RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 ANP32CO43423 234 aa14.96□□□□□ -0.01
SNRPCP18-201ENST00000560619 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.01
SNRPCP18-201ENST00000560619 MEGF6O75095 1541 aa14.94□□□□□ -0.02
SNRPCP18-201ENST00000560619 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
SNRPCP18-201ENST00000560619 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
SNRPCP18-201ENST00000560619 PKD1L3Q7Z443 1732 aa14.94□□□□□ -0.02
SNRPCP18-201ENST00000560619 USHBP1Q8N6Y0 703 aa14.93□□□□□ -0.02
SNRPCP18-201ENST00000560619 MARCH10Q8NA82 808 aaPredicted RBP14.93□□□□□ -0.02
SNRPCP18-201ENST00000560619 SPG7Q9UQ90 795 aa14.93□□□□□ -0.02
SNRPCP18-201ENST00000560619 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
SNRPCP18-201ENST00000560619 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
SNRPCP18-201ENST00000560619 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
SNRPCP18-201ENST00000560619 FCHSD2O94868 740 aa14.91□□□□□ -0.02
SNRPCP18-201ENST00000560619 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
SNRPCP18-201ENST00000560619 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
SNRPCP18-201ENST00000560619 MIER1Q8N108 512 aa14.91□□□□□ -0.02
SNRPCP18-201ENST00000560619 UPF1Q92900 1129 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNRPCP18-201ENST00000560619 SHANK3Q9BYB0 1731 aa14.9□□□□□ -0.02
SNRPCP18-201ENST00000560619 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
SNRPCP18-201ENST00000560619 SBF2Q86WG5 1849 aa14.89□□□□□ -0.03
SNRPCP18-201ENST00000560619 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
SNRPCP18-201ENST00000560619 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
SNRPCP18-201ENST00000560619 IFNL2Q8IZJ0 200 aa14.88□□□□□ -0.03
SNRPCP18-201ENST00000560619 BCL11BQ9C0K0 894 aaPredicted RBP14.88□□□□□ -0.03
SNRPCP18-201ENST00000560619 U2SURPO15042 1029 aaKnown RBP14.87□□□□□ -0.03
SNRPCP18-201ENST00000560619 DDX54Q8TDD1 881 aaKnown RBP14.87□□□□□ -0.03
SNRPCP18-201ENST00000560619 CYP27B1O15528 508 aa14.86□□□□□ -0.03
SNRPCP18-201ENST00000560619 U2AF1L5P0DN76 240 aaPredicted RBP14.86□□□□□ -0.03
SNRPCP18-201ENST00000560619 U2AF1Q01081 240 aaKnown RBP eCLIP14.86□□□□□ -0.03
SNRPCP18-201ENST00000560619 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
SNRPCP18-201ENST00000560619 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
SNRPCP18-201ENST00000560619 HMOX1P09601 288 aa14.85□□□□□ -0.03
SNRPCP18-201ENST00000560619 PHKG2P15735 406 aa14.85□□□□□ -0.03
SNRPCP18-201ENST00000560619 FAM182BQ5T319 152 aa14.84□□□□□ -0.03
SNRPCP18-201ENST00000560619 NHSQ6T4R5 1651 aa14.84□□□□□ -0.03
SNRPCP18-201ENST00000560619 PLSCR1O15162 318 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 TRIM37O94972 964 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 AKAP4Q5JQC9 854 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 GAS2L2Q8NHY3 880 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 DCAF5Q96JK2 942 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 TNS1Q9HBL0 1735 aaKnown RBP14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 KAT6BQ8WYB5 2073 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 EP400Q96L91 3159 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.04
SNRPCP18-201ENST00000560619 ERVV-2B6SEH9 535 aa14.82□□□□□ -0.04
SNRPCP18-201ENST00000560619 NEFMP07197 916 aa14.82□□□□□ -0.04
SNRPCP18-201ENST00000560619 HMGB2P26583 209 aaKnown RBP14.82□□□□□ -0.04
SNRPCP18-201ENST00000560619 BAG6P46379 1132 aa14.82□□□□□ -0.04
SNRPCP18-201ENST00000560619 C1orf141Q5JVX7 400 aa14.82□□□□□ -0.04
SNRPCP18-201ENST00000560619 ZNF530Q6P9A1 599 aaPredicted RBP14.82□□□□□ -0.04
SNRPCP18-201ENST00000560619 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
SNRPCP18-201ENST00000560619 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
SNRPCP18-201ENST00000560619 HTATSF1O43719 755 aaKnown RBP14.8□□□□□ -0.04
SNRPCP18-201ENST00000560619 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
SNRPCP18-201ENST00000560619 CCER2I3L3R5 266 aa14.79□□□□□ -0.04
SNRPCP18-201ENST00000560619 WDR43Q15061 677 aaKnown RBP eCLIP14.79□□□□□ -0.04
SNRPCP18-201ENST00000560619 ADAMTS7Q9UKP4 1686 aa14.79□□□□□ -0.04
SNRPCP18-201ENST00000560619 DOT1LQ8TEK3 1739 aa14.78□□□□□ -0.04
SNRPCP18-201ENST00000560619 APBA3O96018 575 aa14.78□□□□□ -0.04
SNRPCP18-201ENST00000560619 PRIM1P49642 420 aaKnown RBP14.78□□□□□ -0.04
SNRPCP18-201ENST00000560619 PHACTR3Q96KR7 559 aa14.78□□□□□ -0.04
SNRPCP18-201ENST00000560619 ITGB4P16144 1822 aa14.78□□□□□ -0.04
SNRPCP18-201ENST00000560619 SCN11AQ9UI33 1791 aa14.78□□□□□ -0.04
SNRPCP18-201ENST00000560619 GNAT3A8MTJ3 354 aa14.77□□□□□ -0.05
SNRPCP18-201ENST00000560619 KCNQ2O43526 872 aa14.77□□□□□ -0.05
SNRPCP18-201ENST00000560619 CAMKK2Q96RR4 588 aa14.77□□□□□ -0.05
SNRPCP18-201ENST00000560619 BTAF1O14981 1849 aa14.76□□□□□ -0.05
SNRPCP18-201ENST00000560619 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
SNRPCP18-201ENST00000560619 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
SNRPCP18-201ENST00000560619 ACSBG1Q96GR2 724 aa14.76□□□□□ -0.05
SNRPCP18-201ENST00000560619 ADAMTS8Q9UP79 889 aa14.76□□□□□ -0.05
SNRPCP18-201ENST00000560619 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 TOGARAM1Q9Y4F4 1720 aa14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 MAPK8IP3Q9UPT6 1336 aa14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 NCBP3Q53F19 620 aaKnown RBP14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 RUNDC1Q96C34 613 aa14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 MRS2Q9HD23 443 aa14.75□□□□□ -0.05
SNRPCP18-201ENST00000560619 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
SNRPCP18-201ENST00000560619 SLC27A3Q5K4L6 730 aa14.74□□□□□ -0.05
SNRPCP18-201ENST00000560619 TMOD3Q9NYL9 352 aa14.74□□□□□ -0.05
SNRPCP18-201ENST00000560619 MRC1P22897 1456 aa14.74□□□□□ -0.05
SNRPCP18-201ENST00000560619 CEMIPQ8WUJ3 1361 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 VIRMAQ69YN4 1812 aaKnown RBP14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 CABP4P57796 275 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 EN1Q05925 392 aaPredicted RBP14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 NFE2L2Q16236 605 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 MPRIPQ6WCQ1 1025 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 PTF1AQ7RTS3 328 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 DEFB132Q7Z7B7 95 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 PIGBQ92521 554 aa14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 SYTL4Q96C24 671 aaPredicted RBP14.73□□□□□ -0.05
SNRPCP18-201ENST00000560619 LY75O60449 1722 aa14.72□□□□□ -0.05
SNRPCP18-201ENST00000560619 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
SNRPCP18-201ENST00000560619 RTF1Q92541 710 aaKnown RBP14.72□□□□□ -0.05
SNRPCP18-201ENST00000560619 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
SNRPCP18-201ENST00000560619 RREB1Q92766 1687 aa14.71□□□□□ -0.05
SNRPCP18-201ENST00000560619 LMOD3Q0VAK6 560 aa14.71□□□□□ -0.05
SNRPCP18-201ENST00000560619 IL17REQ8NFR9 667 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms