RNA–Protein interactions for RNA: ENST00000560245.5

MEIS3-207, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MEIS3, Length 1,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-207ENST00000560245 BCL9O00512 1426 aa20.27■□□□□ 0.84
MEIS3-207ENST00000560245 ZCRB1Q8TBF4 217 aaKnown RBP20.27■□□□□ 0.84
MEIS3-207ENST00000560245 EP400Q96L91 3159 aa20.27■□□□□ 0.84
MEIS3-207ENST00000560245 FAM196AQ6ZSG2 479 aa20.26■□□□□ 0.83
MEIS3-207ENST00000560245 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
MEIS3-207ENST00000560245 TNS1Q9HBL0 1735 aaKnown RBP20.25■□□□□ 0.83
MEIS3-207ENST00000560245 MARCH10Q8NA82 808 aaPredicted RBP20.25■□□□□ 0.83
MEIS3-207ENST00000560245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.25■□□□□ 0.83
MEIS3-207ENST00000560245 SULT6B1Q6IMI4 303 aa20.24■□□□□ 0.83
MEIS3-207ENST00000560245 PCDH11XQ9BZA7 1347 aa20.24■□□□□ 0.83
MEIS3-207ENST00000560245 PCDH11YQ9BZA8 1340 aa20.24■□□□□ 0.83
MEIS3-207ENST00000560245 NHSQ6T4R5 1651 aa20.23■□□□□ 0.83
MEIS3-207ENST00000560245 FAM182BQ5T319 152 aa20.23■□□□□ 0.83
MEIS3-207ENST00000560245 SPG7Q9UQ90 795 aa20.23■□□□□ 0.83
MEIS3-207ENST00000560245 DOT1LQ8TEK3 1739 aa20.22■□□□□ 0.83
MEIS3-207ENST00000560245 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
MEIS3-207ENST00000560245 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
MEIS3-207ENST00000560245 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
MEIS3-207ENST00000560245 UPF1Q92900 1129 aaKnown RBP eCLIP20.22■□□□□ 0.83
MEIS3-207ENST00000560245 ANP32CO43423 234 aa20.21■□□□□ 0.83
MEIS3-207ENST00000560245 AMOTQ4VCS5 1084 aa20.2■□□□□ 0.82
MEIS3-207ENST00000560245 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
MEIS3-207ENST00000560245 HMOX1P09601 288 aa20.19■□□□□ 0.82
MEIS3-207ENST00000560245 VIRMAQ69YN4 1812 aaKnown RBP20.18■□□□□ 0.82
MEIS3-207ENST00000560245 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
MEIS3-207ENST00000560245 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
MEIS3-207ENST00000560245 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
MEIS3-207ENST00000560245 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
MEIS3-207ENST00000560245 U2AF1L5P0DN76 240 aaPredicted RBP20.17■□□□□ 0.82
MEIS3-207ENST00000560245 U2AF1Q01081 240 aaKnown RBP eCLIP20.17■□□□□ 0.82
MEIS3-207ENST00000560245 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
MEIS3-207ENST00000560245 ITGB4P16144 1822 aa20.16■□□□□ 0.82
MEIS3-207ENST00000560245 BTAF1O14981 1849 aa20.16■□□□□ 0.82
MEIS3-207ENST00000560245 CYP27B1O15528 508 aa20.15■□□□□ 0.82
MEIS3-207ENST00000560245 FCHSD2O94868 740 aa20.15■□□□□ 0.82
MEIS3-207ENST00000560245 SF3B2Q13435 895 aaKnown RBP20.15■□□□□ 0.82
MEIS3-207ENST00000560245 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
MEIS3-207ENST00000560245 RSPH6AQ9H0K4 717 aa20.15■□□□□ 0.82
MEIS3-207ENST00000560245 SCN11AQ9UI33 1791 aa20.14■□□□□ 0.81
MEIS3-207ENST00000560245 TRIM37O94972 964 aa20.14■□□□□ 0.81
MEIS3-207ENST00000560245 PHKG2P15735 406 aa20.13■□□□□ 0.81
MEIS3-207ENST00000560245 NKX1-1Q15270 411 aaPredicted RBP20.13■□□□□ 0.81
MEIS3-207ENST00000560245 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
MEIS3-207ENST00000560245 BCL11BQ9C0K0 894 aaPredicted RBP20.12■□□□□ 0.81
MEIS3-207ENST00000560245 ADAMTS7Q9UKP4 1686 aa20.11■□□□□ 0.81
MEIS3-207ENST00000560245 HSP90AB1P08238 724 aaKnown RBP20.11■□□□□ 0.81
MEIS3-207ENST00000560245 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
MEIS3-207ENST00000560245 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
MEIS3-207ENST00000560245 PNNQ9H307 717 aaKnown RBP20.11■□□□□ 0.81
MEIS3-207ENST00000560245 BAG6P46379 1132 aa20.09■□□□□ 0.81
MEIS3-207ENST00000560245 DLG5Q8TDM6 1919 aa20.09■□□□□ 0.81
MEIS3-207ENST00000560245 RREB1Q92766 1687 aa20.08■□□□□ 0.81
MEIS3-207ENST00000560245 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
MEIS3-207ENST00000560245 MTHFSDQ2M296 383 aaKnown RBP20.08■□□□□ 0.81
MEIS3-207ENST00000560245 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
MEIS3-207ENST00000560245 GAS2L2Q8NHY3 880 aa20.08■□□□□ 0.81
MEIS3-207ENST00000560245 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.81
MEIS3-207ENST00000560245 KCNQ2O43526 872 aa20.07■□□□□ 0.8
MEIS3-207ENST00000560245 NEFMP07197 916 aa20.07■□□□□ 0.8
MEIS3-207ENST00000560245 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
MEIS3-207ENST00000560245 KDM6AO15550 1401 aaPredicted RBP20.06■□□□□ 0.8
MEIS3-207ENST00000560245 LY75O60449 1722 aa20.06■□□□□ 0.8
MEIS3-207ENST00000560245 APBA3O96018 575 aa20.06■□□□□ 0.8
MEIS3-207ENST00000560245 PRIM1P49642 420 aaKnown RBP20.06■□□□□ 0.8
MEIS3-207ENST00000560245 PHACTR3Q96KR7 559 aa20.05■□□□□ 0.8
MEIS3-207ENST00000560245 PLEKHF1Q96S99 279 aa20.05■□□□□ 0.8
MEIS3-207ENST00000560245 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
MEIS3-207ENST00000560245 PLSCR1O15162 318 aa20.04■□□□□ 0.8
MEIS3-207ENST00000560245 PTF1AQ7RTS3 328 aa20.04■□□□□ 0.8
MEIS3-207ENST00000560245 SYTL4Q96C24 671 aaPredicted RBP20.04■□□□□ 0.8
MEIS3-207ENST00000560245 MRC1P22897 1456 aa20.04■□□□□ 0.8
MEIS3-207ENST00000560245 ERVV-2B6SEH9 535 aa20.03■□□□□ 0.8
MEIS3-207ENST00000560245 MRS2Q9HD23 443 aa20.03■□□□□ 0.8
MEIS3-207ENST00000560245 SIPA1L3O60292 1781 aaPredicted RBP20.03■□□□□ 0.8
MEIS3-207ENST00000560245 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
MEIS3-207ENST00000560245 NUP188Q5SRE5 1749 aa20.02■□□□□ 0.8
MEIS3-207ENST00000560245 CCDC184Q52MB2 194 aa20.02■□□□□ 0.8
MEIS3-207ENST00000560245 DIEXFQ68CQ4 756 aaKnown RBP20.02■□□□□ 0.8
MEIS3-207ENST00000560245 DEFB132Q7Z7B7 95 aa20.02■□□□□ 0.8
MEIS3-207ENST00000560245 GNAT3A8MTJ3 354 aa20.01■□□□□ 0.79
MEIS3-207ENST00000560245 ADAMTS8Q9UP79 889 aa20.01■□□□□ 0.79
MEIS3-207ENST00000560245 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
MEIS3-207ENST00000560245 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
MEIS3-207ENST00000560245 CAMKK2Q96RR4 588 aa20■□□□□ 0.79
MEIS3-207ENST00000560245 TMOD3Q9NYL9 352 aa20■□□□□ 0.79
MEIS3-207ENST00000560245 PAPPAQ13219 1627 aa19.98■□□□□ 0.79
MEIS3-207ENST00000560245 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
MEIS3-207ENST00000560245 HTATSF1O43719 755 aaKnown RBP19.98■□□□□ 0.79
MEIS3-207ENST00000560245 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
MEIS3-207ENST00000560245 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
MEIS3-207ENST00000560245 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
MEIS3-207ENST00000560245 CABP4P57796 275 aa19.97■□□□□ 0.79
MEIS3-207ENST00000560245 NFE2L2Q16236 605 aa19.97■□□□□ 0.79
MEIS3-207ENST00000560245 PIGBQ92521 554 aa19.97■□□□□ 0.79
MEIS3-207ENST00000560245 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
MEIS3-207ENST00000560245 EZH2Q15910 746 aaKnown RBP19.96■□□□□ 0.79
MEIS3-207ENST00000560245 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
MEIS3-207ENST00000560245 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
MEIS3-207ENST00000560245 SMARCC1Q92922 1105 aaPredicted RBP19.95■□□□□ 0.78
MEIS3-207ENST00000560245 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms