RNA–Protein interactions for RNA: ENST00000560910.5

TM2D3-213, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-213ENST00000560910 POLKQ9UBT6 870 aa23.23■■□□□ 1.31
TM2D3-213ENST00000560910 TNNT2P45379 298 aaPredicted RBP23.22■■□□□ 1.31
TM2D3-213ENST00000560910 KIF7Q2M1P5 1343 aa23.22■■□□□ 1.31
TM2D3-213ENST00000560910 WASHC2AQ641Q2 1341 aa23.22■■□□□ 1.31
TM2D3-213ENST00000560910 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
TM2D3-213ENST00000560910 TXNRD1Q16881 649 aa23.21■■□□□ 1.31
TM2D3-213ENST00000560910 NSD2O96028 1365 aa23.21■■□□□ 1.31
TM2D3-213ENST00000560910 TATP17735 454 aaPredicted RBP23.2■■□□□ 1.3
TM2D3-213ENST00000560910 SHANK3Q9BYB0 1731 aa23.18■■□□□ 1.3
TM2D3-213ENST00000560910 NCAPD2Q15021 1401 aa23.17■■□□□ 1.3
TM2D3-213ENST00000560910 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
TM2D3-213ENST00000560910 BTAF1O14981 1849 aa23.15■■□□□ 1.3
TM2D3-213ENST00000560910 PRIM1P49642 420 aaKnown RBP23.15■■□□□ 1.3
TM2D3-213ENST00000560910 SYTL4Q96C24 671 aaPredicted RBP23.15■■□□□ 1.3
TM2D3-213ENST00000560910 MORC1Q86VD1 984 aa23.14■■□□□ 1.29
TM2D3-213ENST00000560910 EYA1Q99502 592 aa23.14■■□□□ 1.29
TM2D3-213ENST00000560910 MAP2P11137 1827 aaKnown RBP23.14■■□□□ 1.29
TM2D3-213ENST00000560910 PCDH11XQ9BZA7 1347 aa23.13■■□□□ 1.29
TM2D3-213ENST00000560910 PCDH11YQ9BZA8 1340 aa23.13■■□□□ 1.29
TM2D3-213ENST00000560910 EIF4A2Q14240 407 aaKnown RBP23.13■■□□□ 1.29
TM2D3-213ENST00000560910 AMER1Q5JTC6 1135 aaPredicted RBP23.12■■□□□ 1.29
TM2D3-213ENST00000560910 DOT1LQ8TEK3 1739 aa23.12■■□□□ 1.29
TM2D3-213ENST00000560910 STK32BQ9NY57 414 aa23.12■■□□□ 1.29
TM2D3-213ENST00000560910 CYP27B1O15528 508 aa23.1■■□□□ 1.29
TM2D3-213ENST00000560910 SLC15A2Q16348 729 aa23.09■■□□□ 1.29
TM2D3-213ENST00000560910 LRRC4BQ9NT99 713 aa23.09■■□□□ 1.29
TM2D3-213ENST00000560910 PDGFDQ9GZP0 370 aaPredicted RBP23.08■■□□□ 1.29
TM2D3-213ENST00000560910 KAT6BQ8WYB5 2073 aa23.08■■□□□ 1.29
TM2D3-213ENST00000560910 PAPPAQ13219 1627 aa23.08■■□□□ 1.28
TM2D3-213ENST00000560910 SPON1Q9HCB6 807 aa23.07■■□□□ 1.28
TM2D3-213ENST00000560910 IGSF1Q8N6C5 1336 aa23.07■■□□□ 1.28
TM2D3-213ENST00000560910 PKD1L3Q7Z443 1732 aa23.06■■□□□ 1.28
TM2D3-213ENST00000560910 SLC27A3Q5K4L6 730 aa23.06■■□□□ 1.28
TM2D3-213ENST00000560910 SPG7Q9UQ90 795 aa23.06■■□□□ 1.28
TM2D3-213ENST00000560910 CASZ1Q86V15 1759 aa23.05■■□□□ 1.28
TM2D3-213ENST00000560910 PER1O15534 1290 aaPredicted RBP23.05■■□□□ 1.28
TM2D3-213ENST00000560910 ZNF827Q17R98 1081 aa23.04■■□□□ 1.28
TM2D3-213ENST00000560910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.04■■□□□ 1.28
TM2D3-213ENST00000560910 ZBTB7AO95365 584 aa23.02■■□□□ 1.28
TM2D3-213ENST00000560910 KCNQ4P56696 695 aa23.02■■□□□ 1.28
TM2D3-213ENST00000560910 NKX1-1Q15270 411 aaPredicted RBP23.01■■□□□ 1.27
TM2D3-213ENST00000560910 AKT1S1Q96B36 256 aa23■■□□□ 1.27
TM2D3-213ENST00000560910 PLEKHG2Q9H7P9 1386 aa23■■□□□ 1.27
TM2D3-213ENST00000560910 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
TM2D3-213ENST00000560910 MPRIPQ6WCQ1 1025 aa22.99■■□□□ 1.27
TM2D3-213ENST00000560910 PPP1R1BQ9UD71 204 aaPredicted RBP22.99■■□□□ 1.27
TM2D3-213ENST00000560910 CCNL1Q9UK58 526 aaPredicted RBP22.99■■□□□ 1.27
TM2D3-213ENST00000560910 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
TM2D3-213ENST00000560910 PHKG2P15735 406 aa22.98■■□□□ 1.27
TM2D3-213ENST00000560910 LY75O60449 1722 aa22.97■■□□□ 1.27
TM2D3-213ENST00000560910 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
TM2D3-213ENST00000560910 IFNL2Q8IZJ0 200 aa22.97■■□□□ 1.27
TM2D3-213ENST00000560910 IL13P35225 146 aa22.96■■□□□ 1.27
TM2D3-213ENST00000560910 ATF5Q9Y2D1 282 aaPredicted RBP22.96■■□□□ 1.27
TM2D3-213ENST00000560910 PALLDQ8WX93 1383 aa22.96■■□□□ 1.27
TM2D3-213ENST00000560910 NPC1L1Q9UHC9 1359 aa22.96■■□□□ 1.27
TM2D3-213ENST00000560910 PTGER2P43116 358 aa22.95■■□□□ 1.26
TM2D3-213ENST00000560910 MTHFSP49914 203 aa22.95■■□□□ 1.26
TM2D3-213ENST00000560910 PIGBQ92521 554 aa22.95■■□□□ 1.26
TM2D3-213ENST00000560910 MTFR1LQ9H019 292 aa22.95■■□□□ 1.26
TM2D3-213ENST00000560910 PLEKHO1Q53GL0 409 aaPredicted RBP22.93■■□□□ 1.26
TM2D3-213ENST00000560910 SULT6B1Q6IMI4 303 aa22.93■■□□□ 1.26
TM2D3-213ENST00000560910 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
TM2D3-213ENST00000560910 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
TM2D3-213ENST00000560910 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
TM2D3-213ENST00000560910 TFCP2L1Q9NZI6 479 aa22.92■■□□□ 1.26
TM2D3-213ENST00000560910 KDRP35968 1356 aa22.91■■□□□ 1.26
TM2D3-213ENST00000560910 ZNF530Q6P9A1 599 aaPredicted RBP22.91■■□□□ 1.26
TM2D3-213ENST00000560910 TMOD3Q9NYL9 352 aa22.91■■□□□ 1.26
TM2D3-213ENST00000560910 AMOTQ4VCS5 1084 aa22.9■■□□□ 1.26
TM2D3-213ENST00000560910 ITGB4P16144 1822 aa22.89■■□□□ 1.26
TM2D3-213ENST00000560910 SGIP1Q9BQI5 828 aa22.89■■□□□ 1.25
TM2D3-213ENST00000560910 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
TM2D3-213ENST00000560910 QSER1Q2KHR3 1735 aa22.86■■□□□ 1.25
TM2D3-213ENST00000560910 KDM6AO15550 1401 aaPredicted RBP22.86■■□□□ 1.25
TM2D3-213ENST00000560910 SLC16A10Q8TF71 515 aa22.86■■□□□ 1.25
TM2D3-213ENST00000560910 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
TM2D3-213ENST00000560910 ASAP1Q9ULH1 1129 aa22.86■■□□□ 1.25
TM2D3-213ENST00000560910 TUBGCP6Q96RT7 1819 aa22.85■■□□□ 1.25
TM2D3-213ENST00000560910 DIAPH1O60610 1272 aaKnown RBP22.85■■□□□ 1.25
TM2D3-213ENST00000560910 LOC102724428A0A0B4J2F2 783 aa22.84■■□□□ 1.25
TM2D3-213ENST00000560910 ERVV-2B6SEH9 535 aa22.84■■□□□ 1.25
TM2D3-213ENST00000560910 SIK1P57059 783 aa22.84■■□□□ 1.25
TM2D3-213ENST00000560910 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
TM2D3-213ENST00000560910 ATG3Q9NT62 314 aa22.84■■□□□ 1.25
TM2D3-213ENST00000560910 C5P01031 1676 aa22.84■■□□□ 1.25
TM2D3-213ENST00000560910 HMOX1P09601 288 aa22.83■■□□□ 1.25
TM2D3-213ENST00000560910 HMGB2P26583 209 aaKnown RBP22.83■■□□□ 1.25
TM2D3-213ENST00000560910 COL3A1P02461 1466 aaPredicted RBP22.83■■□□□ 1.25
TM2D3-213ENST00000560910 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
TM2D3-213ENST00000560910 ARXQ96QS3 562 aa22.82■■□□□ 1.24
TM2D3-213ENST00000560910 MSH5O43196 834 aa22.81■■□□□ 1.24
TM2D3-213ENST00000560910 FHDC1Q9C0D6 1143 aaPredicted RBP22.81■■□□□ 1.24
TM2D3-213ENST00000560910 CABP4P57796 275 aa22.8■■□□□ 1.24
TM2D3-213ENST00000560910 AK7Q96M32 723 aa22.8■■□□□ 1.24
TM2D3-213ENST00000560910 ITPK1Q13572 414 aa22.79■■□□□ 1.24
TM2D3-213ENST00000560910 LINC00116Q8NCU8 138 aa22.79■■□□□ 1.24
TM2D3-213ENST00000560910 C4BP0C0L5 1744 aa22.79■■□□□ 1.24
TM2D3-213ENST00000560910 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
TM2D3-213ENST00000560910 POLD1P28340 1107 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms