RNA–Protein interactions for RNA: ENST00000560511.5

CHRNB4-205, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 3

Gene CHRNB4, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-205ENST00000560511 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
CHRNB4-205ENST00000560511 NME9Q86XW9 330 aa11.83□□□□□ -0.52
CHRNB4-205ENST00000560511 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
CHRNB4-205ENST00000560511 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
CHRNB4-205ENST00000560511 BCL9O00512 1426 aa11.83□□□□□ -0.52
CHRNB4-205ENST00000560511 MON2Q7Z3U7 1717 aa11.83□□□□□ -0.52
CHRNB4-205ENST00000560511 NLRP2Q9NX02 1062 aa11.82□□□□□ -0.52
CHRNB4-205ENST00000560511 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
CHRNB4-205ENST00000560511 POLD1P28340 1107 aa11.81□□□□□ -0.52
CHRNB4-205ENST00000560511 COL18A1P39060 1754 aa11.81□□□□□ -0.52
CHRNB4-205ENST00000560511 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
CHRNB4-205ENST00000560511 USP31Q70CQ4 1352 aa11.8□□□□□ -0.52
CHRNB4-205ENST00000560511 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
CHRNB4-205ENST00000560511 RGPD5Q99666 1765 aa11.8□□□□□ -0.52
CHRNB4-205ENST00000560511 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
CHRNB4-205ENST00000560511 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
CHRNB4-205ENST00000560511 NFAT5O94916 1531 aa11.79□□□□□ -0.52
CHRNB4-205ENST00000560511 ANKRD36BQ8N2N9 1353 aa11.79□□□□□ -0.52
CHRNB4-205ENST00000560511 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
CHRNB4-205ENST00000560511 TNS2Q63HR2 1409 aa11.78□□□□□ -0.52
CHRNB4-205ENST00000560511 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
CHRNB4-205ENST00000560511 CDCA8Q53HL2 280 aa11.78□□□□□ -0.52
CHRNB4-205ENST00000560511 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
CHRNB4-205ENST00000560511 IL2RBP14784 551 aa11.77□□□□□ -0.53
CHRNB4-205ENST00000560511 SLC16A10Q8TF71 515 aa11.77□□□□□ -0.53
CHRNB4-205ENST00000560511 TFCP2L1Q9NZI6 479 aa11.77□□□□□ -0.53
CHRNB4-205ENST00000560511 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
CHRNB4-205ENST00000560511 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
CHRNB4-205ENST00000560511 DDX54Q8TDD1 881 aaKnown RBP11.76□□□□□ -0.53
CHRNB4-205ENST00000560511 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
CHRNB4-205ENST00000560511 KCNQ4P56696 695 aa11.75□□□□□ -0.53
CHRNB4-205ENST00000560511 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
CHRNB4-205ENST00000560511 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
CHRNB4-205ENST00000560511 BTAF1O14981 1849 aa11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 ANKRD24Q8TF21 1146 aa11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 COG3Q96JB2 828 aa11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 POLR3GLQ9BT43 218 aa11.74□□□□□ -0.53
CHRNB4-205ENST00000560511 ABCC6O95255 1503 aa11.73□□□□□ -0.53
CHRNB4-205ENST00000560511 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
CHRNB4-205ENST00000560511 ERBB3P21860 1342 aa11.73□□□□□ -0.53
CHRNB4-205ENST00000560511 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
CHRNB4-205ENST00000560511 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
CHRNB4-205ENST00000560511 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHRNB4-205ENST00000560511 LTV1Q96GA3 475 aaPredicted RBP11.72□□□□□ -0.53
CHRNB4-205ENST00000560511 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
CHRNB4-205ENST00000560511 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.53
CHRNB4-205ENST00000560511 ZNF526Q8TF50 670 aaPredicted RBP11.71□□□□□ -0.53
CHRNB4-205ENST00000560511 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 FYB1O15117 783 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 FBLN1P23142 703 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 GPBP1L1Q9HC44 474 aaPredicted RBP11.7□□□□□ -0.54
CHRNB4-205ENST00000560511 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
CHRNB4-205ENST00000560511 AMPHP49418 695 aa11.69□□□□□ -0.54
CHRNB4-205ENST00000560511 IP6K1Q92551 441 aa11.69□□□□□ -0.54
CHRNB4-205ENST00000560511 LTN1O94822 1766 aa11.69□□□□□ -0.54
CHRNB4-205ENST00000560511 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
CHRNB4-205ENST00000560511 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
CHRNB4-205ENST00000560511 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
CHRNB4-205ENST00000560511 HOXC9P31274 260 aa11.67□□□□□ -0.54
CHRNB4-205ENST00000560511 COL23A1Q86Y22 540 aaPredicted RBP11.67□□□□□ -0.54
CHRNB4-205ENST00000560511 HSPA6P17066 643 aa11.66□□□□□ -0.54
CHRNB4-205ENST00000560511 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.54
CHRNB4-205ENST00000560511 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
CHRNB4-205ENST00000560511 QSER1Q2KHR3 1735 aa11.65□□□□□ -0.54
CHRNB4-205ENST00000560511 RTL1A6NKG5 1358 aa11.65□□□□□ -0.55
CHRNB4-205ENST00000560511 CGNL1Q0VF96 1302 aa11.64□□□□□ -0.55
CHRNB4-205ENST00000560511 KIF20BQ96Q89 1820 aa11.64□□□□□ -0.55
CHRNB4-205ENST00000560511 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
CHRNB4-205ENST00000560511 PANK3Q9H999 370 aa11.63□□□□□ -0.55
CHRNB4-205ENST00000560511 CD2APQ9Y5K6 639 aa11.63□□□□□ -0.55
CHRNB4-205ENST00000560511 HSP90AB2PQ58FF8 381 aa11.62□□□□□ -0.55
CHRNB4-205ENST00000560511 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
CHRNB4-205ENST00000560511 COL24A1Q17RW2 1714 aa11.62□□□□□ -0.55
CHRNB4-205ENST00000560511 SMG6Q86US8 1419 aaKnown RBP11.61□□□□□ -0.55
CHRNB4-205ENST00000560511 PPM1GO15355 546 aaPredicted RBP11.61□□□□□ -0.55
CHRNB4-205ENST00000560511 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
CHRNB4-205ENST00000560511 FLT4P35916 1363 aa11.61□□□□□ -0.55
CHRNB4-205ENST00000560511 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 FAM208AQ9UK61 1670 aaKnown RBP11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 NSD2O96028 1365 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 INSRP06213 1382 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 KIF24Q5T7B8 1368 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 TNNT2P45379 298 aaPredicted RBP11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 NBPF6Q5VWK0 638 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 NBPF4Q96M43 638 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
CHRNB4-205ENST00000560511 LY75O60449 1722 aa11.59□□□□□ -0.55
CHRNB4-205ENST00000560511 IGSF1Q8N6C5 1336 aa11.59□□□□□ -0.55
CHRNB4-205ENST00000560511 PHF14O94880 888 aa11.58□□□□□ -0.56
CHRNB4-205ENST00000560511 HMGB2P26583 209 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms