RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
APH1B-209ENST00000560716 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.69
APH1B-209ENST00000560716 RGPD2P0DJD1 1756 aa10.76□□□□□ -0.69
APH1B-209ENST00000560716 YBX3P16989 372 aaKnown RBP eCLIP10.76□□□□□ -0.69
APH1B-209ENST00000560716 HMGB2P26583 209 aaKnown RBP10.76□□□□□ -0.69
APH1B-209ENST00000560716 NLGN2Q8NFZ4 835 aa10.76□□□□□ -0.69
APH1B-209ENST00000560716 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
APH1B-209ENST00000560716 ATP10DQ9P241 1426 aa10.75□□□□□ -0.69
APH1B-209ENST00000560716 KIF13BQ9NQT8 1826 aa10.75□□□□□ -0.69
APH1B-209ENST00000560716 HSPA6P17066 643 aa10.75□□□□□ -0.69
APH1B-209ENST00000560716 CD2APQ9Y5K6 639 aa10.75□□□□□ -0.69
APH1B-209ENST00000560716 UBR3Q6ZT12 1888 aa10.74□□□□□ -0.69
APH1B-209ENST00000560716 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
APH1B-209ENST00000560716 PUS7Q96PZ0 661 aaKnown RBP10.74□□□□□ -0.69
APH1B-209ENST00000560716 TOGARAM1Q9Y4F4 1720 aa10.74□□□□□ -0.69
APH1B-209ENST00000560716 EDC4Q6P2E9 1401 aaKnown RBP10.74□□□□□ -0.69
APH1B-209ENST00000560716 ITGB4P16144 1822 aa10.73□□□□□ -0.69
APH1B-209ENST00000560716 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
APH1B-209ENST00000560716 MAP2P11137 1827 aaKnown RBP10.72□□□□□ -0.69
APH1B-209ENST00000560716 IP6K1Q92551 441 aa10.72□□□□□ -0.69
APH1B-209ENST00000560716 TFCP2L1Q9NZI6 479 aa10.72□□□□□ -0.69
APH1B-209ENST00000560716 KIAA1551Q9HCM1 1747 aa10.72□□□□□ -0.69
APH1B-209ENST00000560716 CGNL1Q0VF96 1302 aa10.71□□□□□ -0.69
APH1B-209ENST00000560716 COL23A1Q86Y22 540 aaPredicted RBP10.71□□□□□ -0.69
APH1B-209ENST00000560716 FLAD1Q8NFF5 587 aa10.71□□□□□ -0.69
APH1B-209ENST00000560716 BRCA1P38398 1863 aaKnown RBP10.7□□□□□ -0.7
APH1B-209ENST00000560716 C4BP0C0L5 1744 aa10.7□□□□□ -0.7
APH1B-209ENST00000560716 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
APH1B-209ENST00000560716 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
APH1B-209ENST00000560716 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
APH1B-209ENST00000560716 L3MBTL2Q969R5 705 aa10.69□□□□□ -0.7
APH1B-209ENST00000560716 GPBP1L1Q9HC44 474 aaPredicted RBP10.69□□□□□ -0.7
APH1B-209ENST00000560716 PKD1L3Q7Z443 1732 aa10.69□□□□□ -0.7
APH1B-209ENST00000560716 ZNF831Q5JPB2 1677 aa10.69□□□□□ -0.7
APH1B-209ENST00000560716 MEGF6O75095 1541 aa10.68□□□□□ -0.7
APH1B-209ENST00000560716 SOX12O15370 315 aa10.68□□□□□ -0.7
APH1B-209ENST00000560716 ATXN8OSP0DMR3 200 aa10.68□□□□□ -0.7
APH1B-209ENST00000560716 NME9Q86XW9 330 aa10.68□□□□□ -0.7
APH1B-209ENST00000560716 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
APH1B-209ENST00000560716 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
APH1B-209ENST00000560716 KIF3CO14782 793 aa10.67□□□□□ -0.7
APH1B-209ENST00000560716 DNAJC5GQ8N7S2 189 aa10.67□□□□□ -0.7
APH1B-209ENST00000560716 ZCRB1Q8TBF4 217 aaKnown RBP10.67□□□□□ -0.7
APH1B-209ENST00000560716 CCNL1Q9UK58 526 aaPredicted RBP10.67□□□□□ -0.7
APH1B-209ENST00000560716 ARFGEF1Q9Y6D6 1849 aa10.67□□□□□ -0.7
APH1B-209ENST00000560716 NSD3Q9BZ95 1437 aa10.67□□□□□ -0.7
APH1B-209ENST00000560716 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
APH1B-209ENST00000560716 USP47Q96K76 1375 aa10.66□□□□□ -0.7
APH1B-209ENST00000560716 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
APH1B-209ENST00000560716 DDX54Q8TDD1 881 aaKnown RBP10.66□□□□□ -0.7
APH1B-209ENST00000560716 A0A1W2PP64 1363 aa10.65□□□□□ -0.7
APH1B-209ENST00000560716 APLP1P51693 650 aa10.65□□□□□ -0.7
APH1B-209ENST00000560716 HDGFL2Q7Z4V5 671 aaPredicted RBP10.65□□□□□ -0.7
APH1B-209ENST00000560716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
APH1B-209ENST00000560716 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
APH1B-209ENST00000560716 KIF24Q5T7B8 1368 aa10.65□□□□□ -0.71
APH1B-209ENST00000560716 HOXC9P31274 260 aa10.64□□□□□ -0.71
APH1B-209ENST00000560716 KCNQ4P56696 695 aa10.64□□□□□ -0.71
APH1B-209ENST00000560716 TERF2IPQ9NYB0 399 aa10.64□□□□□ -0.71
APH1B-209ENST00000560716 NCAPD2Q15021 1401 aa10.64□□□□□ -0.71
APH1B-209ENST00000560716 MAP3K19Q56UN5 1328 aa10.63□□□□□ -0.71
APH1B-209ENST00000560716 ANKRD26Q9UPS8 1709 aa10.63□□□□□ -0.71
APH1B-209ENST00000560716 C10orf71Q711Q0 1435 aa10.62□□□□□ -0.71
APH1B-209ENST00000560716 TOMM70O94826 608 aa10.62□□□□□ -0.71
APH1B-209ENST00000560716 SLC12A5Q9H2X9 1139 aa10.62□□□□□ -0.71
APH1B-209ENST00000560716 N4BP2Q86UW6 1770 aaPredicted RBP10.62□□□□□ -0.71
APH1B-209ENST00000560716 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
APH1B-209ENST00000560716 SSFA2P28290 1259 aa10.61□□□□□ -0.71
APH1B-209ENST00000560716 NKX1-1Q15270 411 aaPredicted RBP10.61□□□□□ -0.71
APH1B-209ENST00000560716 JMYQ8N9B5 988 aa10.61□□□□□ -0.71
APH1B-209ENST00000560716 SMARCC1Q92922 1105 aaPredicted RBP10.61□□□□□ -0.71
APH1B-209ENST00000560716 SYTL4Q96C24 671 aaPredicted RBP10.61□□□□□ -0.71
APH1B-209ENST00000560716 SBF1O95248 1867 aa10.61□□□□□ -0.71
APH1B-209ENST00000560716 PALLDQ8WX93 1383 aa10.61□□□□□ -0.71
APH1B-209ENST00000560716 PLEKHG2Q9H7P9 1386 aa10.61□□□□□ -0.71
APH1B-209ENST00000560716 COL5A3P25940 1745 aaPredicted RBP10.61□□□□□ -0.71
APH1B-209ENST00000560716 INSRP06213 1382 aa10.6□□□□□ -0.71
APH1B-209ENST00000560716 KIF20BQ96Q89 1820 aa10.6□□□□□ -0.71
APH1B-209ENST00000560716 TNRC6CQ9HCJ0 1690 aaKnown RBP10.6□□□□□ -0.71
APH1B-209ENST00000560716 PCDH11XQ9BZA7 1347 aa10.59□□□□□ -0.71
APH1B-209ENST00000560716 PCDH11YQ9BZA8 1340 aa10.59□□□□□ -0.71
APH1B-209ENST00000560716 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
APH1B-209ENST00000560716 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
APH1B-209ENST00000560716 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
APH1B-209ENST00000560716 PXDNLA1KZ92 1463 aa10.59□□□□□ -0.71
APH1B-209ENST00000560716 TGFB2P61812 414 aa10.58□□□□□ -0.72
APH1B-209ENST00000560716 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
APH1B-209ENST00000560716 COG3Q96JB2 828 aa10.58□□□□□ -0.72
APH1B-209ENST00000560716 C4AP0C0L4 1744 aa10.58□□□□□ -0.72
APH1B-209ENST00000560716 CYP27B1O15528 508 aa10.57□□□□□ -0.72
APH1B-209ENST00000560716 AMPHP49418 695 aa10.57□□□□□ -0.72
APH1B-209ENST00000560716 RBM46Q8TBY0 533 aaKnown RBP10.57□□□□□ -0.72
APH1B-209ENST00000560716 U3KPZ7 1027 aaPredicted RBP10.57□□□□□ -0.72
APH1B-209ENST00000560716 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
APH1B-209ENST00000560716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.56□□□□□ -0.72
APH1B-209ENST00000560716 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
APH1B-209ENST00000560716 FSTL1Q12841 308 aa10.56□□□□□ -0.72
APH1B-209ENST00000560716 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
APH1B-209ENST00000560716 RAPGEF4Q8WZA2 1011 aa10.56□□□□□ -0.72
APH1B-209ENST00000560716 LTV1Q96GA3 475 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms