RNA–Protein interactions for RNA: ENST00000559680.1

NTRK3-215, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene NTRK3, Length 441 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-215ENST00000559680 PDE3BQ13370 1112 aa14.28□□□□□ -0.12
NTRK3-215ENST00000559680 LRRC37A3O60309 1634 aa14.27□□□□□ -0.12
NTRK3-215ENST00000559680 TNS2Q63HR2 1409 aa14.27□□□□□ -0.12
NTRK3-215ENST00000559680 CCER2I3L3R5 266 aa14.27□□□□□ -0.13
NTRK3-215ENST00000559680 FCHSD2O94868 740 aa14.27□□□□□ -0.13
NTRK3-215ENST00000559680 HMOX1P09601 288 aa14.27□□□□□ -0.13
NTRK3-215ENST00000559680 AMOTQ4VCS5 1084 aa14.27□□□□□ -0.13
NTRK3-215ENST00000559680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
NTRK3-215ENST00000559680 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
NTRK3-215ENST00000559680 MEGF6O75095 1541 aa14.26□□□□□ -0.13
NTRK3-215ENST00000559680 PLEKHO1Q53GL0 409 aaPredicted RBP14.26□□□□□ -0.13
NTRK3-215ENST00000559680 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
NTRK3-215ENST00000559680 PKD1L3Q7Z443 1732 aa14.26□□□□□ -0.13
NTRK3-215ENST00000559680 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
NTRK3-215ENST00000559680 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
NTRK3-215ENST00000559680 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
NTRK3-215ENST00000559680 BRWD3Q6RI45 1802 aa14.25□□□□□ -0.13
NTRK3-215ENST00000559680 KRT27Q7Z3Y8 459 aa14.24□□□□□ -0.13
NTRK3-215ENST00000559680 RSPH6AQ9H0K4 717 aa14.24□□□□□ -0.13
NTRK3-215ENST00000559680 MAPK8IP3Q9UPT6 1336 aa14.23□□□□□ -0.13
NTRK3-215ENST00000559680 PRKAR2BP31323 418 aa14.23□□□□□ -0.13
NTRK3-215ENST00000559680 C1orf141Q5JVX7 400 aa14.22□□□□□ -0.13
NTRK3-215ENST00000559680 GAS2L2Q8NHY3 880 aa14.22□□□□□ -0.13
NTRK3-215ENST00000559680 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
NTRK3-215ENST00000559680 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.13
NTRK3-215ENST00000559680 MIER1Q8N108 512 aa14.21□□□□□ -0.13
NTRK3-215ENST00000559680 DDX54Q8TDD1 881 aaKnown RBP14.21□□□□□ -0.13
NTRK3-215ENST00000559680 SHANK3Q9BYB0 1731 aa14.21□□□□□ -0.14
NTRK3-215ENST00000559680 CCDC184Q52MB2 194 aa14.2□□□□□ -0.14
NTRK3-215ENST00000559680 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
NTRK3-215ENST00000559680 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
NTRK3-215ENST00000559680 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
NTRK3-215ENST00000559680 FAM196AQ6ZSG2 479 aa14.19□□□□□ -0.14
NTRK3-215ENST00000559680 RUNDC1Q96C34 613 aa14.19□□□□□ -0.14
NTRK3-215ENST00000559680 BCL9O00512 1426 aa14.18□□□□□ -0.14
NTRK3-215ENST00000559680 AKAP4Q5JQC9 854 aa14.18□□□□□ -0.14
NTRK3-215ENST00000559680 PHKG2P15735 406 aa14.17□□□□□ -0.14
NTRK3-215ENST00000559680 MTHFSDQ2M296 383 aaKnown RBP14.17□□□□□ -0.14
NTRK3-215ENST00000559680 FAM9BQ8IZU0 186 aa14.17□□□□□ -0.14
NTRK3-215ENST00000559680 MARCH10Q8NA82 808 aaPredicted RBP14.17□□□□□ -0.14
NTRK3-215ENST00000559680 PLEKHF1Q96S99 279 aa14.17□□□□□ -0.14
NTRK3-215ENST00000559680 CYP27B1O15528 508 aa14.16□□□□□ -0.14
NTRK3-215ENST00000559680 MAP3K5Q99683 1374 aa14.15□□□□□ -0.14
NTRK3-215ENST00000559680 GNAT3A8MTJ3 354 aa14.15□□□□□ -0.14
NTRK3-215ENST00000559680 LMOD3Q0VAK6 560 aa14.15□□□□□ -0.14
NTRK3-215ENST00000559680 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
NTRK3-215ENST00000559680 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.14
NTRK3-215ENST00000559680 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
NTRK3-215ENST00000559680 PHACTR3Q96KR7 559 aa14.15□□□□□ -0.14
NTRK3-215ENST00000559680 HTATSF1O43719 755 aaKnown RBP14.14□□□□□ -0.15
NTRK3-215ENST00000559680 NFE2L2Q16236 605 aa14.14□□□□□ -0.15
NTRK3-215ENST00000559680 CCDC146Q8IYE0 955 aa14.14□□□□□ -0.15
NTRK3-215ENST00000559680 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
NTRK3-215ENST00000559680 DOT1LQ8TEK3 1739 aa14.13□□□□□ -0.15
NTRK3-215ENST00000559680 VIRMAQ69YN4 1812 aaKnown RBP14.13□□□□□ -0.15
NTRK3-215ENST00000559680 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
NTRK3-215ENST00000559680 SCN11AQ9UI33 1791 aa14.12□□□□□ -0.15
NTRK3-215ENST00000559680 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
NTRK3-215ENST00000559680 NHSQ6T4R5 1651 aa14.12□□□□□ -0.15
NTRK3-215ENST00000559680 SF3B2Q13435 895 aaKnown RBP14.12□□□□□ -0.15
NTRK3-215ENST00000559680 FAM182BQ5T319 152 aa14.12□□□□□ -0.15
NTRK3-215ENST00000559680 ERVV-2B6SEH9 535 aa14.11□□□□□ -0.15
NTRK3-215ENST00000559680 TMPOP42166 694 aaKnown RBP14.11□□□□□ -0.15
NTRK3-215ENST00000559680 ILDR2Q71H61 639 aa14.11□□□□□ -0.15
NTRK3-215ENST00000559680 CCDC125Q86Z20 511 aa14.11□□□□□ -0.15
NTRK3-215ENST00000559680 RIPK4P57078 832 aa14.1□□□□□ -0.15
NTRK3-215ENST00000559680 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
NTRK3-215ENST00000559680 NGEFQ8N5V2 710 aa14.1□□□□□ -0.15
NTRK3-215ENST00000559680 SYTL4Q96C24 671 aaPredicted RBP14.1□□□□□ -0.15
NTRK3-215ENST00000559680 ACSBG1Q96GR2 724 aa14.1□□□□□ -0.15
NTRK3-215ENST00000559680 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
NTRK3-215ENST00000559680 ITGB4P16144 1822 aa14.09□□□□□ -0.15
NTRK3-215ENST00000559680 APAF1O14727 1248 aa14.09□□□□□ -0.15
NTRK3-215ENST00000559680 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
NTRK3-215ENST00000559680 CABP4P57796 275 aa14.09□□□□□ -0.15
NTRK3-215ENST00000559680 TEFQ10587 303 aa14.09□□□□□ -0.15
NTRK3-215ENST00000559680 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
NTRK3-215ENST00000559680 BCL11BQ9C0K0 894 aaPredicted RBP14.09□□□□□ -0.15
NTRK3-215ENST00000559680 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
NTRK3-215ENST00000559680 TOGARAM1Q9Y4F4 1720 aa14.09□□□□□ -0.15
NTRK3-215ENST00000559680 KDM6AO15550 1401 aaPredicted RBP14.08□□□□□ -0.15
NTRK3-215ENST00000559680 TRIM37O94972 964 aa14.08□□□□□ -0.16
NTRK3-215ENST00000559680 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
NTRK3-215ENST00000559680 NEUROD2Q15784 382 aa14.08□□□□□ -0.16
NTRK3-215ENST00000559680 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
NTRK3-215ENST00000559680 SLC52A2Q9HAB3 445 aa14.07□□□□□ -0.16
NTRK3-215ENST00000559680 CEMIPQ8WUJ3 1361 aa14.07□□□□□ -0.16
NTRK3-215ENST00000559680 MRC1P22897 1456 aa14.06□□□□□ -0.16
NTRK3-215ENST00000559680 RRP7AQ9Y3A4 280 aaKnown RBP14.06□□□□□ -0.16
NTRK3-215ENST00000559680 TNS1Q9HBL0 1735 aaKnown RBP14.06□□□□□ -0.16
NTRK3-215ENST00000559680 BTAF1O14981 1849 aa14.06□□□□□ -0.16
NTRK3-215ENST00000559680 HMGB2P26583 209 aaKnown RBP14.05□□□□□ -0.16
NTRK3-215ENST00000559680 BAG6P46379 1132 aa14.05□□□□□ -0.16
NTRK3-215ENST00000559680 CCDC27Q2M243 656 aa14.05□□□□□ -0.16
NTRK3-215ENST00000559680 MCM10Q7L590 875 aa14.05□□□□□ -0.16
NTRK3-215ENST00000559680 IL17REQ8NFR9 667 aa14.05□□□□□ -0.16
NTRK3-215ENST00000559680 SMARCC1Q92922 1105 aaPredicted RBP14.05□□□□□ -0.16
NTRK3-215ENST00000559680 LGR6Q9HBX8 967 aa14.05□□□□□ -0.16
NTRK3-215ENST00000559680 KCNQ2O43526 872 aa14.04□□□□□ -0.16
NTRK3-215ENST00000559680 APBA3O96018 575 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms