RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SYTL4Q96C24 671 aaPredicted RBP5.92□□□□□ -1.46
SNX1-205ENST00000559339 ACSBG1Q96GR2 724 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 CAMKK2Q96RR4 588 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 SPG7Q9UQ90 795 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 PCDH11XQ9BZA7 1347 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 PCDH11YQ9BZA8 1340 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 BRWD3Q6RI45 1802 aa5.92□□□□□ -1.46
SNX1-205ENST00000559339 SRCAPQ6ZRS2 3230 aa5.91□□□□□ -1.46
SNX1-205ENST00000559339 PARP4Q9UKK3 1724 aaKnown RBP5.91□□□□□ -1.46
SNX1-205ENST00000559339 LTN1O94822 1766 aa5.91□□□□□ -1.46
SNX1-205ENST00000559339 HMGB2P26583 209 aaKnown RBP5.91□□□□□ -1.46
SNX1-205ENST00000559339 CNGB1Q14028 1251 aaPredicted RBP5.91□□□□□ -1.46
SNX1-205ENST00000559339 EIF4A2Q14240 407 aaKnown RBP5.91□□□□□ -1.46
SNX1-205ENST00000559339 EYA1Q99502 592 aa5.91□□□□□ -1.46
SNX1-205ENST00000559339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.91□□□□□ -1.46
SNX1-205ENST00000559339 LRRC37A3O60309 1634 aa5.9□□□□□ -1.46
SNX1-205ENST00000559339 KCNQ2O43526 872 aa5.9□□□□□ -1.46
SNX1-205ENST00000559339 MTHFSP49914 203 aa5.9□□□□□ -1.46
SNX1-205ENST00000559339 AMOTQ4VCS5 1084 aa5.9□□□□□ -1.46
SNX1-205ENST00000559339 NPC1L1Q9UHC9 1359 aa5.9□□□□□ -1.47
SNX1-205ENST00000559339 KIF20BQ96Q89 1820 aa5.9□□□□□ -1.47
SNX1-205ENST00000559339 FAM208AQ9UK61 1670 aaKnown RBP5.89□□□□□ -1.47
SNX1-205ENST00000559339 RGPD1P0DJD0 1748 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 RGPD5Q99666 1765 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 PSDA5PKW4 1024 aaPredicted RBP5.89□□□□□ -1.47
SNX1-205ENST00000559339 HSP90AB1P08238 724 aaKnown RBP5.89□□□□□ -1.47
SNX1-205ENST00000559339 PRIM1P49642 420 aaKnown RBP5.89□□□□□ -1.47
SNX1-205ENST00000559339 R3HDM1Q15032 1099 aaKnown RBP5.89□□□□□ -1.47
SNX1-205ENST00000559339 TXNRD1Q16881 649 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 PLEKHO1Q53GL0 409 aaPredicted RBP5.89□□□□□ -1.47
SNX1-205ENST00000559339 IFNL2Q8IZJ0 200 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 CFAP53Q96M91 514 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 IGSF1Q8N6C5 1336 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 PLEKHG2Q9H7P9 1386 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 MEGF6O75095 1541 aa5.89□□□□□ -1.47
SNX1-205ENST00000559339 DIAPH1O60610 1272 aaKnown RBP5.88□□□□□ -1.47
SNX1-205ENST00000559339 C1orf141Q5JVX7 400 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 SLC27A3Q5K4L6 730 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 SULT6B1Q6IMI4 303 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 MPRIPQ6WCQ1 1025 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 PTF1AQ7RTS3 328 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 STK32BQ9NY57 414 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 NUDCQ9Y266 331 aa5.88□□□□□ -1.47
SNX1-205ENST00000559339 CYP27B1O15528 508 aa5.87□□□□□ -1.47
SNX1-205ENST00000559339 IL13P35225 146 aa5.87□□□□□ -1.47
SNX1-205ENST00000559339 NKX1-1Q15270 411 aaPredicted RBP5.87□□□□□ -1.47
SNX1-205ENST00000559339 SMARCC1Q92922 1105 aaPredicted RBP5.87□□□□□ -1.47
SNX1-205ENST00000559339 DCAF5Q96JK2 942 aa5.87□□□□□ -1.47
SNX1-205ENST00000559339 TMOD3Q9NYL9 352 aa5.87□□□□□ -1.47
SNX1-205ENST00000559339 PEAK1Q9H792 1746 aa5.86□□□□□ -1.47
SNX1-205ENST00000559339 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
SNX1-205ENST00000559339 NEFMP07197 916 aa5.86□□□□□ -1.47
SNX1-205ENST00000559339 PHKG2P15735 406 aa5.86□□□□□ -1.47
SNX1-205ENST00000559339 SLC15A2Q16348 729 aa5.86□□□□□ -1.47
SNX1-205ENST00000559339 ZNF530Q6P9A1 599 aaPredicted RBP5.86□□□□□ -1.47
SNX1-205ENST00000559339 PROM2Q8N271 834 aa5.86□□□□□ -1.47
SNX1-205ENST00000559339 CCNL1Q9UK58 526 aaPredicted RBP5.86□□□□□ -1.47
SNX1-205ENST00000559339 MAP2P11137 1827 aaKnown RBP5.85□□□□□ -1.47
SNX1-205ENST00000559339 NCAPD2Q15021 1401 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 KDRP35968 1356 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 ERVV-2B6SEH9 535 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 HMOX1P09601 288 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 CABP4P57796 275 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 DDX10Q13206 875 aaKnown RBP5.85□□□□□ -1.47
SNX1-205ENST00000559339 AEBP1Q8IUX7 1158 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 SPON1Q9HCB6 807 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 TFCP2L1Q9NZI6 479 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 U3KPZ7 1027 aaPredicted RBP5.85□□□□□ -1.47
SNX1-205ENST00000559339 WNK3Q9BYP7 1800 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 TNS1Q9HBL0 1735 aaKnown RBP5.85□□□□□ -1.47
SNX1-205ENST00000559339 ANKRD26Q9UPS8 1709 aa5.85□□□□□ -1.47
SNX1-205ENST00000559339 PALLDQ8WX93 1383 aa5.84□□□□□ -1.47
SNX1-205ENST00000559339 U2AF1L5P0DN76 240 aaPredicted RBP5.84□□□□□ -1.47
SNX1-205ENST00000559339 PPP2R1AP30153 589 aa5.84□□□□□ -1.47
SNX1-205ENST00000559339 U2AF1Q01081 240 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNX1-205ENST00000559339 RALBP1Q15311 655 aa5.84□□□□□ -1.47
SNX1-205ENST00000559339 AKAP4Q5JQC9 854 aa5.84□□□□□ -1.47
SNX1-205ENST00000559339 SAMD1Q6SPF0 538 aaPredicted RBP5.84□□□□□ -1.47
SNX1-205ENST00000559339 PIGBQ92521 554 aa5.84□□□□□ -1.47
SNX1-205ENST00000559339 PNNQ9H307 717 aaKnown RBP5.84□□□□□ -1.47
SNX1-205ENST00000559339 ANO8Q9HCE9 1232 aaPredicted RBP5.84□□□□□ -1.47
SNX1-205ENST00000559339 PPP1R1BQ9UD71 204 aaPredicted RBP5.84□□□□□ -1.47
SNX1-205ENST00000559339 KAT6BQ8WYB5 2073 aa5.84□□□□□ -1.47
SNX1-205ENST00000559339 FLAD1Q8NFF5 587 aa5.83□□□□□ -1.48
SNX1-205ENST00000559339 GAS2L2Q8NHY3 880 aa5.83□□□□□ -1.48
SNX1-205ENST00000559339 LRRC4BQ9NT99 713 aa5.83□□□□□ -1.48
SNX1-205ENST00000559339 RGPD3A6NKT7 1758 aaPredicted RBP5.83□□□□□ -1.48
SNX1-205ENST00000559339 RGPD4Q7Z3J3 1758 aa5.83□□□□□ -1.48
SNX1-205ENST00000559339 NHSQ6T4R5 1651 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 LOC102724428A0A0B4J2F2 783 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 FCHSD2O94868 740 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 ATP6V1AP38606 617 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 KCNQ4P56696 695 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 SIK1P57059 783 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 NFATC2IPQ8NCF5 419 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 SLC16A10Q8TF71 515 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 RTF1Q92541 710 aaKnown RBP5.82□□□□□ -1.48
SNX1-205ENST00000559339 AKT1S1Q96B36 256 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 AK7Q96M32 723 aa5.82□□□□□ -1.48
SNX1-205ENST00000559339 MTFR1LQ9H019 292 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms