RNA–Protein interactions for RNA: ENST00000560047.1

CRTC3-207, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-207ENST00000560047 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
CRTC3-207ENST00000560047 ESF1Q9H501 851 aaKnown RBP12.34□□□□□ -0.43
CRTC3-207ENST00000560047 LILRA1O75019 489 aa12.33□□□□□ -0.44
CRTC3-207ENST00000560047 TSGA10IPQ3SY00 556 aa12.33□□□□□ -0.44
CRTC3-207ENST00000560047 CYLDQ9NQC7 956 aa12.33□□□□□ -0.44
CRTC3-207ENST00000560047 DOLKQ9UPQ8 538 aa12.33□□□□□ -0.44
CRTC3-207ENST00000560047 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
CRTC3-207ENST00000560047 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
CRTC3-207ENST00000560047 CBLBQ13191 982 aa12.32□□□□□ -0.44
CRTC3-207ENST00000560047 Q6ZVU0 165 aa12.32□□□□□ -0.44
CRTC3-207ENST00000560047 SKIP12755 728 aa12.31□□□□□ -0.44
CRTC3-207ENST00000560047 ERVK-9P63128 1117 aa12.31□□□□□ -0.44
CRTC3-207ENST00000560047 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
CRTC3-207ENST00000560047 MEIOBQ8N635 442 aa12.31□□□□□ -0.44
CRTC3-207ENST00000560047 PLPP7Q8NBV4 271 aa12.31□□□□□ -0.44
CRTC3-207ENST00000560047 CDCA7Q9BWT1 371 aaPredicted RBP12.31□□□□□ -0.44
CRTC3-207ENST00000560047 DACH1Q9UI36 760 aa12.31□□□□□ -0.44
CRTC3-207ENST00000560047 UPP2O95045 317 aa12.3□□□□□ -0.44
CRTC3-207ENST00000560047 ADD1P35611 737 aaKnown RBP12.3□□□□□ -0.44
CRTC3-207ENST00000560047 USP4Q13107 963 aa12.3□□□□□ -0.44
CRTC3-207ENST00000560047 SIRT1Q96EB6 747 aa12.3□□□□□ -0.44
CRTC3-207ENST00000560047 ATP13A2Q9NQ11 1180 aa12.3□□□□□ -0.44
CRTC3-207ENST00000560047 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
CRTC3-207ENST00000560047 LZTS3O60299 673 aaPredicted RBP12.29□□□□□ -0.44
CRTC3-207ENST00000560047 MYCP01106 439 aaPredicted RBP12.29□□□□□ -0.44
CRTC3-207ENST00000560047 SCARF1Q14162 830 aa12.29□□□□□ -0.44
CRTC3-207ENST00000560047 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
CRTC3-207ENST00000560047 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
CRTC3-207ENST00000560047 MRC2Q9UBG0 1479 aa12.28□□□□□ -0.44
CRTC3-207ENST00000560047 UCN2Q96RP3 112 aa12.28□□□□□ -0.44
CRTC3-207ENST00000560047 TIMELESSQ9UNS1 1208 aa12.28□□□□□ -0.44
CRTC3-207ENST00000560047 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
CRTC3-207ENST00000560047 BMP1P13497 986 aa12.27□□□□□ -0.45
CRTC3-207ENST00000560047 SCTRP47872 440 aa12.27□□□□□ -0.45
CRTC3-207ENST00000560047 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
CRTC3-207ENST00000560047 TBC1D9Q6ZT07 1266 aa12.27□□□□□ -0.45
CRTC3-207ENST00000560047 TRIM46Q7Z4K8 759 aa12.27□□□□□ -0.45
CRTC3-207ENST00000560047 ADH1AP07327 375 aa12.26□□□□□ -0.45
CRTC3-207ENST00000560047 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
CRTC3-207ENST00000560047 ATP9BO43861 1147 aa12.25□□□□□ -0.45
CRTC3-207ENST00000560047 LINC00528Q8N1L1 170 aa12.25□□□□□ -0.45
CRTC3-207ENST00000560047 TFIP11Q9UBB9 837 aaKnown RBP12.25□□□□□ -0.45
CRTC3-207ENST00000560047 USP17L5A8MUK1 530 aa12.24□□□□□ -0.45
CRTC3-207ENST00000560047 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
CRTC3-207ENST00000560047 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
CRTC3-207ENST00000560047 AGBL1Q96MI9 1066 aa12.24□□□□□ -0.45
CRTC3-207ENST00000560047 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
CRTC3-207ENST00000560047 CUX1P39880 1505 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 BMP2P12643 396 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 PTGIRP43119 386 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 RELBQ01201 579 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 EML3Q32P44 896 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 C6orf118Q5T5N4 469 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 CYP2U1Q7Z449 544 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
CRTC3-207ENST00000560047 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 OSBPL3Q9H4L5 887 aa12.23□□□□□ -0.45
CRTC3-207ENST00000560047 WDR62O43379 1518 aa12.22□□□□□ -0.45
CRTC3-207ENST00000560047 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-207ENST00000560047 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
CRTC3-207ENST00000560047 ZFP42Q96MM3 310 aa12.22□□□□□ -0.45
CRTC3-207ENST00000560047 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
CRTC3-207ENST00000560047 NCOA4Q13772 614 aa12.21□□□□□ -0.45
CRTC3-207ENST00000560047 DEPDC4Q8N2C3 294 aa12.21□□□□□ -0.45
CRTC3-207ENST00000560047 KIFC2Q96AC6 838 aa12.21□□□□□ -0.45
CRTC3-207ENST00000560047 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.45
CRTC3-207ENST00000560047 NOD1Q9Y239 953 aa12.21□□□□□ -0.45
CRTC3-207ENST00000560047 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
CRTC3-207ENST00000560047 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
CRTC3-207ENST00000560047 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 USP17L3A6NCW0 530 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 USP17L4A6NCW7 530 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 SPINT1O43278 529 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 GNRH1P01148 92 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 USP17L2Q6R6M4 530 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 USP17L1Q7RTZ2 530 aa12.19□□□□□ -0.46
CRTC3-207ENST00000560047 ZNF395Q9H8N7 513 aaPredicted RBP12.19□□□□□ -0.46
CRTC3-207ENST00000560047 MAFBQ9Y5Q3 323 aaPredicted RBP12.18□□□□□ -0.46
CRTC3-207ENST00000560047 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
CRTC3-207ENST00000560047 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
CRTC3-207ENST00000560047 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
CRTC3-207ENST00000560047 SERPINA10Q9UK55 444 aa12.17□□□□□ -0.46
CRTC3-207ENST00000560047 A0A1W2PRU2 124 aa12.16□□□□□ -0.46
CRTC3-207ENST00000560047 POTECB2RU33 542 aa12.16□□□□□ -0.46
CRTC3-207ENST00000560047 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
CRTC3-207ENST00000560047 TRIM50Q86XT4 487 aa12.16□□□□□ -0.46
CRTC3-207ENST00000560047 CUX2O14529 1486 aa12.15□□□□□ -0.46
CRTC3-207ENST00000560047 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
CRTC3-207ENST00000560047 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
CRTC3-207ENST00000560047 ZNF787Q6DD87 383 aa12.15□□□□□ -0.46
CRTC3-207ENST00000560047 INSM2Q96T92 566 aaPredicted RBP12.15□□□□□ -0.46
CRTC3-207ENST00000560047 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
CRTC3-207ENST00000560047 TOP2BQ02880 1626 aa12.15□□□□□ -0.47
CRTC3-207ENST00000560047 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
CRTC3-207ENST00000560047 PCDHGA11Q9Y5H2 935 aa12.14□□□□□ -0.47
CRTC3-207ENST00000560047 SOGA1O94964 1423 aa12.13□□□□□ -0.47
CRTC3-207ENST00000560047 MEN1O00255 615 aa12.13□□□□□ -0.47
CRTC3-207ENST00000560047 GTF2IP78347 998 aa12.13□□□□□ -0.47
CRTC3-207ENST00000560047 CLN3Q13286 438 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms