RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 ZCRB1Q8TBF4 217 aaKnown RBP28.26■■■□□ 2.11
CHRNA3-207ENST00000559941 EMILIN1Q9Y6C2 1016 aa28.26■■■□□ 2.11
CHRNA3-207ENST00000559941 USHBP1Q8N6Y0 703 aa28.25■■■□□ 2.11
CHRNA3-207ENST00000559941 RAPGEF4Q8WZA2 1011 aa28.22■■■□□ 2.11
CHRNA3-207ENST00000559941 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
CHRNA3-207ENST00000559941 CASZ1Q86V15 1759 aa28.21■■■□□ 2.11
CHRNA3-207ENST00000559941 PANK3Q9H999 370 aa28.2■■■□□ 2.1
CHRNA3-207ENST00000559941 WASHC2AQ641Q2 1341 aa28.19■■■□□ 2.1
CHRNA3-207ENST00000559941 TATP17735 454 aaPredicted RBP28.19■■■□□ 2.1
CHRNA3-207ENST00000559941 PPM1GO15355 546 aaPredicted RBP28.18■■■□□ 2.1
CHRNA3-207ENST00000559941 STK32BQ9NY57 414 aa28.18■■■□□ 2.1
CHRNA3-207ENST00000559941 POLKQ9UBT6 870 aa28.18■■■□□ 2.1
CHRNA3-207ENST00000559941 SLC15A2Q16348 729 aa28.17■■■□□ 2.1
CHRNA3-207ENST00000559941 SPON1Q9HCB6 807 aa28.17■■■□□ 2.1
CHRNA3-207ENST00000559941 PAPPAQ13219 1627 aa28.15■■■□□ 2.1
CHRNA3-207ENST00000559941 PRIM1P49642 420 aaKnown RBP28.15■■■□□ 2.1
CHRNA3-207ENST00000559941 NCAPD2Q15021 1401 aa28.15■■■□□ 2.1
CHRNA3-207ENST00000559941 SYTL4Q96C24 671 aaPredicted RBP28.13■■■□□ 2.09
CHRNA3-207ENST00000559941 NSD2O96028 1365 aa28.12■■■□□ 2.09
CHRNA3-207ENST00000559941 PDGFDQ9GZP0 370 aaPredicted RBP28.12■■■□□ 2.09
CHRNA3-207ENST00000559941 PKD1L3Q7Z443 1732 aa28.12■■■□□ 2.09
CHRNA3-207ENST00000559941 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
CHRNA3-207ENST00000559941 LRRC4BQ9NT99 713 aa28.11■■■□□ 2.09
CHRNA3-207ENST00000559941 LY75O60449 1722 aa28.11■■■□□ 2.09
CHRNA3-207ENST00000559941 PCDH11XQ9BZA7 1347 aa28.11■■■□□ 2.09
CHRNA3-207ENST00000559941 PCDH11YQ9BZA8 1340 aa28.11■■■□□ 2.09
CHRNA3-207ENST00000559941 SLC27A3Q5K4L6 730 aa28.09■■■□□ 2.09
CHRNA3-207ENST00000559941 EYA1Q99502 592 aa28.09■■■□□ 2.09
CHRNA3-207ENST00000559941 CYP27B1O15528 508 aa28.06■■■□□ 2.08
CHRNA3-207ENST00000559941 PPP1R1BQ9UD71 204 aaPredicted RBP28.06■■■□□ 2.08
CHRNA3-207ENST00000559941 ZBTB7AO95365 584 aa28.05■■■□□ 2.08
CHRNA3-207ENST00000559941 EIF4A2Q14240 407 aaKnown RBP28.05■■■□□ 2.08
CHRNA3-207ENST00000559941 KIF7Q2M1P5 1343 aa28.05■■■□□ 2.08
CHRNA3-207ENST00000559941 KNSTRNQ9Y448 316 aa28.05■■■□□ 2.08
CHRNA3-207ENST00000559941 ZNF827Q17R98 1081 aa28.04■■■□□ 2.08
CHRNA3-207ENST00000559941 QSER1Q2KHR3 1735 aa28.04■■■□□ 2.08
CHRNA3-207ENST00000559941 MORC1Q86VD1 984 aa28.03■■■□□ 2.08
CHRNA3-207ENST00000559941 ITGB4P16144 1822 aa28.03■■■□□ 2.08
CHRNA3-207ENST00000559941 TOGARAM1Q9Y4F4 1720 aa28.02■■■□□ 2.08
CHRNA3-207ENST00000559941 AKT1S1Q96B36 256 aa28.02■■■□□ 2.08
CHRNA3-207ENST00000559941 SPG7Q9UQ90 795 aa28.02■■■□□ 2.08
CHRNA3-207ENST00000559941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.01■■■□□ 2.07
CHRNA3-207ENST00000559941 MTFR1LQ9H019 292 aa28■■■□□ 2.07
CHRNA3-207ENST00000559941 ATF5Q9Y2D1 282 aaPredicted RBP28■■■□□ 2.07
CHRNA3-207ENST00000559941 PTGER2P43116 358 aa27.99■■■□□ 2.07
CHRNA3-207ENST00000559941 NKX1-1Q15270 411 aaPredicted RBP27.99■■■□□ 2.07
CHRNA3-207ENST00000559941 KCNQ4P56696 695 aa27.98■■■□□ 2.07
CHRNA3-207ENST00000559941 TUBGCP6Q96RT7 1819 aa27.97■■■□□ 2.07
CHRNA3-207ENST00000559941 AMER1Q5JTC6 1135 aaPredicted RBP27.97■■■□□ 2.07
CHRNA3-207ENST00000559941 CCNL1Q9UK58 526 aaPredicted RBP27.97■■■□□ 2.07
CHRNA3-207ENST00000559941 IGSF1Q8N6C5 1336 aa27.96■■■□□ 2.07
CHRNA3-207ENST00000559941 MPRIPQ6WCQ1 1025 aa27.96■■■□□ 2.07
CHRNA3-207ENST00000559941 PLEKHG2Q9H7P9 1386 aa27.96■■■□□ 2.07
CHRNA3-207ENST00000559941 SGIP1Q9BQI5 828 aa27.94■■■□□ 2.06
CHRNA3-207ENST00000559941 PER1O15534 1290 aaPredicted RBP27.92■■■□□ 2.06
CHRNA3-207ENST00000559941 IFNL2Q8IZJ0 200 aa27.92■■■□□ 2.06
CHRNA3-207ENST00000559941 TAF1LQ8IZX4 1826 aa27.92■■■□□ 2.06
CHRNA3-207ENST00000559941 PALLDQ8WX93 1383 aa27.91■■■□□ 2.06
CHRNA3-207ENST00000559941 PHKG2P15735 406 aa27.91■■■□□ 2.06
CHRNA3-207ENST00000559941 SLC16A10Q8TF71 515 aa27.91■■■□□ 2.06
CHRNA3-207ENST00000559941 TFCP2L1Q9NZI6 479 aa27.91■■■□□ 2.06
CHRNA3-207ENST00000559941 PNPLA7Q6ZV29 1317 aa27.91■■■□□ 2.06
CHRNA3-207ENST00000559941 C5P01031 1676 aa27.91■■■□□ 2.06
CHRNA3-207ENST00000559941 PIGBQ92521 554 aa27.9■■■□□ 2.06
CHRNA3-207ENST00000559941 SMARCC1Q92922 1105 aaPredicted RBP27.89■■■□□ 2.06
CHRNA3-207ENST00000559941 COL24A1Q17RW2 1714 aa27.89■■■□□ 2.05
CHRNA3-207ENST00000559941 HMGB2P26583 209 aaKnown RBP27.88■■■□□ 2.05
CHRNA3-207ENST00000559941 PLEKHO1Q53GL0 409 aaPredicted RBP27.85■■■□□ 2.05
CHRNA3-207ENST00000559941 ARXQ96QS3 562 aa27.84■■■□□ 2.05
CHRNA3-207ENST00000559941 TMOD3Q9NYL9 352 aa27.84■■■□□ 2.05
CHRNA3-207ENST00000559941 IL13P35225 146 aa27.83■■■□□ 2.05
CHRNA3-207ENST00000559941 AMOTQ4VCS5 1084 aa27.82■■■□□ 2.04
CHRNA3-207ENST00000559941 AEBP1Q8IUX7 1158 aa27.82■■■□□ 2.04
CHRNA3-207ENST00000559941 FHDC1Q9C0D6 1143 aaPredicted RBP27.82■■■□□ 2.04
CHRNA3-207ENST00000559941 DCAF8L1A6NGE4 600 aa27.81■■■□□ 2.04
CHRNA3-207ENST00000559941 SYT17Q9BSW7 474 aa27.81■■■□□ 2.04
CHRNA3-207ENST00000559941 KDRP35968 1356 aa27.81■■■□□ 2.04
CHRNA3-207ENST00000559941 HSP90AB1P08238 724 aaKnown RBP27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 MTHFSP49914 203 aa27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 CC2D1BQ5T0F9 858 aaKnown RBP27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 SULT6B1Q6IMI4 303 aa27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 COL23A1Q86Y22 540 aaPredicted RBP27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 NPC1L1Q9UHC9 1359 aa27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 C4BP0C0L5 1744 aa27.8■■■□□ 2.04
CHRNA3-207ENST00000559941 ERVV-2B6SEH9 535 aa27.78■■■□□ 2.04
CHRNA3-207ENST00000559941 ZNF530Q6P9A1 599 aaPredicted RBP27.78■■■□□ 2.04
CHRNA3-207ENST00000559941 DCAF5Q96JK2 942 aa27.78■■■□□ 2.04
CHRNA3-207ENST00000559941 ASAP1Q9ULH1 1129 aa27.78■■■□□ 2.04
CHRNA3-207ENST00000559941 MAP3K5Q99683 1374 aa27.77■■■□□ 2.04
CHRNA3-207ENST00000559941 LOC102724428A0A0B4J2F2 783 aa27.77■■■□□ 2.04
CHRNA3-207ENST00000559941 POLD1P28340 1107 aa27.77■■■□□ 2.04
CHRNA3-207ENST00000559941 SIK1P57059 783 aa27.77■■■□□ 2.04
CHRNA3-207ENST00000559941 FLAD1Q8NFF5 587 aa27.76■■■□□ 2.03
CHRNA3-207ENST00000559941 ATG3Q9NT62 314 aa27.76■■■□□ 2.03
CHRNA3-207ENST00000559941 UBR3Q6ZT12 1888 aa27.76■■■□□ 2.03
CHRNA3-207ENST00000559941 MSH5O43196 834 aa27.75■■■□□ 2.03
CHRNA3-207ENST00000559941 KDM6AO15550 1401 aaPredicted RBP27.74■■■□□ 2.03
CHRNA3-207ENST00000559941 C1orf141Q5JVX7 400 aa27.72■■■□□ 2.03
CHRNA3-207ENST00000559941 AK7Q96M32 723 aa27.72■■■□□ 2.03
CHRNA3-207ENST00000559941 LINC00116Q8NCU8 138 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms