RNA–Protein interactions for RNA: ENST00000559779.1

CERNA1-201, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 3 BASIC

Gene CERNA1, Length 908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-201ENST00000559779 PANK3Q9H999 370 aa22.4■■□□□ 1.18
CERNA1-201ENST00000559779 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
CERNA1-201ENST00000559779 TNNT2P45379 298 aaPredicted RBP22.39■■□□□ 1.17
CERNA1-201ENST00000559779 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
CERNA1-201ENST00000559779 TATP17735 454 aaPredicted RBP22.38■■□□□ 1.17
CERNA1-201ENST00000559779 STK32BQ9NY57 414 aa22.38■■□□□ 1.17
CERNA1-201ENST00000559779 BTAF1O14981 1849 aa22.37■■□□□ 1.17
CERNA1-201ENST00000559779 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
CERNA1-201ENST00000559779 MAP2P11137 1827 aaKnown RBP22.35■■□□□ 1.17
CERNA1-201ENST00000559779 SPON1Q9HCB6 807 aa22.34■■□□□ 1.17
CERNA1-201ENST00000559779 POLKQ9UBT6 870 aa22.34■■□□□ 1.17
CERNA1-201ENST00000559779 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
CERNA1-201ENST00000559779 WASHC2AQ641Q2 1341 aa22.33■■□□□ 1.17
CERNA1-201ENST00000559779 DOT1LQ8TEK3 1739 aa22.33■■□□□ 1.17
CERNA1-201ENST00000559779 ANKRD26Q9UPS8 1709 aa22.33■■□□□ 1.17
CERNA1-201ENST00000559779 SLC15A2Q16348 729 aa22.32■■□□□ 1.16
CERNA1-201ENST00000559779 PPP1R1BQ9UD71 204 aaPredicted RBP22.31■■□□□ 1.16
CERNA1-201ENST00000559779 PDGFDQ9GZP0 370 aaPredicted RBP22.3■■□□□ 1.16
CERNA1-201ENST00000559779 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
CERNA1-201ENST00000559779 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
CERNA1-201ENST00000559779 KNSTRNQ9Y448 316 aa22.29■■□□□ 1.16
CERNA1-201ENST00000559779 ZBTB7AO95365 584 aa22.28■■□□□ 1.16
CERNA1-201ENST00000559779 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
CERNA1-201ENST00000559779 EYA1Q99502 592 aa22.28■■□□□ 1.16
CERNA1-201ENST00000559779 NSD2O96028 1365 aa22.27■■□□□ 1.16
CERNA1-201ENST00000559779 LRRC4BQ9NT99 713 aa22.27■■□□□ 1.16
CERNA1-201ENST00000559779 CASZ1Q86V15 1759 aa22.27■■□□□ 1.16
CERNA1-201ENST00000559779 KIF7Q2M1P5 1343 aa22.27■■□□□ 1.16
CERNA1-201ENST00000559779 SLC27A3Q5K4L6 730 aa22.26■■□□□ 1.15
CERNA1-201ENST00000559779 EIF4A2Q14240 407 aaKnown RBP22.25■■□□□ 1.15
CERNA1-201ENST00000559779 KCNQ4P56696 695 aa22.24■■□□□ 1.15
CERNA1-201ENST00000559779 SPG7Q9UQ90 795 aa22.24■■□□□ 1.15
CERNA1-201ENST00000559779 ATF5Q9Y2D1 282 aaPredicted RBP22.24■■□□□ 1.15
CERNA1-201ENST00000559779 PAPPAQ13219 1627 aa22.24■■□□□ 1.15
CERNA1-201ENST00000559779 CYP27B1O15528 508 aa22.23■■□□□ 1.15
CERNA1-201ENST00000559779 ZNF827Q17R98 1081 aa22.23■■□□□ 1.15
CERNA1-201ENST00000559779 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
CERNA1-201ENST00000559779 MPRIPQ6WCQ1 1025 aa22.22■■□□□ 1.15
CERNA1-201ENST00000559779 PKD1L3Q7Z443 1732 aa22.21■■□□□ 1.15
CERNA1-201ENST00000559779 CCNL1Q9UK58 526 aaPredicted RBP22.21■■□□□ 1.15
CERNA1-201ENST00000559779 MTFR1LQ9H019 292 aa22.2■■□□□ 1.14
CERNA1-201ENST00000559779 AKT1S1Q96B36 256 aa22.19■■□□□ 1.14
CERNA1-201ENST00000559779 LY75O60449 1722 aa22.19■■□□□ 1.14
CERNA1-201ENST00000559779 TFCP2L1Q9NZI6 479 aa22.18■■□□□ 1.14
CERNA1-201ENST00000559779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.14
CERNA1-201ENST00000559779 PTGER2P43116 358 aa22.16■■□□□ 1.14
CERNA1-201ENST00000559779 AMER1Q5JTC6 1135 aaPredicted RBP22.16■■□□□ 1.14
CERNA1-201ENST00000559779 IGSF1Q8N6C5 1336 aa22.15■■□□□ 1.14
CERNA1-201ENST00000559779 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
CERNA1-201ENST00000559779 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
CERNA1-201ENST00000559779 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.14
CERNA1-201ENST00000559779 PALLDQ8WX93 1383 aa22.14■■□□□ 1.14
CERNA1-201ENST00000559779 PHKG2P15735 406 aa22.14■■□□□ 1.13
CERNA1-201ENST00000559779 ITGB4P16144 1822 aa22.13■■□□□ 1.13
CERNA1-201ENST00000559779 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
CERNA1-201ENST00000559779 PNPLA7Q6ZV29 1317 aa22.12■■□□□ 1.13
CERNA1-201ENST00000559779 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
CERNA1-201ENST00000559779 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
CERNA1-201ENST00000559779 PIGBQ92521 554 aa22.12■■□□□ 1.13
CERNA1-201ENST00000559779 SMARCC1Q92922 1105 aaPredicted RBP22.12■■□□□ 1.13
CERNA1-201ENST00000559779 MSH5O43196 834 aa22.11■■□□□ 1.13
CERNA1-201ENST00000559779 TMOD3Q9NYL9 352 aa22.11■■□□□ 1.13
CERNA1-201ENST00000559779 PER1O15534 1290 aaPredicted RBP22.1■■□□□ 1.13
CERNA1-201ENST00000559779 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
CERNA1-201ENST00000559779 QSER1Q2KHR3 1735 aa22.09■■□□□ 1.13
CERNA1-201ENST00000559779 HMGB2P26583 209 aaKnown RBP22.09■■□□□ 1.13
CERNA1-201ENST00000559779 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
CERNA1-201ENST00000559779 SLC16A10Q8TF71 515 aa22.09■■□□□ 1.13
CERNA1-201ENST00000559779 SGIP1Q9BQI5 828 aa22.09■■□□□ 1.13
CERNA1-201ENST00000559779 MTHFSP49914 203 aa22.08■■□□□ 1.13
CERNA1-201ENST00000559779 SULT6B1Q6IMI4 303 aa22.08■■□□□ 1.13
CERNA1-201ENST00000559779 ARXQ96QS3 562 aa22.08■■□□□ 1.13
CERNA1-201ENST00000559779 FHDC1Q9C0D6 1143 aaPredicted RBP22.08■■□□□ 1.13
CERNA1-201ENST00000559779 PLEKHG2Q9H7P9 1386 aa22.08■■□□□ 1.12
CERNA1-201ENST00000559779 TUBGCP6Q96RT7 1819 aa22.08■■□□□ 1.12
CERNA1-201ENST00000559779 C5P01031 1676 aa22.07■■□□□ 1.12
CERNA1-201ENST00000559779 IL13P35225 146 aa22.07■■□□□ 1.12
CERNA1-201ENST00000559779 AMOTQ4VCS5 1084 aa22.07■■□□□ 1.12
CERNA1-201ENST00000559779 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
CERNA1-201ENST00000559779 POLD1P28340 1107 aa22.06■■□□□ 1.12
CERNA1-201ENST00000559779 ZNF530Q6P9A1 599 aaPredicted RBP22.06■■□□□ 1.12
CERNA1-201ENST00000559779 SYT17Q9BSW7 474 aa22.05■■□□□ 1.12
CERNA1-201ENST00000559779 COL23A1Q86Y22 540 aaPredicted RBP22.04■■□□□ 1.12
CERNA1-201ENST00000559779 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
CERNA1-201ENST00000559779 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
CERNA1-201ENST00000559779 C1orf141Q5JVX7 400 aa22.03■■□□□ 1.12
CERNA1-201ENST00000559779 KLHL34Q8N239 644 aa22.03■■□□□ 1.12
CERNA1-201ENST00000559779 AK7Q96M32 723 aa22.03■■□□□ 1.12
CERNA1-201ENST00000559779 TAF1LQ8IZX4 1826 aa22.03■■□□□ 1.12
CERNA1-201ENST00000559779 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
CERNA1-201ENST00000559779 SIK1P57059 783 aa22.02■■□□□ 1.12
CERNA1-201ENST00000559779 ERVV-2B6SEH9 535 aa22.01■■□□□ 1.11
CERNA1-201ENST00000559779 ATG3Q9NT62 314 aa22.01■■□□□ 1.11
CERNA1-201ENST00000559779 KDRP35968 1356 aa22■■□□□ 1.11
CERNA1-201ENST00000559779 C4BP0C0L5 1744 aa22■■□□□ 1.11
CERNA1-201ENST00000559779 DIAPH1O60610 1272 aaKnown RBP22■■□□□ 1.11
CERNA1-201ENST00000559779 ATP6V1AP38606 617 aa22■■□□□ 1.11
CERNA1-201ENST00000559779 CABP4P57796 275 aa22■■□□□ 1.11
CERNA1-201ENST00000559779 FLAD1Q8NFF5 587 aa22■■□□□ 1.11
CERNA1-201ENST00000559779 HMOX1P09601 288 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms