RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
ZEB1-218ENST00000560196 DCTN1Q14203 1278 aa18.68■□□□□ 0.58
ZEB1-218ENST00000560196 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
ZEB1-218ENST00000560196 MBIPQ9NS73 344 aa18.68■□□□□ 0.58
ZEB1-218ENST00000560196 PDE3AQ14432 1141 aa18.67■□□□□ 0.58
ZEB1-218ENST00000560196 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
ZEB1-218ENST00000560196 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
ZEB1-218ENST00000560196 ALDH1L2Q3SY69 923 aa18.66■□□□□ 0.58
ZEB1-218ENST00000560196 MCM10Q7L590 875 aa18.66■□□□□ 0.58
ZEB1-218ENST00000560196 LAS1LQ9Y4W2 734 aaKnown RBP18.66■□□□□ 0.58
ZEB1-218ENST00000560196 COL22A1Q8NFW1 1626 aaPredicted RBP18.65■□□□□ 0.58
ZEB1-218ENST00000560196 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
ZEB1-218ENST00000560196 EXOC6Q8TAG9 804 aa18.65■□□□□ 0.58
ZEB1-218ENST00000560196 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
ZEB1-218ENST00000560196 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
ZEB1-218ENST00000560196 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
ZEB1-218ENST00000560196 TOM1O60784 492 aa18.63■□□□□ 0.57
ZEB1-218ENST00000560196 VAMP4O75379 141 aa18.63■□□□□ 0.57
ZEB1-218ENST00000560196 HAP1P54257 671 aaPredicted RBP18.63■□□□□ 0.57
ZEB1-218ENST00000560196 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
ZEB1-218ENST00000560196 C20orf194Q5TEA3 1177 aa18.63■□□□□ 0.57
ZEB1-218ENST00000560196 PELP1Q8IZL8 1130 aaKnown RBP18.63■□□□□ 0.57
ZEB1-218ENST00000560196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.571e-11■■■■■ 28.4
ZEB1-218ENST00000560196 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
ZEB1-218ENST00000560196 OVOS2A0A0G2JMS6 1433 aa18.63■□□□□ 0.57
ZEB1-218ENST00000560196 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
ZEB1-218ENST00000560196 MS4A1P11836 297 aa18.61■□□□□ 0.57
ZEB1-218ENST00000560196 IL17REQ8NFR9 667 aa18.61■□□□□ 0.57
ZEB1-218ENST00000560196 SSH1Q8WYL5 1049 aa18.61■□□□□ 0.57
ZEB1-218ENST00000560196 COL5A2P05997 1499 aaPredicted RBP18.6■□□□□ 0.57
ZEB1-218ENST00000560196 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
ZEB1-218ENST00000560196 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
ZEB1-218ENST00000560196 ZNF530Q6P9A1 599 aaPredicted RBP18.6■□□□□ 0.57
ZEB1-218ENST00000560196 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
ZEB1-218ENST00000560196 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
ZEB1-218ENST00000560196 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
ZEB1-218ENST00000560196 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
ZEB1-218ENST00000560196 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
ZEB1-218ENST00000560196 TWISTNBQ3B726 338 aaPredicted RBP18.59■□□□□ 0.57
ZEB1-218ENST00000560196 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
ZEB1-218ENST00000560196 SOS1Q07889 1333 aaPredicted RBP18.58■□□□□ 0.57
ZEB1-218ENST00000560196 AAMPQ13685 434 aa18.58■□□□□ 0.56
ZEB1-218ENST00000560196 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.56
ZEB1-218ENST00000560196 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
ZEB1-218ENST00000560196 B4GALNT3Q6L9W6 998 aa18.58■□□□□ 0.56
ZEB1-218ENST00000560196 TSPYL6Q8N831 410 aa18.58■□□□□ 0.56
ZEB1-218ENST00000560196 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
ZEB1-218ENST00000560196 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.56
ZEB1-218ENST00000560196 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
ZEB1-218ENST00000560196 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
ZEB1-218ENST00000560196 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
ZEB1-218ENST00000560196 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
ZEB1-218ENST00000560196 TSPYL4Q9UJ04 414 aa18.57■□□□□ 0.56
ZEB1-218ENST00000560196 FRAT1Q92837 279 aaPredicted RBP18.56■□□□□ 0.56
ZEB1-218ENST00000560196 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
ZEB1-218ENST00000560196 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
ZEB1-218ENST00000560196 PHLPP1O60346 1717 aa18.56■□□□□ 0.56
ZEB1-218ENST00000560196 MEGF6O75095 1541 aa18.55■□□□□ 0.56
ZEB1-218ENST00000560196 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
ZEB1-218ENST00000560196 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
ZEB1-218ENST00000560196 COL14A1Q05707 1796 aaKnown RBP18.55■□□□□ 0.56
ZEB1-218ENST00000560196 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
ZEB1-218ENST00000560196 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
ZEB1-218ENST00000560196 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
ZEB1-218ENST00000560196 TOM1L2Q6ZVM7 507 aa18.52■□□□□ 0.56
ZEB1-218ENST00000560196 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
ZEB1-218ENST00000560196 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
ZEB1-218ENST00000560196 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
ZEB1-218ENST00000560196 RLBP1P12271 317 aa18.51■□□□□ 0.55
ZEB1-218ENST00000560196 TRIM27P14373 513 aa18.51■□□□□ 0.55
ZEB1-218ENST00000560196 PANK1Q8TE04 598 aa18.51■□□□□ 0.55
ZEB1-218ENST00000560196 PARP4Q9UKK3 1724 aaKnown RBP18.51■□□□□ 0.55
ZEB1-218ENST00000560196 UBAP1LF5GYI3 381 aa18.5■□□□□ 0.55
ZEB1-218ENST00000560196 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
ZEB1-218ENST00000560196 PHKG2P15735 406 aa18.5■□□□□ 0.55
ZEB1-218ENST00000560196 TEFQ10587 303 aa18.5■□□□□ 0.55
ZEB1-218ENST00000560196 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
ZEB1-218ENST00000560196 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
ZEB1-218ENST00000560196 HSP90AB1P08238 724 aaKnown RBP18.49■□□□□ 0.55
ZEB1-218ENST00000560196 EVA1CP58658 441 aa18.49■□□□□ 0.55
ZEB1-218ENST00000560196 MVPQ14764 893 aaKnown RBP18.49■□□□□ 0.55
ZEB1-218ENST00000560196 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
ZEB1-218ENST00000560196 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
ZEB1-218ENST00000560196 COG6Q9Y2V7 657 aa18.49■□□□□ 0.55
ZEB1-218ENST00000560196 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
ZEB1-218ENST00000560196 HOXB7P09629 217 aa18.48■□□□□ 0.55
ZEB1-218ENST00000560196 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
ZEB1-218ENST00000560196 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
ZEB1-218ENST00000560196 TNNQ9UQP3 1299 aa18.48■□□□□ 0.55
ZEB1-218ENST00000560196 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
ZEB1-218ENST00000560196 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
ZEB1-218ENST00000560196 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
ZEB1-218ENST00000560196 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
ZEB1-218ENST00000560196 MRC1P22897 1456 aa18.46■□□□□ 0.55
ZEB1-218ENST00000560196 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
ZEB1-218ENST00000560196 IL2RBP14784 551 aa18.46■□□□□ 0.55
ZEB1-218ENST00000560196 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
ZEB1-218ENST00000560196 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
ZEB1-218ENST00000560196 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
ZEB1-218ENST00000560196 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms