RNA–Protein interactions for RNA: ENST00000560273.2

TUBBP8-201, Transcript of tubulin beta class I pseudogene 8, humanhuman

BASIC

Gene TUBBP8, Length 1,232 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP8-201ENST00000560273 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
TUBBP8-201ENST00000560273 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
TUBBP8-201ENST00000560273 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
TUBBP8-201ENST00000560273 DISP2A7MBM2 1401 aa12.61□□□□□ -0.39
TUBBP8-201ENST00000560273 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 HMOX1P09601 288 aa12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 DDX54Q8TDD1 881 aaKnown RBP12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 SPG7Q9UQ90 795 aa12.6□□□□□ -0.39
TUBBP8-201ENST00000560273 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
TUBBP8-201ENST00000560273 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
TUBBP8-201ENST00000560273 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
TUBBP8-201ENST00000560273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.39
TUBBP8-201ENST00000560273 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
TUBBP8-201ENST00000560273 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.4
TUBBP8-201ENST00000560273 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
TUBBP8-201ENST00000560273 AMOTQ4VCS5 1084 aa12.57□□□□□ -0.4
TUBBP8-201ENST00000560273 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
TUBBP8-201ENST00000560273 COL3A1P02461 1466 aaPredicted RBP12.57□□□□□ -0.4
TUBBP8-201ENST00000560273 MEGF6O75095 1541 aa12.57□□□□□ -0.4
TUBBP8-201ENST00000560273 KDRP35968 1356 aa12.56□□□□□ -0.4
TUBBP8-201ENST00000560273 OVOS2A0A0G2JMS6 1433 aa12.56□□□□□ -0.4
TUBBP8-201ENST00000560273 FCHSD2O94868 740 aa12.56□□□□□ -0.4
TUBBP8-201ENST00000560273 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
TUBBP8-201ENST00000560273 PCDH11XQ9BZA7 1347 aa12.56□□□□□ -0.4
TUBBP8-201ENST00000560273 PCDH11YQ9BZA8 1340 aa12.56□□□□□ -0.4
TUBBP8-201ENST00000560273 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
TUBBP8-201ENST00000560273 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
TUBBP8-201ENST00000560273 THSD7AQ9UPZ6 1657 aa12.55□□□□□ -0.4
TUBBP8-201ENST00000560273 ZBTB22O15209 634 aa12.55□□□□□ -0.4
TUBBP8-201ENST00000560273 WDR43Q15061 677 aaKnown RBP eCLIP12.55□□□□□ -0.4
TUBBP8-201ENST00000560273 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
TUBBP8-201ENST00000560273 NEFMP07197 916 aa12.54□□□□□ -0.4
TUBBP8-201ENST00000560273 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
TUBBP8-201ENST00000560273 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
TUBBP8-201ENST00000560273 RSPH6AQ9H0K4 717 aa12.54□□□□□ -0.4
TUBBP8-201ENST00000560273 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
TUBBP8-201ENST00000560273 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
TUBBP8-201ENST00000560273 CYP27B1O15528 508 aa12.53□□□□□ -0.4
TUBBP8-201ENST00000560273 SF3B2Q13435 895 aaKnown RBP12.53□□□□□ -0.4
TUBBP8-201ENST00000560273 C1orf141Q5JVX7 400 aa12.53□□□□□ -0.4
TUBBP8-201ENST00000560273 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
TUBBP8-201ENST00000560273 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
TUBBP8-201ENST00000560273 TRIM37O94972 964 aa12.52□□□□□ -0.41
TUBBP8-201ENST00000560273 HSP90AB1P08238 724 aaKnown RBP12.52□□□□□ -0.41
TUBBP8-201ENST00000560273 PHKG2P15735 406 aa12.52□□□□□ -0.41
TUBBP8-201ENST00000560273 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
TUBBP8-201ENST00000560273 CCDC184Q52MB2 194 aa12.52□□□□□ -0.41
TUBBP8-201ENST00000560273 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
TUBBP8-201ENST00000560273 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
TUBBP8-201ENST00000560273 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
TUBBP8-201ENST00000560273 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
TUBBP8-201ENST00000560273 NKX1-1Q15270 411 aaPredicted RBP12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 SYTL4Q96C24 671 aaPredicted RBP12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 BCL9O00512 1426 aa12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 PARP4Q9UKK3 1724 aaKnown RBP12.5□□□□□ -0.41
TUBBP8-201ENST00000560273 RGPD2P0DJD1 1756 aa12.49□□□□□ -0.41
TUBBP8-201ENST00000560273 LRRC37A3O60309 1634 aa12.49□□□□□ -0.41
TUBBP8-201ENST00000560273 KCNQ2O43526 872 aa12.49□□□□□ -0.41
TUBBP8-201ENST00000560273 APBA3O96018 575 aa12.49□□□□□ -0.41
TUBBP8-201ENST00000560273 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
TUBBP8-201ENST00000560273 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
TUBBP8-201ENST00000560273 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
TUBBP8-201ENST00000560273 MPRIPQ6WCQ1 1025 aa12.48□□□□□ -0.41
TUBBP8-201ENST00000560273 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
TUBBP8-201ENST00000560273 PLEKHF1Q96S99 279 aa12.48□□□□□ -0.41
TUBBP8-201ENST00000560273 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
TUBBP8-201ENST00000560273 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
TUBBP8-201ENST00000560273 BAG6P46379 1132 aa12.47□□□□□ -0.41
TUBBP8-201ENST00000560273 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
TUBBP8-201ENST00000560273 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.41
TUBBP8-201ENST00000560273 CCER2I3L3R5 266 aa12.46□□□□□ -0.41
TUBBP8-201ENST00000560273 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
TUBBP8-201ENST00000560273 RTF1Q92541 710 aaKnown RBP12.46□□□□□ -0.41
TUBBP8-201ENST00000560273 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
TUBBP8-201ENST00000560273 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.42
TUBBP8-201ENST00000560273 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.42
TUBBP8-201ENST00000560273 CABP4P57796 275 aa12.45□□□□□ -0.42
TUBBP8-201ENST00000560273 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
TUBBP8-201ENST00000560273 MIER1Q8N108 512 aa12.45□□□□□ -0.42
TUBBP8-201ENST00000560273 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
TUBBP8-201ENST00000560273 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
TUBBP8-201ENST00000560273 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
TUBBP8-201ENST00000560273 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
TUBBP8-201ENST00000560273 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
TUBBP8-201ENST00000560273 LGR6Q9HBX8 967 aa12.44□□□□□ -0.42
TUBBP8-201ENST00000560273 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 PLSCR1O15162 318 aa12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 RIPK4P57078 832 aa12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 PIGBQ92521 554 aa12.43□□□□□ -0.42
TUBBP8-201ENST00000560273 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms