RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-222	ENST00000560131	STK32A	Q8WU08	396 aa		7.39	□□□□□ -1.23
TPM1-222	ENST00000560131	ZNF592	Q92610	1267 aa		7.39	□□□□□ -1.23
TPM1-222	ENST00000560131	HPS1	Q92902	700 aa		7.39	□□□□□ -1.23
TPM1-222	ENST00000560131		H3BM21	787 aa		7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	LZTS3	O60299	673 aa	Predicted RBP	7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	F12	P00748	615 aa	Predicted RBP	7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	MCCD1	P59942	119 aa	Predicted RBP	7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	PHLDB3	Q6NSJ2	640 aa		7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	RNF19B	Q6ZMZ0	732 aa		7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	YTHDC1	Q96MU7	727 aa	Known RBP	7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	MKRN1	Q9UHC7	482 aa	Known RBP	7.38	□□□□□ -1.23
TPM1-222	ENST00000560131	TOP2A	P11388	1531 aa	Known RBP	7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	SSFA2	P28290	1259 aa		7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	LARP1	Q6PKG0	1096 aa	Known RBP	7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	CEP126	Q9P2H0	1117 aa		7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	GPSM3	Q9Y4H4	160 aa		7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	WIZ	O95785	1651 aa		7.37	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L15	C9J2P7	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L10	C9JJH3	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L13	C9JLJ4	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L12	C9JPN9	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L11	C9JVI0	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L21	D6R901	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L18	D6R9N7	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L22	D6RA61	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L17	D6RBQ6	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L19	D6RCP7	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L20	D6RJB6	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	ATP5J2-PTCD1	G3V325	749 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	VEGFB	P49765	207 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	USP17L24	Q0WX57	530 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	PTK7	Q13308	1070 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	PTPRN	Q16849	979 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	SLFNL1	Q499Z3	407 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	FAM174A	Q8TBP5	190 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	FAM200A	Q8TCP9	573 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	MRGPRX2	Q96LB1	330 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	CUX2	O14529	1486 aa		7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	BAZ1B	Q9UIG0	1483 aa	Known RBP	7.36	□□□□□ -1.23
TPM1-222	ENST00000560131	ERBB4	Q15303	1308 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	FMNL1	O95466	1100 aa	Predicted RBP	7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	JUND	P17535	347 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	ERCC3	P19447	782 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	RASA1	P20936	1047 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	PTK2	Q05397	1052 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	CRTC2	Q53ET0	693 aa	Predicted RBP	7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	DEPDC4	Q8N2C3	294 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	PHTF2	Q8N3S3	785 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	TMEM151A	Q8N4L1	468 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	ARMC2	Q8NEN0	867 aa		7.35	□□□□□ -1.23
TPM1-222	ENST00000560131	RBM47	A0AV96	593 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	CTH	P32929	405 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	GSK3A	P49840	483 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	FAM69C	Q0P6D2	419 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	PDXDC2P	Q6P474	469 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	FAM160A2	Q8N612	972 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	CLP1	Q92989	425 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	THAP11	Q96EK4	314 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	MAP10	Q9P2G4	905 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	CECR2	Q9BXF3	1484 aa		7.34	□□□□□ -1.23
TPM1-222	ENST00000560131	CCDC88B	A6NC98	1476 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	CEP164	Q9UPV0	1460 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	NCOA4	Q13772	614 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	RNF135	Q8IUD6	432 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	ANKMY2	Q8IV38	441 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	SLAIN2	Q9P270	581 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	VPS8	Q8N3P4	1428 aa		7.33	□□□□□ -1.24
TPM1-222	ENST00000560131	IGSF3	O75054	1194 aa		7.32	□□□□□ -1.24
TPM1-222	ENST00000560131	MAP7D1	Q3KQU3	841 aa		7.32	□□□□□ -1.24
TPM1-222	ENST00000560131	PLPP7	Q8NBV4	271 aa		7.32	□□□□□ -1.24
TPM1-222	ENST00000560131	EVA1B	Q9NVM1	165 aa		7.32	□□□□□ -1.24
TPM1-222	ENST00000560131	CHIC2	Q9UKJ5	165 aa		7.32	□□□□□ -1.24
TPM1-222	ENST00000560131	SMARCA2	P51531	1590 aa		7.31	□□□□□ -1.24
TPM1-222	ENST00000560131	TRIM32	Q13049	653 aa		7.31	□□□□□ -1.24
TPM1-222	ENST00000560131	PCDHB9	Q9Y5E1	797 aa		7.31	□□□□□ -1.24
TPM1-222	ENST00000560131	FANCI	Q9NVI1	1328 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	SOWAHD	A6NJG2	315 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	UNCX	A6NJT0	531 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	GDF11	O95390	407 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	ATP2B4	P23634	1241 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	KCNH2	Q12809	1159 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	SWI5	Q1ZZU3	235 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	EML3	Q32P44	896 aa		7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	DHX57	Q6P158	1386 aa	Known RBP	7.3	□□□□□ -1.24
TPM1-222	ENST00000560131	ABCC8	Q09428	1581 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	CCNYL3	P0C7X3	344 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	DPYD	Q12882	1025 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	MSS51	Q4VC12	460 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	TRIM50	Q86XT4	487 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	OGFOD1	Q8N543	542 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	OCSTAMP	Q9BR26	566 aa		7.29	□□□□□ -1.24
TPM1-222	ENST00000560131	ATP1A2	P50993	1020 aa		7.28	□□□□□ -1.24
TPM1-222	ENST00000560131	RASSF7	Q02833	373 aa		7.28	□□□□□ -1.24
TPM1-222	ENST00000560131	NBPF14	Q5TI25	921 aa		7.28	□□□□□ -1.24
TPM1-222	ENST00000560131	TRIM46	Q7Z4K8	759 aa		7.28	□□□□□ -1.24
TPM1-222	ENST00000560131	C1orf216	Q8TAB5	229 aa		7.28	□□□□□ -1.24
TPM1-222	ENST00000560131	SIRT1	Q96EB6	747 aa		7.28	□□□□□ -1.24

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