RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
MARK3-221ENST00000560603 GOLGB1Q14789 3259 aaKnown RBP16.96■□□□□ 0.31
MARK3-221ENST00000560603 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.3
MARK3-221ENST00000560603 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.3
MARK3-221ENST00000560603 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
MARK3-221ENST00000560603 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
MARK3-221ENST00000560603 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
MARK3-221ENST00000560603 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
MARK3-221ENST00000560603 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
MARK3-221ENST00000560603 USP47Q96K76 1375 aa16.92■□□□□ 0.3
MARK3-221ENST00000560603 MSH5O43196 834 aa16.92■□□□□ 0.3
MARK3-221ENST00000560603 RAPGEF4Q8WZA2 1011 aa16.92■□□□□ 0.3
MARK3-221ENST00000560603 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
MARK3-221ENST00000560603 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
MARK3-221ENST00000560603 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
MARK3-221ENST00000560603 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
MARK3-221ENST00000560603 KCNQ4P56696 695 aa16.91■□□□□ 0.3
MARK3-221ENST00000560603 TESK2Q96S53 571 aa16.91■□□□□ 0.3
MARK3-221ENST00000560603 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
MARK3-221ENST00000560603 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
MARK3-221ENST00000560603 NSD2O96028 1365 aa16.89■□□□□ 0.3
MARK3-221ENST00000560603 LY75O60449 1722 aa16.89■□□□□ 0.29
MARK3-221ENST00000560603 MEGF6O75095 1541 aa16.89■□□□□ 0.29
MARK3-221ENST00000560603 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
MARK3-221ENST00000560603 FBLN1P23142 703 aa16.88■□□□□ 0.29
MARK3-221ENST00000560603 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
MARK3-221ENST00000560603 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
MARK3-221ENST00000560603 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
MARK3-221ENST00000560603 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
MARK3-221ENST00000560603 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
MARK3-221ENST00000560603 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
MARK3-221ENST00000560603 TMF1P82094 1093 aa16.86■□□□□ 0.29
MARK3-221ENST00000560603 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
MARK3-221ENST00000560603 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
MARK3-221ENST00000560603 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
MARK3-221ENST00000560603 FYB1O15117 783 aa16.85■□□□□ 0.29
MARK3-221ENST00000560603 USHBP1Q8N6Y0 703 aa16.85■□□□□ 0.29
MARK3-221ENST00000560603 GGNBP2Q9H3C7 697 aa16.85■□□□□ 0.29
MARK3-221ENST00000560603 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
MARK3-221ENST00000560603 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
MARK3-221ENST00000560603 INSRP06213 1382 aa16.83■□□□□ 0.28
MARK3-221ENST00000560603 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
MARK3-221ENST00000560603 KIF24Q5T7B8 1368 aa16.83■□□□□ 0.28
MARK3-221ENST00000560603 CEP350Q5VT06 3117 aa16.83■□□□□ 0.28
MARK3-221ENST00000560603 SMARCC1Q92922 1105 aaPredicted RBP16.83■□□□□ 0.28
MARK3-221ENST00000560603 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.28
MARK3-221ENST00000560603 FLT4P35916 1363 aa16.82■□□□□ 0.28
MARK3-221ENST00000560603 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
MARK3-221ENST00000560603 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
MARK3-221ENST00000560603 YBX3P16989 372 aaKnown RBP eCLIP16.81■□□□□ 0.28
MARK3-221ENST00000560603 HSP90AB2PQ58FF8 381 aa16.81■□□□□ 0.28
MARK3-221ENST00000560603 MPRIPQ6WCQ1 1025 aa16.81■□□□□ 0.28
MARK3-221ENST00000560603 AK7Q96M32 723 aa16.8■□□□□ 0.28
MARK3-221ENST00000560603 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
MARK3-221ENST00000560603 C5P01031 1676 aa16.78■□□□□ 0.28
MARK3-221ENST00000560603 CYP27B1O15528 508 aa16.77■□□□□ 0.28
MARK3-221ENST00000560603 SPG7Q9UQ90 795 aa16.76■□□□□ 0.27
MARK3-221ENST00000560603 GPBP1L1Q9HC44 474 aaPredicted RBP16.75■□□□□ 0.27
MARK3-221ENST00000560603 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
MARK3-221ENST00000560603 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
MARK3-221ENST00000560603 KIF20BQ96Q89 1820 aa16.74■□□□□ 0.27
MARK3-221ENST00000560603 PHF14O94880 888 aa16.73■□□□□ 0.27
MARK3-221ENST00000560603 SSFA2P28290 1259 aa16.73■□□□□ 0.27
MARK3-221ENST00000560603 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
MARK3-221ENST00000560603 PIGBQ92521 554 aa16.73■□□□□ 0.27
MARK3-221ENST00000560603 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
MARK3-221ENST00000560603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
MARK3-221ENST00000560603 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
MARK3-221ENST00000560603 PPM1GO15355 546 aaPredicted RBP16.72■□□□□ 0.27
MARK3-221ENST00000560603 SIK1P57059 783 aa16.72■□□□□ 0.27
MARK3-221ENST00000560603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.271e-6■■■□□ 17.3
MARK3-221ENST00000560603 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
MARK3-221ENST00000560603 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
MARK3-221ENST00000560603 ITGB4P16144 1822 aa16.7■□□□□ 0.26
MARK3-221ENST00000560603 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
MARK3-221ENST00000560603 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
MARK3-221ENST00000560603 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
MARK3-221ENST00000560603 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
MARK3-221ENST00000560603 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
MARK3-221ENST00000560603 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
MARK3-221ENST00000560603 TOGARAM1Q9Y4F4 1720 aa16.68■□□□□ 0.26
MARK3-221ENST00000560603 ADCY9O60503 1353 aa16.68■□□□□ 0.26
MARK3-221ENST00000560603 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
MARK3-221ENST00000560603 GNPATO15228 680 aa16.68■□□□□ 0.26
MARK3-221ENST00000560603 ZNF526Q8TF50 670 aaPredicted RBP16.68■□□□□ 0.26
MARK3-221ENST00000560603 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
MARK3-221ENST00000560603 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
MARK3-221ENST00000560603 AMIGO3Q86WK7 504 aa16.67■□□□□ 0.26
MARK3-221ENST00000560603 LINC00116Q8NCU8 138 aa16.67■□□□□ 0.26
MARK3-221ENST00000560603 EYA1Q99502 592 aa16.67■□□□□ 0.26
MARK3-221ENST00000560603 HSPA6P17066 643 aa16.66■□□□□ 0.26
MARK3-221ENST00000560603 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
MARK3-221ENST00000560603 PHKG2P15735 406 aa16.65■□□□□ 0.26
MARK3-221ENST00000560603 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
MARK3-221ENST00000560603 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.26
MARK3-221ENST00000560603 MAP2P11137 1827 aaKnown RBP16.64■□□□□ 0.25
MARK3-221ENST00000560603 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
MARK3-221ENST00000560603 MMP10P09238 476 aa16.63■□□□□ 0.25
MARK3-221ENST00000560603 ITPK1Q13572 414 aa16.63■□□□□ 0.25
MARK3-221ENST00000560603 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms