RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 MAP3K19Q56UN5 1328 aa11.53□□□□□ -0.56
CDK12-205ENST00000559663 MEGF6O75095 1541 aa11.52□□□□□ -0.57
CDK12-205ENST00000559663 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
CDK12-205ENST00000559663 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.57
CDK12-205ENST00000559663 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.57
CDK12-205ENST00000559663 GRIN3BO60391 1043 aa11.51□□□□□ -0.57
CDK12-205ENST00000559663 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
CDK12-205ENST00000559663 COG3Q96JB2 828 aa11.51□□□□□ -0.57
CDK12-205ENST00000559663 CHD4Q14839 1912 aa11.5□□□□□ -0.57
CDK12-205ENST00000559663 FAM208AQ9UK61 1670 aaKnown RBP11.5□□□□□ -0.57
CDK12-205ENST00000559663 YBX3P16989 372 aaKnown RBP eCLIP11.5□□□□□ -0.579e-17■■■■□ 19.3
CDK12-205ENST00000559663 RTL1A6NKG5 1358 aa11.5□□□□□ -0.57
CDK12-205ENST00000559663 SHANK3Q9BYB0 1731 aa11.49□□□□□ -0.57
CDK12-205ENST00000559663 AMPHP49418 695 aa11.49□□□□□ -0.57
CDK12-205ENST00000559663 COL23A1Q86Y22 540 aaPredicted RBP11.49□□□□□ -0.57
CDK12-205ENST00000559663 CGNL1Q0VF96 1302 aa11.49□□□□□ -0.57
CDK12-205ENST00000559663 USP47Q96K76 1375 aa11.49□□□□□ -0.57
CDK12-205ENST00000559663 MSH5O43196 834 aa11.48□□□□□ -0.57
CDK12-205ENST00000559663 FBLN1P23142 703 aa11.48□□□□□ -0.57
CDK12-205ENST00000559663 TESK2Q96S53 571 aa11.48□□□□□ -0.57
CDK12-205ENST00000559663 DOT1LQ8TEK3 1739 aa11.48□□□□□ -0.57
CDK12-205ENST00000559663 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
CDK12-205ENST00000559663 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
CDK12-205ENST00000559663 TUBGCP6Q96RT7 1819 aa11.46□□□□□ -0.57
CDK12-205ENST00000559663 LY75O60449 1722 aa11.46□□□□□ -0.57
CDK12-205ENST00000559663 ATP10DQ9P241 1426 aa11.46□□□□□ -0.57
CDK12-205ENST00000559663 MSL1Q68DK7 614 aa11.46□□□□□ -0.57
CDK12-205ENST00000559663 RAPGEF4Q8WZA2 1011 aa11.46□□□□□ -0.57
CDK12-205ENST00000559663 CD2APQ9Y5K6 639 aa11.46□□□□□ -0.57
CDK12-205ENST00000559663 SMG6Q86US8 1419 aaKnown RBP11.45□□□□□ -0.58
CDK12-205ENST00000559663 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
CDK12-205ENST00000559663 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
CDK12-205ENST00000559663 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
CDK12-205ENST00000559663 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
CDK12-205ENST00000559663 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
CDK12-205ENST00000559663 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
CDK12-205ENST00000559663 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
CDK12-205ENST00000559663 FLAD1Q8NFF5 587 aa11.45□□□□□ -0.58
CDK12-205ENST00000559663 ADCY9O60503 1353 aa11.44□□□□□ -0.58
CDK12-205ENST00000559663 PALLDQ8WX93 1383 aa11.44□□□□□ -0.58
CDK12-205ENST00000559663 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
CDK12-205ENST00000559663 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
CDK12-205ENST00000559663 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
CDK12-205ENST00000559663 FYB1O15117 783 aa11.43□□□□□ -0.58
CDK12-205ENST00000559663 GGNBP2Q9H3C7 697 aa11.43□□□□□ -0.58
CDK12-205ENST00000559663 INSRP06213 1382 aa11.42□□□□□ -0.58
CDK12-205ENST00000559663 HSP90AB2PQ58FF8 381 aa11.42□□□□□ -0.58
CDK12-205ENST00000559663 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
CDK12-205ENST00000559663 FLT4P35916 1363 aa11.41□□□□□ -0.58
CDK12-205ENST00000559663 KIF24Q5T7B8 1368 aa11.41□□□□□ -0.58
CDK12-205ENST00000559663 CYP27B1O15528 508 aa11.41□□□□□ -0.58
CDK12-205ENST00000559663 MPRIPQ6WCQ1 1025 aa11.41□□□□□ -0.58
CDK12-205ENST00000559663 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
CDK12-205ENST00000559663 AK7Q96M32 723 aa11.41□□□□□ -0.58
CDK12-205ENST00000559663 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
CDK12-205ENST00000559663 C5P01031 1676 aa11.4□□□□□ -0.59
CDK12-205ENST00000559663 KAT6BQ8WYB5 2073 aa11.39□□□□□ -0.59
CDK12-205ENST00000559663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
CDK12-205ENST00000559663 HSPA6P17066 643 aa11.39□□□□□ -0.59
CDK12-205ENST00000559663 NSD3Q9BZ95 1437 aa11.39□□□□□ -0.59
CDK12-205ENST00000559663 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 NCAPD2Q15021 1401 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 PHF14O94880 888 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 SSFA2P28290 1259 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 TMF1P82094 1093 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
CDK12-205ENST00000559663 PIGBQ92521 554 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 RGPD2P0DJD1 1756 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 C4BP0C0L5 1744 aa11.38□□□□□ -0.59
CDK12-205ENST00000559663 SMIM5Q71RC9 77 aa11.37□□□□□ -0.59
CDK12-205ENST00000559663 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
CDK12-205ENST00000559663 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
CDK12-205ENST00000559663 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
CDK12-205ENST00000559663 SIK1P57059 783 aa11.36□□□□□ -0.59
CDK12-205ENST00000559663 LINC00116Q8NCU8 138 aa11.36□□□□□ -0.59
CDK12-205ENST00000559663 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
CDK12-205ENST00000559663 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
CDK12-205ENST00000559663 SPG7Q9UQ90 795 aa11.35□□□□□ -0.59
CDK12-205ENST00000559663 KIF3CO14782 793 aa11.34□□□□□ -0.59
CDK12-205ENST00000559663 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
CDK12-205ENST00000559663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■□ 23.5
CDK12-205ENST00000559663 TMOD3Q9NYL9 352 aa11.34□□□□□ -0.59
CDK12-205ENST00000559663 CICQ96RK0 1608 aaPredicted RBP11.34□□□□□ -0.59
CDK12-205ENST00000559663 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
CDK12-205ENST00000559663 GNPATO15228 680 aa11.33□□□□□ -0.6
CDK12-205ENST00000559663 ITPK1Q13572 414 aa11.33□□□□□ -0.6
CDK12-205ENST00000559663 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
CDK12-205ENST00000559663 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
CDK12-205ENST00000559663 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
CDK12-205ENST00000559663 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
CDK12-205ENST00000559663 MMP10P09238 476 aa11.32□□□□□ -0.6
CDK12-205ENST00000559663 EYA1Q99502 592 aa11.32□□□□□ -0.6
CDK12-205ENST00000559663 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
CDK12-205ENST00000559663 PPM1GO15355 546 aaPredicted RBP11.31□□□□□ -0.6
CDK12-205ENST00000559663 PHKG2P15735 406 aa11.31□□□□□ -0.6
CDK12-205ENST00000559663 ATP6V1AP38606 617 aa11.31□□□□□ -0.6
CDK12-205ENST00000559663 IFNL2Q8IZJ0 200 aa11.31□□□□□ -0.6
CDK12-205ENST00000559663 ATG3Q9NT62 314 aa11.31□□□□□ -0.6
CDK12-205ENST00000559663 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
CDK12-205ENST00000559663 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms