RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 KIF24Q5T7B8 1368 aa17.62■□□□□ 0.41
CSHL1-209ENST00000560999 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
CSHL1-209ENST00000560999 RRS1Q15050 365 aaKnown RBP17.61■□□□□ 0.41
CSHL1-209ENST00000560999 OVOS2A0A0G2JMS6 1433 aa17.61■□□□□ 0.41
CSHL1-209ENST00000560999 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
CSHL1-209ENST00000560999 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
CSHL1-209ENST00000560999 ADAMTS8Q9UP79 889 aa17.6■□□□□ 0.41
CSHL1-209ENST00000560999 MAP3K19Q56UN5 1328 aa17.59■□□□□ 0.41
CSHL1-209ENST00000560999 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
CSHL1-209ENST00000560999 DDB1Q16531 1140 aa17.59■□□□□ 0.41
CSHL1-209ENST00000560999 PPM1GO15355 546 aaPredicted RBP17.58■□□□□ 0.41
CSHL1-209ENST00000560999 ABCC6O95255 1503 aa17.58■□□□□ 0.4
CSHL1-209ENST00000560999 RTL1A6NKG5 1358 aa17.58■□□□□ 0.4
CSHL1-209ENST00000560999 FLT4P35916 1363 aa17.58■□□□□ 0.4
CSHL1-209ENST00000560999 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
CSHL1-209ENST00000560999 CARD10Q9BWT7 1032 aa17.57■□□□□ 0.4
CSHL1-209ENST00000560999 PPP4R2Q9NY27 417 aa17.56■□□□□ 0.4
CSHL1-209ENST00000560999 ERBB3P21860 1342 aa17.55■□□□□ 0.4
CSHL1-209ENST00000560999 IL13P35225 146 aa17.54■□□□□ 0.4
CSHL1-209ENST00000560999 AMPHP49418 695 aa17.54■□□□□ 0.4
CSHL1-209ENST00000560999 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
CSHL1-209ENST00000560999 NLRP2Q9NX02 1062 aa17.53■□□□□ 0.4
CSHL1-209ENST00000560999 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
CSHL1-209ENST00000560999 HOXC9P31274 260 aa17.52■□□□□ 0.4
CSHL1-209ENST00000560999 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
CSHL1-209ENST00000560999 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
CSHL1-209ENST00000560999 U2SURPO15042 1029 aaKnown RBP17.51■□□□□ 0.39
CSHL1-209ENST00000560999 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
CSHL1-209ENST00000560999 IP6K1Q92551 441 aa17.51■□□□□ 0.39
CSHL1-209ENST00000560999 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
CSHL1-209ENST00000560999 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
CSHL1-209ENST00000560999 EIF4A2Q14240 407 aaKnown RBP17.5■□□□□ 0.39
CSHL1-209ENST00000560999 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
CSHL1-209ENST00000560999 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-209ENST00000560999 CDCA7Q9BWT1 371 aaPredicted RBP17.5■□□□□ 0.39
CSHL1-209ENST00000560999 PNNQ9H307 717 aaKnown RBP17.5■□□□□ 0.39
CSHL1-209ENST00000560999 RGPD2P0DJD1 1756 aa17.49■□□□□ 0.39
CSHL1-209ENST00000560999 EXOC5O00471 708 aa17.48■□□□□ 0.39
CSHL1-209ENST00000560999 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
CSHL1-209ENST00000560999 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
CSHL1-209ENST00000560999 KCNQ2O43526 872 aa17.47■□□□□ 0.39
CSHL1-209ENST00000560999 FCHSD2O94868 740 aa17.47■□□□□ 0.39
CSHL1-209ENST00000560999 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
CSHL1-209ENST00000560999 ACSBG1Q96GR2 724 aa17.47■□□□□ 0.39
CSHL1-209ENST00000560999 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
CSHL1-209ENST00000560999 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
CSHL1-209ENST00000560999 BCL9O00512 1426 aa17.46■□□□□ 0.39
CSHL1-209ENST00000560999 PLEKHF1Q96S99 279 aa17.46■□□□□ 0.39
CSHL1-209ENST00000560999 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
CSHL1-209ENST00000560999 IL2RBP14784 551 aa17.45■□□□□ 0.38
CSHL1-209ENST00000560999 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
CSHL1-209ENST00000560999 PROM2Q8N271 834 aa17.45■□□□□ 0.38
CSHL1-209ENST00000560999 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
CSHL1-209ENST00000560999 IGSF1Q8N6C5 1336 aa17.44■□□□□ 0.38
CSHL1-209ENST00000560999 APAF1O14727 1248 aa17.43■□□□□ 0.38
CSHL1-209ENST00000560999 PLSCR1O15162 318 aa17.43■□□□□ 0.38
CSHL1-209ENST00000560999 PDGFDQ9GZP0 370 aaPredicted RBP17.43■□□□□ 0.38
CSHL1-209ENST00000560999 BTAF1O14981 1849 aa17.43■□□□□ 0.38
CSHL1-209ENST00000560999 KDRP35968 1356 aa17.42■□□□□ 0.38
CSHL1-209ENST00000560999 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
CSHL1-209ENST00000560999 RCAN3Q9UKA8 241 aa17.42■□□□□ 0.38
CSHL1-209ENST00000560999 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
CSHL1-209ENST00000560999 SHANK3Q9BYB0 1731 aa17.42■□□□□ 0.38
CSHL1-209ENST00000560999 NEFMP07197 916 aa17.41■□□□□ 0.38
CSHL1-209ENST00000560999 HMOX1P09601 288 aa17.41■□□□□ 0.38
CSHL1-209ENST00000560999 EYA1Q99502 592 aa17.41■□□□□ 0.38
CSHL1-209ENST00000560999 ZNF521Q96K83 1311 aa17.41■□□□□ 0.38
CSHL1-209ENST00000560999 MEGF6O75095 1541 aa17.4■□□□□ 0.38
CSHL1-209ENST00000560999 PRKAR2BP31323 418 aa17.4■□□□□ 0.38
CSHL1-209ENST00000560999 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
CSHL1-209ENST00000560999 TXNRD1Q16881 649 aa17.39■□□□□ 0.38
CSHL1-209ENST00000560999 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.38
CSHL1-209ENST00000560999 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
CSHL1-209ENST00000560999 NCAPD2Q15021 1401 aa17.39■□□□□ 0.37
CSHL1-209ENST00000560999 DDX54Q8TDD1 881 aaKnown RBP17.39■□□□□ 0.37
CSHL1-209ENST00000560999 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
CSHL1-209ENST00000560999 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
CSHL1-209ENST00000560999 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
CSHL1-209ENST00000560999 AEBP1Q8IUX7 1158 aa17.38■□□□□ 0.37
CSHL1-209ENST00000560999 TSHZ2Q9NRE2 1034 aa17.38■□□□□ 0.37
CSHL1-209ENST00000560999 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
CSHL1-209ENST00000560999 PAPPAQ13219 1627 aa17.37■□□□□ 0.37
CSHL1-209ENST00000560999 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
CSHL1-209ENST00000560999 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
CSHL1-209ENST00000560999 KAT6BQ8WYB5 2073 aa17.36■□□□□ 0.37
CSHL1-209ENST00000560999 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
CSHL1-209ENST00000560999 PHACTR3Q96KR7 559 aa17.35■□□□□ 0.37
CSHL1-209ENST00000560999 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
CSHL1-209ENST00000560999 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
CSHL1-209ENST00000560999 ZBTB7AO95365 584 aa17.34■□□□□ 0.37
CSHL1-209ENST00000560999 NFE2L2Q16236 605 aa17.34■□□□□ 0.37
CSHL1-209ENST00000560999 SPON1Q9HCB6 807 aa17.34■□□□□ 0.37
CSHL1-209ENST00000560999 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.37
CSHL1-209ENST00000560999 E9PSI1 815 aa17.32■□□□□ 0.36
CSHL1-209ENST00000560999 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-209ENST00000560999 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
CSHL1-209ENST00000560999 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
CSHL1-209ENST00000560999 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
CSHL1-209ENST00000560999 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
CSHL1-209ENST00000560999 SLC15A2Q16348 729 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms