RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 INSM1Q01101 510 aaPredicted RBP8.22□□□□□ -1.09
SPG11-218ENST00000559754 KDF1Q8NAX2 398 aaPredicted RBP8.22□□□□□ -1.09
SPG11-218ENST00000559754 COG6Q9Y2V7 657 aa8.22□□□□□ -1.09
SPG11-218ENST00000559754 PTSQ03393 145 aa8.21□□□□□ -1.1
SPG11-218ENST00000559754 SEMA3FQ13275 785 aa8.21□□□□□ -1.1
SPG11-218ENST00000559754 RNF217Q8TC41 542 aa8.21□□□□□ -1.1
SPG11-218ENST00000559754 GPC1P35052 558 aa8.2□□□□□ -1.1
SPG11-218ENST00000559754 RNF135Q8IUD6 432 aa8.2□□□□□ -1.1
SPG11-218ENST00000559754 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
SPG11-218ENST00000559754 TRAK2O60296 914 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 VSIG8P0DPA2 414 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
SPG11-218ENST00000559754 SCTRP47872 440 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 RNF144AP50876 292 aaPredicted RBP8.19□□□□□ -1.1
SPG11-218ENST00000559754 LYSMD3Q7Z3D4 306 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 OSBPL3Q9H4L5 887 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
SPG11-218ENST00000559754 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
SPG11-218ENST00000559754 MEN1O00255 615 aa8.18□□□□□ -1.1
SPG11-218ENST00000559754 GMPRP36959 345 aa8.18□□□□□ -1.1
SPG11-218ENST00000559754 USP4Q13107 963 aa8.18□□□□□ -1.1
SPG11-218ENST00000559754 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
SPG11-218ENST00000559754 FOXD4L5Q5VV16 416 aaPredicted RBP8.18□□□□□ -1.1
SPG11-218ENST00000559754 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
SPG11-218ENST00000559754 CCDC85AQ96PX6 553 aaPredicted RBP8.18□□□□□ -1.1
SPG11-218ENST00000559754 SLC35F4A4IF30 521 aa8.17□□□□□ -1.1
SPG11-218ENST00000559754 GNRH1P01148 92 aa8.17□□□□□ -1.1
SPG11-218ENST00000559754 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
SPG11-218ENST00000559754 CCDC155Q8N6L0 562 aa8.17□□□□□ -1.1
SPG11-218ENST00000559754 ERBB4Q15303 1308 aa8.17□□□□□ -1.1
SPG11-218ENST00000559754 CLN3Q13286 438 aa8.16□□□□□ -1.1
SPG11-218ENST00000559754 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.1
SPG11-218ENST00000559754 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.1
SPG11-218ENST00000559754 ARHGEF10LQ9HCE6 1279 aa8.15□□□□□ -1.1
SPG11-218ENST00000559754 CHIC2Q9UKJ5 165 aa8.15□□□□□ -1.1
SPG11-218ENST00000559754 ESCO1Q5FWF5 840 aa8.14□□□□□ -1.11
SPG11-218ENST00000559754 PRICKLE2Q7Z3G6 844 aa8.14□□□□□ -1.11
SPG11-218ENST00000559754 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
SPG11-218ENST00000559754 ITGA6P23229 1130 aa8.13□□□□□ -1.11
SPG11-218ENST00000559754 OXLD1Q5BKU9 147 aa8.13□□□□□ -1.11
SPG11-218ENST00000559754 NANOS1Q8WY41 292 aaKnown RBP8.13□□□□□ -1.11
SPG11-218ENST00000559754 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
SPG11-218ENST00000559754 TSGA10IPQ3SY00 556 aa8.12□□□□□ -1.11
SPG11-218ENST00000559754 PLPP7Q8NBV4 271 aa8.12□□□□□ -1.11
SPG11-218ENST00000559754 CNKSR1Q969H4 720 aa8.12□□□□□ -1.11
SPG11-218ENST00000559754 GRIP2Q9C0E4 1043 aa8.12□□□□□ -1.11
SPG11-218ENST00000559754 STK17AQ9UEE5 414 aa8.12□□□□□ -1.11
SPG11-218ENST00000559754 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
SPG11-218ENST00000559754 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
SPG11-218ENST00000559754 WDR44Q5JSH3 913 aa8.11□□□□□ -1.11
SPG11-218ENST00000559754 RAB6BQ9NRW1 208 aa8.11□□□□□ -1.11
SPG11-218ENST00000559754 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
SPG11-218ENST00000559754 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
SPG11-218ENST00000559754 RHOQP17081 205 aa8.1□□□□□ -1.11
SPG11-218ENST00000559754 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
SPG11-218ENST00000559754 NFATC2IPQ8NCF5 419 aa8.1□□□□□ -1.11
SPG11-218ENST00000559754 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
SPG11-218ENST00000559754 ALG2Q9H553 416 aa8.1□□□□□ -1.11
SPG11-218ENST00000559754 CDC14CA4D256 554 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 SPATA31C2B4DYI2 1134 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 IL2RAP01589 272 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 POU4F2Q12837 409 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 TAS1R3Q7RTX0 852 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 ZSCAN1Q8NBB4 408 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
SPG11-218ENST00000559754 SKIP12755 728 aa8.08□□□□□ -1.12
SPG11-218ENST00000559754 CENPCQ03188 943 aa8.08□□□□□ -1.12
SPG11-218ENST00000559754 EML3Q32P44 896 aa8.08□□□□□ -1.12
SPG11-218ENST00000559754 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
SPG11-218ENST00000559754 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
SPG11-218ENST00000559754 ZSCAN10Q96SZ4 725 aaPredicted RBP8.08□□□□□ -1.12
SPG11-218ENST00000559754 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
SPG11-218ENST00000559754 H7C1W4 665 aa8.07□□□□□ -1.12
SPG11-218ENST00000559754 WASLO00401 505 aaPredicted RBP8.07□□□□□ -1.12
SPG11-218ENST00000559754 GNASQ5JWF2 1037 aa8.07□□□□□ -1.12
SPG11-218ENST00000559754 VWA5B2Q8N398 1253 aa8.07□□□□□ -1.12
SPG11-218ENST00000559754 HRH3Q9Y5N1 445 aa8.07□□□□□ -1.12
SPG11-218ENST00000559754 TMEM214Q6NUQ4 689 aaKnown RBP8.06□□□□□ -1.12
SPG11-218ENST00000559754 GPR161Q8N6U8 529 aaKnown RBP8.06□□□□□ -1.12
SPG11-218ENST00000559754 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
SPG11-218ENST00000559754 PIK3CDO00329 1044 aa8.05□□□□□ -1.12
SPG11-218ENST00000559754 PROSER2Q86WR7 435 aaPredicted RBP8.05□□□□□ -1.12
SPG11-218ENST00000559754 TRIM22Q8IYM9 498 aa8.05□□□□□ -1.12
SPG11-218ENST00000559754 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
SPG11-218ENST00000559754 FHDC1Q9C0D6 1143 aaPredicted RBP8.05□□□□□ -1.12
SPG11-218ENST00000559754 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
SPG11-218ENST00000559754 NOD1Q9Y239 953 aa8.05□□□□□ -1.12
SPG11-218ENST00000559754 INHAP05111 366 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 GDF10P55107 478 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 TLR1Q15399 786 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 FOXR1Q6PIV2 292 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 RIPOR1Q6ZS17 1223 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 CNTNAP3BQ96NU0 1288 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 GAS2L1Q99501 681 aaPredicted RBP8.04□□□□□ -1.12
SPG11-218ENST00000559754 CNTNAP3Q9BZ76 1288 aa8.04□□□□□ -1.12
SPG11-218ENST00000559754 POM121CA8CG34 1229 aa8.03□□□□□ -1.12
SPG11-218ENST00000559754 F11P03951 625 aa8.03□□□□□ -1.12
SPG11-218ENST00000559754 SCNN1DP51172 638 aa8.03□□□□□ -1.12
SPG11-218ENST00000559754 HDGFL1Q5TGJ6 251 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms