RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 PTPRTO14522 1441 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
TRPM1-212ENST00000560801 ZKSCAN2Q63HK3 967 aa11.98□□□□□ -0.49
TRPM1-212ENST00000560801 LMOD1P29536 600 aaPredicted RBP11.98□□□□□ -0.49
TRPM1-212ENST00000560801 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
TRPM1-212ENST00000560801 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
TRPM1-212ENST00000560801 CARD10Q9BWT7 1032 aa11.98□□□□□ -0.49
TRPM1-212ENST00000560801 SPON1Q9HCB6 807 aa11.98□□□□□ -0.49
TRPM1-212ENST00000560801 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
TRPM1-212ENST00000560801 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
TRPM1-212ENST00000560801 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
TRPM1-212ENST00000560801 PRAG1Q86YV5 1406 aa11.97□□□□□ -0.49
TRPM1-212ENST00000560801 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
TRPM1-212ENST00000560801 IFIT2P09913 472 aaKnown RBP11.97□□□□□ -0.49
TRPM1-212ENST00000560801 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
TRPM1-212ENST00000560801 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
TRPM1-212ENST00000560801 NIP7Q9Y221 180 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRPM1-212ENST00000560801 RCAN3Q9UKA8 241 aa11.97□□□□□ -0.49
TRPM1-212ENST00000560801 EIF4A2Q14240 407 aaKnown RBP11.96□□□□□ -0.49
TRPM1-212ENST00000560801 MADDQ8WXG6 1647 aa11.96□□□□□ -0.49
TRPM1-212ENST00000560801 FAM83GA6ND36 823 aa11.96□□□□□ -0.49
TRPM1-212ENST00000560801 EYA1Q99502 592 aa11.96□□□□□ -0.49
TRPM1-212ENST00000560801 APPP05067 770 aa11.96□□□□□ -0.5
TRPM1-212ENST00000560801 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.5
TRPM1-212ENST00000560801 ZSCAN29Q8IWY8 852 aaPredicted RBP11.96□□□□□ -0.5
TRPM1-212ENST00000560801 H0YIN7 160 aa11.95□□□□□ -0.5
TRPM1-212ENST00000560801 RGS3P49796 1198 aa11.95□□□□□ -0.5
TRPM1-212ENST00000560801 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
TRPM1-212ENST00000560801 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
TRPM1-212ENST00000560801 SRCIN1Q9C0H9 1055 aa11.95□□□□□ -0.5
TRPM1-212ENST00000560801 NYXQ9GZU5 481 aa11.95□□□□□ -0.5
TRPM1-212ENST00000560801 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-212ENST00000560801 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
TRPM1-212ENST00000560801 HSP90AB4PQ58FF6 505 aa11.95□□□□□ -0.5
TRPM1-212ENST00000560801 PRDM15P57071 1507 aaPredicted RBP11.94□□□□□ -0.5
TRPM1-212ENST00000560801 CNBD1Q8NA66 436 aa11.94□□□□□ -0.5
TRPM1-212ENST00000560801 B4GALNT3Q6L9W6 998 aa11.94□□□□□ -0.5
TRPM1-212ENST00000560801 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
TRPM1-212ENST00000560801 KIF16BQ96L93 1317 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 POLKQ9UBT6 870 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 ZBTB7AO95365 584 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 GNAI3P08754 354 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 CDC5LQ99459 802 aaKnown RBP11.93□□□□□ -0.5
TRPM1-212ENST00000560801 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
TRPM1-212ENST00000560801 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
TRPM1-212ENST00000560801 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
TRPM1-212ENST00000560801 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 CHAF1AQ13111 956 aaPredicted RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 VPS72Q15906 364 aa11.92□□□□□ -0.5
TRPM1-212ENST00000560801 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
TRPM1-212ENST00000560801 WWC1Q8IX03 1113 aa11.92□□□□□ -0.5
TRPM1-212ENST00000560801 MYD88Q99836 296 aa11.92□□□□□ -0.5
TRPM1-212ENST00000560801 SUPT16HQ9Y5B9 1047 aaKnown RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
TRPM1-212ENST00000560801 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 BRD4O60885 1362 aaPredicted RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 EXOSC9Q06265 439 aaKnown RBP11.92□□□□□ -0.5
TRPM1-212ENST00000560801 CEP170BQ9Y4F5 1589 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-212ENST00000560801 MCCP23508 829 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 CLTCQ00610 1675 aaKnown RBP11.91□□□□□ -0.5
TRPM1-212ENST00000560801 ARHGEF25Q86VW2 580 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
TRPM1-212ENST00000560801 NF2P35240 595 aa11.91□□□□□ -0.5
TRPM1-212ENST00000560801 TSR2Q969E8 191 aaKnown RBP11.91□□□□□ -0.5
TRPM1-212ENST00000560801 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
TRPM1-212ENST00000560801 CAVIN4Q5BKX8 364 aa11.9□□□□□ -0.5
TRPM1-212ENST00000560801 MYO1BO43795 1136 aa11.9□□□□□ -0.51
TRPM1-212ENST00000560801 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.51
TRPM1-212ENST00000560801 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
TRPM1-212ENST00000560801 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
TRPM1-212ENST00000560801 IFIT5Q13325 482 aaKnown RBP11.89□□□□□ -0.51
TRPM1-212ENST00000560801 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
TRPM1-212ENST00000560801 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
TRPM1-212ENST00000560801 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
TRPM1-212ENST00000560801 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 METTL24Q5JXM2 366 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
TRPM1-212ENST00000560801 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 C1orf167Q5SNV9 1468 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
TRPM1-212ENST00000560801 DEFB132Q7Z7B7 95 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
TRPM1-212ENST00000560801 CDC42BPAQ5VT25 1732 aa11.88□□□□□ -0.51
TRPM1-212ENST00000560801 TNS3Q68CZ2 1445 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 RBM26Q5T8P6 1007 aaKnown RBP11.87□□□□□ -0.51
TRPM1-212ENST00000560801 LOC102724428A0A0B4J2F2 783 aa11.87□□□□□ -0.51
TRPM1-212ENST00000560801 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms