ENST00000561010 TMC1Q8TDI8 760 aa10.29□□□□□ -0.76
GABPB1-211ENST00000561010 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
GABPB1-211ENST00000561010 DDB1Q16531 1140 aa10.28□□□□□ -0.76
GABPB1-211ENST00000561010 MARCH10Q8NA82 808 aaPredicted RBP10.28□□□□□ -0.76
GABPB1-211ENST00000561010 SLC12A5Q9H2X9 1139 aa10.28□□□□□ -0.76
GABPB1-211ENST00000561010 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
GABPB1-211ENST00000561010 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1532.5 ms