RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
CTDSPL2-207ENST00000559738 TRIM52Q96A61 297 aa8.96□□□□□ -0.98
CTDSPL2-207ENST00000559738 CCDC85AQ96PX6 553 aaPredicted RBP8.96□□□□□ -0.98
CTDSPL2-207ENST00000559738 SCTRP47872 440 aa8.95□□□□□ -0.98
CTDSPL2-207ENST00000559738 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
CTDSPL2-207ENST00000559738 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
CTDSPL2-207ENST00000559738 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
CTDSPL2-207ENST00000559738 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
CTDSPL2-207ENST00000559738 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
CTDSPL2-207ENST00000559738 CC2D2BQ6DHV5 1058 aa8.94□□□□□ -0.98
CTDSPL2-207ENST00000559738 CCDC125Q86Z20 511 aa8.94□□□□□ -0.98
CTDSPL2-207ENST00000559738 POM121CA8CG34 1229 aa8.93□□□□□ -0.98
CTDSPL2-207ENST00000559738 CCDC155Q8N6L0 562 aa8.93□□□□□ -0.98
CTDSPL2-207ENST00000559738 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
CTDSPL2-207ENST00000559738 SEMA3FQ13275 785 aa8.92□□□□□ -0.98
CTDSPL2-207ENST00000559738 FNBP4Q8N3X1 1017 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-207ENST00000559738 ALG2Q9H553 416 aa8.92□□□□□ -0.98
CTDSPL2-207ENST00000559738 STK17AQ9UEE5 414 aa8.92□□□□□ -0.98
CTDSPL2-207ENST00000559738 MEN1O00255 615 aa8.91□□□□□ -0.98
CTDSPL2-207ENST00000559738 SOX11P35716 441 aa8.91□□□□□ -0.98
CTDSPL2-207ENST00000559738 ADAMTS19Q8TE59 1207 aa8.91□□□□□ -0.98
CTDSPL2-207ENST00000559738 CHIC2Q9UKJ5 165 aa8.91□□□□□ -0.98
CTDSPL2-207ENST00000559738 SLC35F4A4IF30 521 aa8.9□□□□□ -0.98
CTDSPL2-207ENST00000559738 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
CTDSPL2-207ENST00000559738 RNF135Q8IUD6 432 aa8.9□□□□□ -0.98
CTDSPL2-207ENST00000559738 WWC1Q8IX03 1113 aa8.9□□□□□ -0.98
CTDSPL2-207ENST00000559738 OSBPL3Q9H4L5 887 aa8.9□□□□□ -0.98
CTDSPL2-207ENST00000559738 PIK3CDO00329 1044 aa8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 TRAK2O60296 914 aa8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 LYSMD3Q7Z3D4 306 aa8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 CYP2U1Q7Z449 544 aa8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 PROSER2Q86WR7 435 aaPredicted RBP8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 ZSCAN1Q8NBB4 408 aa8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 ESF1Q9H501 851 aaKnown RBP8.89□□□□□ -0.99
CTDSPL2-207ENST00000559738 SENP3-EIF4A1A0A087X0R7 540 aa8.88□□□□□ -0.99
CTDSPL2-207ENST00000559738 A0A1W2PRU2 124 aa8.88□□□□□ -0.99
CTDSPL2-207ENST00000559738 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
CTDSPL2-207ENST00000559738 RNF144AP50876 292 aaPredicted RBP8.88□□□□□ -0.99
CTDSPL2-207ENST00000559738 PRICKLE2Q7Z3G6 844 aa8.88□□□□□ -0.99
CTDSPL2-207ENST00000559738 A6NJR5 290 aa8.87□□□□□ -0.99
CTDSPL2-207ENST00000559738 ITGA6P23229 1130 aa8.87□□□□□ -0.99
CTDSPL2-207ENST00000559738 ARHGEF10LQ9HCE6 1279 aa8.87□□□□□ -0.99
CTDSPL2-207ENST00000559738 DOLKQ9UPQ8 538 aa8.87□□□□□ -0.99
CTDSPL2-207ENST00000559738 CDC14CA4D256 554 aa8.86□□□□□ -0.99
CTDSPL2-207ENST00000559738 RHOQP17081 205 aa8.86□□□□□ -0.99
CTDSPL2-207ENST00000559738 GPR161Q8N6U8 529 aaKnown RBP8.86□□□□□ -0.99
CTDSPL2-207ENST00000559738 NLRP3Q96P20 1036 aa8.86□□□□□ -0.99
CTDSPL2-207ENST00000559738 CLN3Q13286 438 aa8.85□□□□□ -0.99
CTDSPL2-207ENST00000559738 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
CTDSPL2-207ENST00000559738 PLPP7Q8NBV4 271 aa8.85□□□□□ -0.99
CTDSPL2-207ENST00000559738 NANOS1Q8WY41 292 aaKnown RBP8.85□□□□□ -0.99
CTDSPL2-207ENST00000559738 RAB6BQ9NRW1 208 aa8.85□□□□□ -0.99
CTDSPL2-207ENST00000559738 MYCP01106 439 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL2-207ENST00000559738 GPC1P35052 558 aa8.84□□□□□ -0.99
CTDSPL2-207ENST00000559738 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
CTDSPL2-207ENST00000559738 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
CTDSPL2-207ENST00000559738 FAM181BA6NEQ2 426 aa8.83□□□□□ -1
CTDSPL2-207ENST00000559738 KRT76Q01546 638 aa8.83□□□□□ -1
CTDSPL2-207ENST00000559738 MAP7D1Q3KQU3 841 aa8.83□□□□□ -1
CTDSPL2-207ENST00000559738 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
CTDSPL2-207ENST00000559738 UCN2Q96RP3 112 aa8.83□□□□□ -1
CTDSPL2-207ENST00000559738 USP4Q13107 963 aa8.82□□□□□ -1
CTDSPL2-207ENST00000559738 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
CTDSPL2-207ENST00000559738 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
CTDSPL2-207ENST00000559738 CNTNAP3Q9BZ76 1288 aa8.82□□□□□ -1
CTDSPL2-207ENST00000559738 GTF3C3Q9Y5Q9 886 aa8.82□□□□□ -1
CTDSPL2-207ENST00000559738 STAU1O95793 577 aaKnown RBP8.81□□□□□ -1
CTDSPL2-207ENST00000559738 GNRH1P01148 92 aa8.81□□□□□ -1
CTDSPL2-207ENST00000559738 SKIP12755 728 aa8.81□□□□□ -1
CTDSPL2-207ENST00000559738 SV2AQ7L0J3 742 aa8.81□□□□□ -1
CTDSPL2-207ENST00000559738 IL2RAP01589 272 aa8.8□□□□□ -1
CTDSPL2-207ENST00000559738 POU4F2Q12837 409 aa8.8□□□□□ -1
CTDSPL2-207ENST00000559738 RNFT1Q5M7Z0 435 aa8.8□□□□□ -1
CTDSPL2-207ENST00000559738 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
CTDSPL2-207ENST00000559738 GLMNQ92990 594 aa8.8□□□□□ -1
CTDSPL2-207ENST00000559738 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
CTDSPL2-207ENST00000559738 CUEDC1Q9NWM3 386 aaPredicted RBP8.8□□□□□ -1
CTDSPL2-207ENST00000559738 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
CTDSPL2-207ENST00000559738 CNKSR1Q969H4 720 aa8.79□□□□□ -1
CTDSPL2-207ENST00000559738 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
CTDSPL2-207ENST00000559738 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
CTDSPL2-207ENST00000559738 NBPF15Q8N660 670 aa8.78□□□□□ -1
CTDSPL2-207ENST00000559738 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
CTDSPL2-207ENST00000559738 HRH3Q9Y5N1 445 aa8.78□□□□□ -1
CTDSPL2-207ENST00000559738 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
CTDSPL2-207ENST00000559738 NCOA4Q13772 614 aa8.77□□□□□ -1.01
CTDSPL2-207ENST00000559738 RIPOR1Q6ZS17 1223 aa8.77□□□□□ -1.01
CTDSPL2-207ENST00000559738 SIRT1Q96EB6 747 aa8.77□□□□□ -1.01
CTDSPL2-207ENST00000559738 SPATA31C2B4DYI2 1134 aa8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 SCNN1DP51172 638 aa8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 TAS1R3Q7RTX0 852 aa8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 GAS2L1Q99501 681 aaPredicted RBP8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
CTDSPL2-207ENST00000559738 CENPCQ03188 943 aa8.75□□□□□ -1.01
CTDSPL2-207ENST00000559738 EML3Q32P44 896 aa8.75□□□□□ -1.01
CTDSPL2-207ENST00000559738 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
CTDSPL2-207ENST00000559738 ZNF837Q96EG3 531 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms