RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
CCDC33-209ENST00000560565 FYB1O15117 783 aa10.85□□□□□ -0.67
CCDC33-209ENST00000560565 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
CCDC33-209ENST00000560565 FRAT1Q92837 279 aaPredicted RBP10.85□□□□□ -0.67
CCDC33-209ENST00000560565 STRN4Q9NRL3 753 aa10.85□□□□□ -0.67
CCDC33-209ENST00000560565 SALL2Q9Y467 1007 aaPredicted RBP10.85□□□□□ -0.67
CCDC33-209ENST00000560565 CPDO75976 1380 aa10.85□□□□□ -0.67
CCDC33-209ENST00000560565 A0A0G2JS52 829 aa10.84□□□□□ -0.67
CCDC33-209ENST00000560565 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
CCDC33-209ENST00000560565 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
CCDC33-209ENST00000560565 KCNH5Q8NCM2 988 aa10.84□□□□□ -0.67
CCDC33-209ENST00000560565 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
CCDC33-209ENST00000560565 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
CCDC33-209ENST00000560565 AATKQ6ZMQ8 1374 aa10.83□□□□□ -0.68
CCDC33-209ENST00000560565 SOX12O15370 315 aa10.83□□□□□ -0.68
CCDC33-209ENST00000560565 FAM98CQ17RN3 349 aaKnown RBP10.83□□□□□ -0.68
CCDC33-209ENST00000560565 C8orf34Q49A92 452 aa10.83□□□□□ -0.68
CCDC33-209ENST00000560565 CFAP53Q96M91 514 aa10.83□□□□□ -0.68
CCDC33-209ENST00000560565 UTRNP46939 3433 aa10.83□□□□□ -0.68
CCDC33-209ENST00000560565 ZNF521Q96K83 1311 aa10.83□□□□□ -0.68
CCDC33-209ENST00000560565 BRWD3Q6RI45 1802 aa10.82□□□□□ -0.68
CCDC33-209ENST00000560565 DUSP27Q5VZP5 1158 aa10.82□□□□□ -0.68
CCDC33-209ENST00000560565 NME9Q86XW9 330 aa10.82□□□□□ -0.68
CCDC33-209ENST00000560565 SLIT3O75094 1523 aa10.82□□□□□ -0.68
CCDC33-209ENST00000560565 CAMTA1Q9Y6Y1 1673 aa10.82□□□□□ -0.68
CCDC33-209ENST00000560565 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 SLFN5Q08AF3 891 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 COL13A1Q5TAT6 717 aaPredicted RBP10.81□□□□□ -0.68
CCDC33-209ENST00000560565 ARHGEF25Q86VW2 580 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 OVOS2A0A0J9YW53 1432 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 OVOS2Q6IE36 1432 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 SPATA31A1Q5TZJ5 1347 aa10.81□□□□□ -0.68
CCDC33-209ENST00000560565 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
CCDC33-209ENST00000560565 KRT27Q7Z3Y8 459 aa10.8□□□□□ -0.68
CCDC33-209ENST00000560565 TRMT2AQ8IZ69 625 aaKnown RBP10.8□□□□□ -0.68
CCDC33-209ENST00000560565 COG3Q96JB2 828 aa10.8□□□□□ -0.68
CCDC33-209ENST00000560565 GGNBP2Q9H3C7 697 aa10.8□□□□□ -0.68
CCDC33-209ENST00000560565 LTN1O94822 1766 aa10.8□□□□□ -0.68
CCDC33-209ENST00000560565 LMO7Q8WWI1 1683 aa10.79□□□□□ -0.68
CCDC33-209ENST00000560565 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
CCDC33-209ENST00000560565 CANXP27824 592 aaKnown RBP10.79□□□□□ -0.68
CCDC33-209ENST00000560565 CDCA7LQ96GN5 454 aa10.79□□□□□ -0.68
CCDC33-209ENST00000560565 CFAP44Q96MT7 982 aa10.79□□□□□ -0.68
CCDC33-209ENST00000560565 AXIN2Q9Y2T1 843 aa10.79□□□□□ -0.68
CCDC33-209ENST00000560565 GOLGA6L3A6NEY3 463 aa10.78□□□□□ -0.68
CCDC33-209ENST00000560565 DDX11L8A8MPP1 907 aa10.78□□□□□ -0.68
CCDC33-209ENST00000560565 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
CCDC33-209ENST00000560565 MTHFSP49914 203 aa10.78□□□□□ -0.68
CCDC33-209ENST00000560565 TCP11L2Q8N4U5 519 aa10.78□□□□□ -0.68
CCDC33-209ENST00000560565 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
CCDC33-209ENST00000560565 ADAMTS8Q9UP79 889 aa10.78□□□□□ -0.68
CCDC33-209ENST00000560565 COL3A1P02461 1466 aaPredicted RBP10.78□□□□□ -0.68
CCDC33-209ENST00000560565 COL5A2P05997 1499 aaPredicted RBP10.78□□□□□ -0.68
CCDC33-209ENST00000560565 COL18A1P39060 1754 aa10.77□□□□□ -0.68
CCDC33-209ENST00000560565 RGPD5Q99666 1765 aa10.77□□□□□ -0.68
CCDC33-209ENST00000560565 BARGINQ6ZT62 677 aa10.77□□□□□ -0.69
CCDC33-209ENST00000560565 TOM1L2Q6ZVM7 507 aa10.77□□□□□ -0.69
CCDC33-209ENST00000560565 CLUAP1Q96AJ1 413 aa10.77□□□□□ -0.69
CCDC33-209ENST00000560565 RWDD1Q9H446 243 aaPredicted RBP10.77□□□□□ -0.69
CCDC33-209ENST00000560565 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
CCDC33-209ENST00000560565 THRAP3Q9Y2W1 955 aaKnown RBP10.77□□□□□ -0.69
CCDC33-209ENST00000560565 NFAT5O94916 1531 aa10.77□□□□□ -0.69
CCDC33-209ENST00000560565 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.69
CCDC33-209ENST00000560565 CRB1P82279 1406 aa10.76□□□□□ -0.69
CCDC33-209ENST00000560565 PLIN1O60240 522 aa10.76□□□□□ -0.69
CCDC33-209ENST00000560565 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
CCDC33-209ENST00000560565 MRE11P49959 708 aa10.76□□□□□ -0.69
CCDC33-209ENST00000560565 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
CCDC33-209ENST00000560565 WDR17Q8IZU2 1322 aa10.76□□□□□ -0.69
CCDC33-209ENST00000560565 FRAT2O75474 233 aaPredicted RBP10.75□□□□□ -0.69
CCDC33-209ENST00000560565 SKOR2Q2VWA4 1001 aaPredicted RBP10.75□□□□□ -0.69
CCDC33-209ENST00000560565 PNNQ9H307 717 aaKnown RBP10.75□□□□□ -0.69
CCDC33-209ENST00000560565 THSD7AQ9UPZ6 1657 aa10.75□□□□□ -0.69
CCDC33-209ENST00000560565 DLG5Q8TDM6 1919 aa10.74□□□□□ -0.69
CCDC33-209ENST00000560565 RRP9O43818 475 aaKnown RBP10.74□□□□□ -0.69
CCDC33-209ENST00000560565 SF3B2Q13435 895 aaKnown RBP10.74□□□□□ -0.69
CCDC33-209ENST00000560565 FAM182BQ5T319 152 aa10.74□□□□□ -0.69
CCDC33-209ENST00000560565 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
CCDC33-209ENST00000560565 RGPD1P0DJD0 1748 aa10.74□□□□□ -0.69
CCDC33-209ENST00000560565 PEAK1Q9H792 1746 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 CLCN1P35523 988 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
CCDC33-209ENST00000560565 RGS3P49796 1198 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 WDR63Q8IWG1 891 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 TNS4Q8IZW8 715 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 ANP32BQ92688 251 aaKnown RBP10.73□□□□□ -0.69
CCDC33-209ENST00000560565 CARD10Q9BWT7 1032 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 POLKQ9UBT6 870 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
CCDC33-209ENST00000560565 ABCC6O95255 1503 aa10.73□□□□□ -0.69
CCDC33-209ENST00000560565 DIAPH1O60610 1272 aaKnown RBP10.72□□□□□ -0.69
CCDC33-209ENST00000560565 FBLN1P23142 703 aa10.72□□□□□ -0.69
CCDC33-209ENST00000560565 R3HDM1Q15032 1099 aaKnown RBP10.72□□□□□ -0.69
CCDC33-209ENST00000560565 FAM196AQ6ZSG2 479 aa10.72□□□□□ -0.69
CCDC33-209ENST00000560565 IP6K1Q92551 441 aa10.72□□□□□ -0.69
CCDC33-209ENST00000560565 TBC1D32Q96NH3 1257 aa10.72□□□□□ -0.69
CCDC33-209ENST00000560565 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
CCDC33-209ENST00000560565 MYH16Q9H6N6 1097 aa10.72□□□□□ -0.69
CCDC33-209ENST00000560565 RTL1A6NKG5 1358 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms