RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 STK17AQ9UEE5 414 aa7.84□□□□□ -1.15
TMOD3-207ENST00000560549 PTSQ03393 145 aa7.83□□□□□ -1.16
TMOD3-207ENST00000560549 FOXD4L5Q5VV16 416 aaPredicted RBP7.83□□□□□ -1.16
TMOD3-207ENST00000560549 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
TMOD3-207ENST00000560549 TRIM52Q96A61 297 aa7.83□□□□□ -1.16
TMOD3-207ENST00000560549 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
TMOD3-207ENST00000560549 RNF20Q5VTR2 975 aa7.82□□□□□ -1.16
TMOD3-207ENST00000560549 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
TMOD3-207ENST00000560549 FIGNL2A6NMB9 653 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
TMOD3-207ENST00000560549 ZNF330Q9Y3S2 320 aaPredicted RBP7.81□□□□□ -1.16
TMOD3-207ENST00000560549 POM121CA8CG34 1229 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 ADAMTS19Q8TE59 1207 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 CLUAP1Q96AJ1 413 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 PRM3Q9NNZ6 103 aa7.81□□□□□ -1.16
TMOD3-207ENST00000560549 SENP3-EIF4A1A0A087X0R7 540 aa7.8□□□□□ -1.16
TMOD3-207ENST00000560549 TRAK2O60296 914 aa7.8□□□□□ -1.16
TMOD3-207ENST00000560549 EIF4G2P78344 907 aaKnown RBP eCLIP7.8□□□□□ -1.16
TMOD3-207ENST00000560549 FLIIQ13045 1269 aa7.8□□□□□ -1.16
TMOD3-207ENST00000560549 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
TMOD3-207ENST00000560549 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
TMOD3-207ENST00000560549 UBTFP17480 764 aaKnown RBP7.79□□□□□ -1.16
TMOD3-207ENST00000560549 RNF144AP50876 292 aaPredicted RBP7.79□□□□□ -1.16
TMOD3-207ENST00000560549 ARXQ96QS3 562 aa7.79□□□□□ -1.16
TMOD3-207ENST00000560549 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
TMOD3-207ENST00000560549 CHIC2Q9UKJ5 165 aa7.79□□□□□ -1.16
TMOD3-207ENST00000560549 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
TMOD3-207ENST00000560549 GPC1P35052 558 aa7.78□□□□□ -1.16
TMOD3-207ENST00000560549 WASHC4Q2M389 1173 aa7.78□□□□□ -1.16
TMOD3-207ENST00000560549 STAU1O95793 577 aaKnown RBP7.77□□□□□ -1.17
TMOD3-207ENST00000560549 C14orf37Q86TY3 774 aa7.77□□□□□ -1.17
TMOD3-207ENST00000560549 GPR161Q8N6U8 529 aaKnown RBP7.77□□□□□ -1.17
TMOD3-207ENST00000560549 ZSCAN1Q8NBB4 408 aa7.77□□□□□ -1.17
TMOD3-207ENST00000560549 KRT76Q01546 638 aa7.76□□□□□ -1.17
TMOD3-207ENST00000560549 ALG2Q9H553 416 aa7.76□□□□□ -1.17
TMOD3-207ENST00000560549 A0A1W2PRU2 124 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 ITGA6P23229 1130 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 LYSMD3Q7Z3D4 306 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 FNBP4Q8N3X1 1017 aaPredicted RBP7.75□□□□□ -1.17
TMOD3-207ENST00000560549 RAB6BQ9NRW1 208 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 CLN3Q13286 438 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 SLFNL1Q499Z3 407 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 ARHGEF10LQ9HCE6 1279 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 DOLKQ9UPQ8 538 aa7.75□□□□□ -1.17
TMOD3-207ENST00000560549 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
TMOD3-207ENST00000560549 SEMA3FQ13275 785 aa7.73□□□□□ -1.17
TMOD3-207ENST00000560549 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
TMOD3-207ENST00000560549 PLPP7Q8NBV4 271 aa7.73□□□□□ -1.17
TMOD3-207ENST00000560549 UCN2Q96RP3 112 aa7.73□□□□□ -1.17
TMOD3-207ENST00000560549 HRH3Q9Y5N1 445 aa7.73□□□□□ -1.17
TMOD3-207ENST00000560549 ZCCHC6Q5VYS8 1495 aaKnown RBP7.73□□□□□ -1.17
TMOD3-207ENST00000560549 MEN1O00255 615 aa7.72□□□□□ -1.17
TMOD3-207ENST00000560549 RAD21O60216 631 aa7.72□□□□□ -1.17
TMOD3-207ENST00000560549 IL2RAP01589 272 aa7.72□□□□□ -1.17
TMOD3-207ENST00000560549 SPATA31C2B4DYI2 1134 aa7.71□□□□□ -1.18
TMOD3-207ENST00000560549 GNRH1P01148 92 aa7.71□□□□□ -1.18
TMOD3-207ENST00000560549 SOX11P35716 441 aa7.71□□□□□ -1.18
TMOD3-207ENST00000560549 FAM181BA6NEQ2 426 aa7.7□□□□□ -1.18
TMOD3-207ENST00000560549 RHOQP17081 205 aa7.7□□□□□ -1.18
TMOD3-207ENST00000560549 WDR44Q5JSH3 913 aa7.7□□□□□ -1.18
TMOD3-207ENST00000560549 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
TMOD3-207ENST00000560549 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
TMOD3-207ENST00000560549 CUEDC1Q9NWM3 386 aaPredicted RBP7.7□□□□□ -1.18
TMOD3-207ENST00000560549 SHROOM4Q9ULL8 1493 aa7.7□□□□□ -1.18
TMOD3-207ENST00000560549 RNFT1Q5M7Z0 435 aa7.69□□□□□ -1.18
TMOD3-207ENST00000560549 SV2AQ7L0J3 742 aa7.69□□□□□ -1.18
TMOD3-207ENST00000560549 ERICH6Q7L0X2 663 aa7.69□□□□□ -1.18
TMOD3-207ENST00000560549 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
TMOD3-207ENST00000560549 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
TMOD3-207ENST00000560549 ETNK1Q9HBU6 452 aa7.69□□□□□ -1.18
TMOD3-207ENST00000560549 SCNN1DP51172 638 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 XAGE2Q96GT9 111 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
TMOD3-207ENST00000560549 SLURP2P0DP57 97 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 HDGFL1Q5TGJ6 251 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 CNKSR1Q969H4 720 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 CNTNAP3BQ96NU0 1288 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 NLRP3Q96P20 1036 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 CNTNAP3Q9BZ76 1288 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 FHDC1Q9C0D6 1143 aaPredicted RBP7.68□□□□□ -1.18
TMOD3-207ENST00000560549 DYRK1BQ9Y463 629 aa7.68□□□□□ -1.18
TMOD3-207ENST00000560549 SKIP12755 728 aa7.67□□□□□ -1.18
TMOD3-207ENST00000560549 NBPF10Q6P3W6 841 aaKnown RBP7.67□□□□□ -1.18
TMOD3-207ENST00000560549 TBC1D9Q6ZT07 1266 aa7.67□□□□□ -1.18
TMOD3-207ENST00000560549 DEPDC4Q8N2C3 294 aa7.67□□□□□ -1.18
TMOD3-207ENST00000560549 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
TMOD3-207ENST00000560549 USP4Q13107 963 aa7.66□□□□□ -1.18
TMOD3-207ENST00000560549 NCOA4Q13772 614 aa7.66□□□□□ -1.18
TMOD3-207ENST00000560549 MAP7D1Q3KQU3 841 aa7.66□□□□□ -1.18
TMOD3-207ENST00000560549 TRIM22Q8IYM9 498 aa7.66□□□□□ -1.18
TMOD3-207ENST00000560549 ZNF837Q96EG3 531 aaPredicted RBP7.66□□□□□ -1.18
TMOD3-207ENST00000560549 CDC14CA4D256 554 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 A6NJR5 290 aa7.65□□□□□ -1.18
TMOD3-207ENST00000560549 TMEM229AB2RXF0 380 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms