RNA–Protein interactions for RNA: ENST00000560566.5

CLU-217, Transcript of clusterin, humanhuman

TSL 4

Gene CLU, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLU-217ENST00000560566 WNK3Q9BYP7 1800 aa18.14■□□□□ 0.49
CLU-217ENST00000560566 RGPD2P0DJD1 1756 aa18.13■□□□□ 0.49
CLU-217ENST00000560566 CCDC125Q86Z20 511 aa18.13■□□□□ 0.49
CLU-217ENST00000560566 UPF1Q92900 1129 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLU-217ENST00000560566 KDRP35968 1356 aa18.13■□□□□ 0.49
CLU-217ENST00000560566 BCL9O00512 1426 aa18.13■□□□□ 0.49
CLU-217ENST00000560566 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
CLU-217ENST00000560566 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
CLU-217ENST00000560566 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
CLU-217ENST00000560566 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
CLU-217ENST00000560566 SPG7Q9UQ90 795 aa18.1■□□□□ 0.49
CLU-217ENST00000560566 RGPD1P0DJD0 1748 aa18.09■□□□□ 0.49
CLU-217ENST00000560566 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
CLU-217ENST00000560566 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
CLU-217ENST00000560566 PCDH11XQ9BZA7 1347 aa18.08■□□□□ 0.49
CLU-217ENST00000560566 PCDH11YQ9BZA8 1340 aa18.08■□□□□ 0.49
CLU-217ENST00000560566 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
CLU-217ENST00000560566 EP400Q96L91 3159 aa18.07■□□□□ 0.48
CLU-217ENST00000560566 ANP32CO43423 234 aa18.07■□□□□ 0.48
CLU-217ENST00000560566 PLEKHO1Q53GL0 409 aaPredicted RBP18.07■□□□□ 0.48
CLU-217ENST00000560566 HMOX1P09601 288 aa18.06■□□□□ 0.48
CLU-217ENST00000560566 CYP27B1O15528 508 aa18.05■□□□□ 0.48
CLU-217ENST00000560566 TRIM37O94972 964 aa18.04■□□□□ 0.48
CLU-217ENST00000560566 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
CLU-217ENST00000560566 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLU-217ENST00000560566 SF3B2Q13435 895 aaKnown RBP18.04■□□□□ 0.48
CLU-217ENST00000560566 NKX1-1Q15270 411 aaPredicted RBP18.04■□□□□ 0.48
CLU-217ENST00000560566 FCHSD2O94868 740 aa18.03■□□□□ 0.48
CLU-217ENST00000560566 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
CLU-217ENST00000560566 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
CLU-217ENST00000560566 PHKG2P15735 406 aa18.02■□□□□ 0.48
CLU-217ENST00000560566 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.48
CLU-217ENST00000560566 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
CLU-217ENST00000560566 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
CLU-217ENST00000560566 SHANK3Q9BYB0 1731 aa17.99■□□□□ 0.47
CLU-217ENST00000560566 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
CLU-217ENST00000560566 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
CLU-217ENST00000560566 KCNQ2O43526 872 aa17.98■□□□□ 0.47
CLU-217ENST00000560566 BAG6P46379 1132 aa17.98■□□□□ 0.47
CLU-217ENST00000560566 C1orf141Q5JVX7 400 aa17.98■□□□□ 0.47
CLU-217ENST00000560566 ACSBG1Q96GR2 724 aa17.98■□□□□ 0.47
CLU-217ENST00000560566 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
CLU-217ENST00000560566 APBA3O96018 575 aa17.97■□□□□ 0.47
CLU-217ENST00000560566 PRIM1P49642 420 aaKnown RBP17.97■□□□□ 0.47
CLU-217ENST00000560566 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
CLU-217ENST00000560566 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
CLU-217ENST00000560566 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
CLU-217ENST00000560566 PLSCR1O15162 318 aa17.96■□□□□ 0.47
CLU-217ENST00000560566 PTF1AQ7RTS3 328 aa17.96■□□□□ 0.47
CLU-217ENST00000560566 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
CLU-217ENST00000560566 DEFB132Q7Z7B7 95 aa17.95■□□□□ 0.46
CLU-217ENST00000560566 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
CLU-217ENST00000560566 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
CLU-217ENST00000560566 NEFMP07197 916 aa17.94■□□□□ 0.46
CLU-217ENST00000560566 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLU-217ENST00000560566 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
CLU-217ENST00000560566 EN1Q05925 392 aaPredicted RBP17.93■□□□□ 0.46
CLU-217ENST00000560566 SYTL4Q96C24 671 aaPredicted RBP17.93■□□□□ 0.46
CLU-217ENST00000560566 CAMKK2Q96RR4 588 aa17.93■□□□□ 0.46
CLU-217ENST00000560566 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
CLU-217ENST00000560566 NHSQ6T4R5 1651 aa17.93■□□□□ 0.46
CLU-217ENST00000560566 TNS1Q9HBL0 1735 aaKnown RBP17.92■□□□□ 0.46
CLU-217ENST00000560566 CCDC184Q52MB2 194 aa17.91■□□□□ 0.46
CLU-217ENST00000560566 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
CLU-217ENST00000560566 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
CLU-217ENST00000560566 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
CLU-217ENST00000560566 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
CLU-217ENST00000560566 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
CLU-217ENST00000560566 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
CLU-217ENST00000560566 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
CLU-217ENST00000560566 PIGBQ92521 554 aa17.89■□□□□ 0.45
CLU-217ENST00000560566 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
CLU-217ENST00000560566 MAP3K5Q99683 1374 aa17.89■□□□□ 0.45
CLU-217ENST00000560566 RNMTO43148 476 aaKnown RBP17.88■□□□□ 0.45
CLU-217ENST00000560566 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
CLU-217ENST00000560566 CABP4P57796 275 aa17.88■□□□□ 0.45
CLU-217ENST00000560566 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
CLU-217ENST00000560566 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
CLU-217ENST00000560566 MAPK8IP3Q9UPT6 1336 aa17.88■□□□□ 0.45
CLU-217ENST00000560566 DOT1LQ8TEK3 1739 aa17.87■□□□□ 0.45
CLU-217ENST00000560566 SMARCC1Q92922 1105 aaPredicted RBP17.87■□□□□ 0.45
CLU-217ENST00000560566 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
CLU-217ENST00000560566 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
CLU-217ENST00000560566 PROM2Q8N271 834 aa17.86■□□□□ 0.45
CLU-217ENST00000560566 IL17REQ8NFR9 667 aa17.86■□□□□ 0.45
CLU-217ENST00000560566 RUNDC1Q96C34 613 aa17.86■□□□□ 0.45
CLU-217ENST00000560566 TXNRD1Q16881 649 aa17.85■□□□□ 0.45
CLU-217ENST00000560566 NFATC2IPQ8NCF5 419 aa17.85■□□□□ 0.45
CLU-217ENST00000560566 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
CLU-217ENST00000560566 SLC52A2Q9HAB3 445 aa17.85■□□□□ 0.45
CLU-217ENST00000560566 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
CLU-217ENST00000560566 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
CLU-217ENST00000560566 SLC27A3Q5K4L6 730 aa17.84■□□□□ 0.45
CLU-217ENST00000560566 BTAF1O14981 1849 aa17.84■□□□□ 0.45
CLU-217ENST00000560566 RGPD3A6NKT7 1758 aaPredicted RBP17.84■□□□□ 0.45
CLU-217ENST00000560566 RGPD4Q7Z3J3 1758 aa17.84■□□□□ 0.45
CLU-217ENST00000560566 ADAMTS7Q9UKP4 1686 aa17.83■□□□□ 0.44
CLU-217ENST00000560566 MRC1P22897 1456 aa17.82■□□□□ 0.44
CLU-217ENST00000560566 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
CLU-217ENST00000560566 CCER2I3L3R5 266 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms