RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 PAPPAQ13219 1627 aa21.27■■□□□ 1
IRF9-204ENST00000559229 AKT1S1Q96B36 256 aa21.27■■□□□ 1
IRF9-204ENST00000559229 FHDC1Q9C0D6 1143 aaPredicted RBP21.27■■□□□ 1
IRF9-204ENST00000559229 KAT6BQ8WYB5 2073 aa21.27■□□□□ 0.99
IRF9-204ENST00000559229 MEGF6O75095 1541 aa21.25■□□□□ 0.99
IRF9-204ENST00000559229 ARXQ96QS3 562 aa21.25■□□□□ 0.99
IRF9-204ENST00000559229 MYOM1P52179 1685 aa21.24■□□□□ 0.99
IRF9-204ENST00000559229 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
IRF9-204ENST00000559229 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
IRF9-204ENST00000559229 SLC16A10Q8TF71 515 aa21.24■□□□□ 0.99
IRF9-204ENST00000559229 RAPGEF4Q8WZA2 1011 aa21.24■□□□□ 0.99
IRF9-204ENST00000559229 CARD14Q9BXL6 1004 aa21.24■□□□□ 0.99
IRF9-204ENST00000559229 INSRP06213 1382 aa21.23■□□□□ 0.99
IRF9-204ENST00000559229 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
IRF9-204ENST00000559229 USHBP1Q8N6Y0 703 aa21.23■□□□□ 0.99
IRF9-204ENST00000559229 NSD2O96028 1365 aa21.23■□□□□ 0.99
IRF9-204ENST00000559229 TATP17735 454 aaPredicted RBP21.22■□□□□ 0.99
IRF9-204ENST00000559229 FLT4P35916 1363 aa21.22■□□□□ 0.99
IRF9-204ENST00000559229 KCNQ4P56696 695 aa21.21■□□□□ 0.99
IRF9-204ENST00000559229 ZNF784Q8NCA9 323 aaPredicted RBP21.2■□□□□ 0.98
IRF9-204ENST00000559229 TFCP2L1Q9NZI6 479 aa21.2■□□□□ 0.98
IRF9-204ENST00000559229 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
IRF9-204ENST00000559229 PNPLA7Q6ZV29 1317 aa21.19■□□□□ 0.98
IRF9-204ENST00000559229 CLSPNQ9HAW4 1339 aa21.19■□□□□ 0.98
IRF9-204ENST00000559229 MAP3K5Q99683 1374 aa21.19■□□□□ 0.98
IRF9-204ENST00000559229 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
IRF9-204ENST00000559229 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
IRF9-204ENST00000559229 GOLGB1Q14789 3259 aaKnown RBP21.17■□□□□ 0.98
IRF9-204ENST00000559229 EMILIN1Q9Y6C2 1016 aa21.17■□□□□ 0.98
IRF9-204ENST00000559229 NSD3Q9BZ95 1437 aa21.17■□□□□ 0.98
IRF9-204ENST00000559229 SHANK3Q9BYB0 1731 aa21.16■□□□□ 0.98
IRF9-204ENST00000559229 PCDH11XQ9BZA7 1347 aa21.16■□□□□ 0.98
IRF9-204ENST00000559229 PCDH11YQ9BZA8 1340 aa21.16■□□□□ 0.98
IRF9-204ENST00000559229 POLD1P28340 1107 aa21.16■□□□□ 0.98
IRF9-204ENST00000559229 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
IRF9-204ENST00000559229 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
IRF9-204ENST00000559229 CYP27B1O15528 508 aa21.13■□□□□ 0.97
IRF9-204ENST00000559229 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
IRF9-204ENST00000559229 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
IRF9-204ENST00000559229 PPM1GO15355 546 aaPredicted RBP21.12■□□□□ 0.97
IRF9-204ENST00000559229 KIF20BQ96Q89 1820 aa21.12■□□□□ 0.97
IRF9-204ENST00000559229 LY75O60449 1722 aa21.12■□□□□ 0.97
IRF9-204ENST00000559229 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
IRF9-204ENST00000559229 QSER1Q2KHR3 1735 aa21.11■□□□□ 0.97
IRF9-204ENST00000559229 MPRIPQ6WCQ1 1025 aa21.1■□□□□ 0.97
IRF9-204ENST00000559229 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
IRF9-204ENST00000559229 NCAPD2Q15021 1401 aa21.08■□□□□ 0.97
IRF9-204ENST00000559229 NKX1-1Q15270 411 aaPredicted RBP21.08■□□□□ 0.97
IRF9-204ENST00000559229 POLKQ9UBT6 870 aa21.08■□□□□ 0.97
IRF9-204ENST00000559229 SPG7Q9UQ90 795 aa21.08■□□□□ 0.97
IRF9-204ENST00000559229 PALLDQ8WX93 1383 aa21.08■□□□□ 0.96
IRF9-204ENST00000559229 MSH5O43196 834 aa21.07■□□□□ 0.96
IRF9-204ENST00000559229 C1QTNF8P60827 252 aa21.07■□□□□ 0.96
IRF9-204ENST00000559229 GPR162Q16538 588 aa21.07■□□□□ 0.96
IRF9-204ENST00000559229 KLHL34Q8N239 644 aa21.07■□□□□ 0.96
IRF9-204ENST00000559229 SMARCC1Q92922 1105 aaPredicted RBP21.07■□□□□ 0.96
IRF9-204ENST00000559229 EYA1Q99502 592 aa21.07■□□□□ 0.96
IRF9-204ENST00000559229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
IRF9-204ENST00000559229 FLAD1Q8NFF5 587 aa21.06■□□□□ 0.96
IRF9-204ENST00000559229 COL24A1Q17RW2 1714 aa21.06■□□□□ 0.96
IRF9-204ENST00000559229 PIGBQ92521 554 aa21.05■□□□□ 0.96
IRF9-204ENST00000559229 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
IRF9-204ENST00000559229 EIF4G2P78344 907 aaKnown RBP eCLIP21.03■□□□□ 0.96
IRF9-204ENST00000559229 TUBGCP6Q96RT7 1819 aa21.03■□□□□ 0.96
IRF9-204ENST00000559229 NLGN2Q8NFZ4 835 aa21.02■□□□□ 0.96
IRF9-204ENST00000559229 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
IRF9-204ENST00000559229 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
IRF9-204ENST00000559229 TNNT2P45379 298 aaPredicted RBP21■□□□□ 0.95
IRF9-204ENST00000559229 MSL1Q68DK7 614 aa21■□□□□ 0.95
IRF9-204ENST00000559229 IFNL2Q8IZJ0 200 aa21■□□□□ 0.95
IRF9-204ENST00000559229 PKD1L3Q7Z443 1732 aa21■□□□□ 0.95
IRF9-204ENST00000559229 ANKRD26Q9UPS8 1709 aa21■□□□□ 0.95
IRF9-204ENST00000559229 CHD4Q14839 1912 aa21■□□□□ 0.95
IRF9-204ENST00000559229 PHKG2P15735 406 aa20.99■□□□□ 0.95
IRF9-204ENST00000559229 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
IRF9-204ENST00000559229 AK7Q96M32 723 aa20.99■□□□□ 0.95
IRF9-204ENST00000559229 PANK3Q9H999 370 aa20.99■□□□□ 0.95
IRF9-204ENST00000559229 TMOD3Q9NYL9 352 aa20.98■□□□□ 0.95
IRF9-204ENST00000559229 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
IRF9-204ENST00000559229 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
IRF9-204ENST00000559229 C5P01031 1676 aa20.97■□□□□ 0.95
IRF9-204ENST00000559229 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
IRF9-204ENST00000559229 SIK1P57059 783 aa20.97■□□□□ 0.95
IRF9-204ENST00000559229 TOGARAM1Q9Y4F4 1720 aa20.97■□□□□ 0.95
IRF9-204ENST00000559229 CD2APQ9Y5K6 639 aa20.96■□□□□ 0.95
IRF9-204ENST00000559229 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
IRF9-204ENST00000559229 AMIGO3Q86WK7 504 aa20.95■□□□□ 0.94
IRF9-204ENST00000559229 ASAP1Q9ULH1 1129 aa20.95■□□□□ 0.94
IRF9-204ENST00000559229 ITGB4P16144 1822 aa20.94■□□□□ 0.94
IRF9-204ENST00000559229 IGSF1Q8N6C5 1336 aa20.94■□□□□ 0.94
IRF9-204ENST00000559229 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
IRF9-204ENST00000559229 YBX3P16989 372 aaKnown RBP eCLIP20.93■□□□□ 0.94
IRF9-204ENST00000559229 SSFA2P28290 1259 aa20.93■□□□□ 0.94
IRF9-204ENST00000559229 LINC00116Q8NCU8 138 aa20.93■□□□□ 0.94
IRF9-204ENST00000559229 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
IRF9-204ENST00000559229 TAF1LQ8IZX4 1826 aa20.92■□□□□ 0.94
IRF9-204ENST00000559229 PHF14O94880 888 aa20.92■□□□□ 0.94
IRF9-204ENST00000559229 ATP6V1AP38606 617 aa20.92■□□□□ 0.94
IRF9-204ENST00000559229 CCER1Q8TC90 406 aaPredicted RBP20.92■□□□□ 0.94
IRF9-204ENST00000559229 ATG3Q9NT62 314 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms