RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 SYT17Q9BSW7 474 aa24.29■■□□□ 1.48
CRTC3-208ENST00000560098 KAT6BQ8WYB5 2073 aa24.29■■□□□ 1.48
CRTC3-208ENST00000560098 AKT1S1Q96B36 256 aa24.28■■□□□ 1.48
CRTC3-208ENST00000560098 RGPD2P0DJD1 1756 aa24.28■■□□□ 1.48
CRTC3-208ENST00000560098 SMG6Q86US8 1419 aaKnown RBP24.27■■□□□ 1.48
CRTC3-208ENST00000560098 CGNL1Q0VF96 1302 aa24.26■■□□□ 1.47
CRTC3-208ENST00000560098 USHBP1Q8N6Y0 703 aa24.26■■□□□ 1.47
CRTC3-208ENST00000560098 ARXQ96QS3 562 aa24.26■■□□□ 1.47
CRTC3-208ENST00000560098 NSD2O96028 1365 aa24.25■■□□□ 1.47
CRTC3-208ENST00000560098 DOT1LQ8TEK3 1739 aa24.25■■□□□ 1.47
CRTC3-208ENST00000560098 SHANK3Q9BYB0 1731 aa24.25■■□□□ 1.47
CRTC3-208ENST00000560098 HSP90AB2PQ58FF8 381 aa24.25■■□□□ 1.47
CRTC3-208ENST00000560098 RAPGEF4Q8WZA2 1011 aa24.25■■□□□ 1.47
CRTC3-208ENST00000560098 INSRP06213 1382 aa24.24■■□□□ 1.47
CRTC3-208ENST00000560098 KIF24Q5T7B8 1368 aa24.23■■□□□ 1.47
CRTC3-208ENST00000560098 KCNQ4P56696 695 aa24.23■■□□□ 1.47
CRTC3-208ENST00000560098 SLC16A10Q8TF71 515 aa24.23■■□□□ 1.47
CRTC3-208ENST00000560098 TIMELESSQ9UNS1 1208 aa24.23■■□□□ 1.47
CRTC3-208ENST00000560098 FLT4P35916 1363 aa24.23■■□□□ 1.47
CRTC3-208ENST00000560098 KIF20BQ96Q89 1820 aa24.22■■□□□ 1.47
CRTC3-208ENST00000560098 TATP17735 454 aaPredicted RBP24.22■■□□□ 1.47
CRTC3-208ENST00000560098 CARD14Q9BXL6 1004 aa24.22■■□□□ 1.47
CRTC3-208ENST00000560098 TFCP2L1Q9NZI6 479 aa24.21■■□□□ 1.47
CRTC3-208ENST00000560098 UTRNP46939 3433 aa24.21■■□□□ 1.47
CRTC3-208ENST00000560098 PNPLA7Q6ZV29 1317 aa24.2■■□□□ 1.46
CRTC3-208ENST00000560098 MAP3K5Q99683 1374 aa24.19■■□□□ 1.46
CRTC3-208ENST00000560098 NSD3Q9BZ95 1437 aa24.19■■□□□ 1.46
CRTC3-208ENST00000560098 QSER1Q2KHR3 1735 aa24.19■■□□□ 1.46
CRTC3-208ENST00000560098 LY75O60449 1722 aa24.18■■□□□ 1.46
CRTC3-208ENST00000560098 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
CRTC3-208ENST00000560098 PCDH11XQ9BZA7 1347 aa24.17■■□□□ 1.46
CRTC3-208ENST00000560098 PCDH11YQ9BZA8 1340 aa24.17■■□□□ 1.46
CRTC3-208ENST00000560098 EMILIN1Q9Y6C2 1016 aa24.17■■□□□ 1.46
CRTC3-208ENST00000560098 POLD1P28340 1107 aa24.16■■□□□ 1.46
CRTC3-208ENST00000560098 CLSPNQ9HAW4 1339 aa24.14■■□□□ 1.46
CRTC3-208ENST00000560098 TUBGCP6Q96RT7 1819 aa24.12■■□□□ 1.45
CRTC3-208ENST00000560098 PPM1GO15355 546 aaPredicted RBP24.11■■□□□ 1.45
CRTC3-208ENST00000560098 CYP27B1O15528 508 aa24.11■■□□□ 1.45
CRTC3-208ENST00000560098 COL24A1Q17RW2 1714 aa24.11■■□□□ 1.45
CRTC3-208ENST00000560098 KLHL34Q8N239 644 aa24.1■■□□□ 1.45
CRTC3-208ENST00000560098 MPRIPQ6WCQ1 1025 aa24.1■■□□□ 1.45
CRTC3-208ENST00000560098 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
CRTC3-208ENST00000560098 WASHC2AQ641Q2 1341 aa24.08■■□□□ 1.45
CRTC3-208ENST00000560098 NCAPD2Q15021 1401 aa24.08■■□□□ 1.45
CRTC3-208ENST00000560098 MSH5O43196 834 aa24.08■■□□□ 1.44
CRTC3-208ENST00000560098 COL23A1Q86Y22 540 aaPredicted RBP24.08■■□□□ 1.44
CRTC3-208ENST00000560098 ZNF784Q8NCA9 323 aaPredicted RBP24.08■■□□□ 1.44
CRTC3-208ENST00000560098 PALLDQ8WX93 1383 aa24.08■■□□□ 1.44
CRTC3-208ENST00000560098 HMGB2P26583 209 aaKnown RBP24.07■■□□□ 1.44
CRTC3-208ENST00000560098 GPR162Q16538 588 aa24.07■■□□□ 1.44
CRTC3-208ENST00000560098 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
CRTC3-208ENST00000560098 ANKRD26Q9UPS8 1709 aa24.06■■□□□ 1.44
CRTC3-208ENST00000560098 PKD1L3Q7Z443 1732 aa24.05■■□□□ 1.44
CRTC3-208ENST00000560098 SPG7Q9UQ90 795 aa24.05■■□□□ 1.44
CRTC3-208ENST00000560098 SMARCC1Q92922 1105 aaPredicted RBP24.04■■□□□ 1.44
CRTC3-208ENST00000560098 EYA1Q99502 592 aa24.04■■□□□ 1.44
CRTC3-208ENST00000560098 POLKQ9UBT6 870 aa24.04■■□□□ 1.44
CRTC3-208ENST00000560098 C5P01031 1676 aa24.03■■□□□ 1.44
CRTC3-208ENST00000560098 NKX1-1Q15270 411 aaPredicted RBP24.03■■□□□ 1.44
CRTC3-208ENST00000560098 TOGARAM1Q9Y4F4 1720 aa24.03■■□□□ 1.44
CRTC3-208ENST00000560098 NLGN2Q8NFZ4 835 aa24.02■■□□□ 1.44
CRTC3-208ENST00000560098 FLAD1Q8NFF5 587 aa24.01■■□□□ 1.43
CRTC3-208ENST00000560098 PIGBQ92521 554 aa24.01■■□□□ 1.43
CRTC3-208ENST00000560098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.01■■□□□ 1.43
CRTC3-208ENST00000560098 GOLGB1Q14789 3259 aaKnown RBP24.01■■□□□ 1.43
CRTC3-208ENST00000560098 CHD4Q14839 1912 aa24■■□□□ 1.43
CRTC3-208ENST00000560098 MAP2P11137 1827 aaKnown RBP24■■□□□ 1.43
CRTC3-208ENST00000560098 MSL1Q68DK7 614 aa24■■□□□ 1.43
CRTC3-208ENST00000560098 PELP1Q8IZL8 1130 aaKnown RBP24■■□□□ 1.43
CRTC3-208ENST00000560098 TNNT2P45379 298 aaPredicted RBP23.99■■□□□ 1.43
CRTC3-208ENST00000560098 EIF4G2P78344 907 aaKnown RBP eCLIP23.99■■□□□ 1.43
CRTC3-208ENST00000560098 ITGB4P16144 1822 aa23.98■■□□□ 1.43
CRTC3-208ENST00000560098 TAF1LQ8IZX4 1826 aa23.97■■□□□ 1.43
CRTC3-208ENST00000560098 EIF4A2Q14240 407 aaKnown RBP23.97■■□□□ 1.43
CRTC3-208ENST00000560098 AK7Q96M32 723 aa23.97■■□□□ 1.43
CRTC3-208ENST00000560098 HSPA5P11021 654 aaKnown RBP23.96■■□□□ 1.43
CRTC3-208ENST00000560098 IFNL2Q8IZJ0 200 aa23.96■■□□□ 1.43
CRTC3-208ENST00000560098 C4BP0C0L5 1744 aa23.96■■□□□ 1.43
CRTC3-208ENST00000560098 PHKG2P15735 406 aa23.95■■□□□ 1.42
CRTC3-208ENST00000560098 TMOD3Q9NYL9 352 aa23.95■■□□□ 1.42
CRTC3-208ENST00000560098 PANK3Q9H999 370 aa23.94■■□□□ 1.42
CRTC3-208ENST00000560098 LOC102724428A0A0B4J2F2 783 aa23.93■■□□□ 1.42
CRTC3-208ENST00000560098 SIK1P57059 783 aa23.93■■□□□ 1.42
CRTC3-208ENST00000560098 PLEKHG2Q9H7P9 1386 aa23.93■■□□□ 1.42
CRTC3-208ENST00000560098 AMIGO3Q86WK7 504 aa23.93■■□□□ 1.42
CRTC3-208ENST00000560098 ASAP1Q9ULH1 1129 aa23.92■■□□□ 1.42
CRTC3-208ENST00000560098 CD2APQ9Y5K6 639 aa23.92■■□□□ 1.42
CRTC3-208ENST00000560098 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
CRTC3-208ENST00000560098 GRIN3BO60391 1043 aa23.91■■□□□ 1.42
CRTC3-208ENST00000560098 PHF14O94880 888 aa23.91■■□□□ 1.42
CRTC3-208ENST00000560098 YBX3P16989 372 aaKnown RBP eCLIP23.91■■□□□ 1.423e-7■■□□□ 12.8
CRTC3-208ENST00000560098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.9■■□□□ 1.42
CRTC3-208ENST00000560098 LINC00116Q8NCU8 138 aa23.9■■□□□ 1.42
CRTC3-208ENST00000560098 SSFA2P28290 1259 aa23.89■■□□□ 1.41
CRTC3-208ENST00000560098 SMIM5Q71RC9 77 aa23.89■■□□□ 1.41
CRTC3-208ENST00000560098 ATP6V1AP38606 617 aa23.87■■□□□ 1.41
CRTC3-208ENST00000560098 ITPK1Q13572 414 aa23.87■■□□□ 1.41
CRTC3-208ENST00000560098 CCER1Q8TC90 406 aaPredicted RBP23.87■■□□□ 1.41
CRTC3-208ENST00000560098 ATG3Q9NT62 314 aa23.87■■□□□ 1.41
CRTC3-208ENST00000560098 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms